RNA–Protein interactions for RNA: ENST00000502825.1

TMEM173-203, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-203ENST00000502825 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
TMEM173-203ENST00000502825 ABCC9O60706 1549 aa26.24■■□□□ 1.79
TMEM173-203ENST00000502825 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
TMEM173-203ENST00000502825 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
TMEM173-203ENST00000502825 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
TMEM173-203ENST00000502825 NACADO15069 1562 aa24.68■■□□□ 1.54
TMEM173-203ENST00000502825 DCAF8L2P0C7V8 631 aa24.57■■□□□ 1.52
TMEM173-203ENST00000502825 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
TMEM173-203ENST00000502825 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
TMEM173-203ENST00000502825 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
TMEM173-203ENST00000502825 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
TMEM173-203ENST00000502825 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
TMEM173-203ENST00000502825 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
TMEM173-203ENST00000502825 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
TMEM173-203ENST00000502825 SCRIBQ14160 1630 aa23.74■■□□□ 1.39
TMEM173-203ENST00000502825 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
TMEM173-203ENST00000502825 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
TMEM173-203ENST00000502825 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
TMEM173-203ENST00000502825 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
TMEM173-203ENST00000502825 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
TMEM173-203ENST00000502825 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
TMEM173-203ENST00000502825 CUX2O14529 1486 aa22.66■■□□□ 1.22
TMEM173-203ENST00000502825 SMARCA4P51532 1647 aa22.64■■□□□ 1.22
TMEM173-203ENST00000502825 ERCC6Q03468 1493 aa22.61■■□□□ 1.21
TMEM173-203ENST00000502825 SMARCA2P51531 1590 aa22.6■■□□□ 1.21
TMEM173-203ENST00000502825 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
TMEM173-203ENST00000502825 NESP48681 1621 aa22.53■■□□□ 1.2
TMEM173-203ENST00000502825 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
TMEM173-203ENST00000502825 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
TMEM173-203ENST00000502825 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
TMEM173-203ENST00000502825 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
TMEM173-203ENST00000502825 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
TMEM173-203ENST00000502825 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
TMEM173-203ENST00000502825 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
TMEM173-203ENST00000502825 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
TMEM173-203ENST00000502825 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
TMEM173-203ENST00000502825 WIZO95785 1651 aa22.08■■□□□ 1.13
TMEM173-203ENST00000502825 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
TMEM173-203ENST00000502825 WDR62O43379 1518 aa21.96■■□□□ 1.11
TMEM173-203ENST00000502825 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
TMEM173-203ENST00000502825 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
TMEM173-203ENST00000502825 FANCD2Q9BXW9 1451 aa21.84■■□□□ 1.09
TMEM173-203ENST00000502825 CFTRP13569 1480 aa21.83■■□□□ 1.08
TMEM173-203ENST00000502825 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
TMEM173-203ENST00000502825 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
TMEM173-203ENST00000502825 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
TMEM173-203ENST00000502825 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
TMEM173-203ENST00000502825 PRDM2Q13029 1718 aa21.57■■□□□ 1.04
TMEM173-203ENST00000502825 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
TMEM173-203ENST00000502825 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
TMEM173-203ENST00000502825 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
TMEM173-203ENST00000502825 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
TMEM173-203ENST00000502825 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
TMEM173-203ENST00000502825 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
TMEM173-203ENST00000502825 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
TMEM173-203ENST00000502825 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
TMEM173-203ENST00000502825 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
TMEM173-203ENST00000502825 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
TMEM173-203ENST00000502825 EIF4G3O43432 1585 aaKnown RBP21.29■■□□□ 1
TMEM173-203ENST00000502825 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
TMEM173-203ENST00000502825 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
TMEM173-203ENST00000502825 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.993e-9■■■■■ 36
TMEM173-203ENST00000502825 CHD1O14646 1710 aa21.19■□□□□ 0.98
TMEM173-203ENST00000502825 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
TMEM173-203ENST00000502825 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
TMEM173-203ENST00000502825 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.97
TMEM173-203ENST00000502825 SOGA1O94964 1423 aa21.1■□□□□ 0.97
TMEM173-203ENST00000502825 FBLN2P98095 1184 aa21.09■□□□□ 0.97
TMEM173-203ENST00000502825 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
TMEM173-203ENST00000502825 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
TMEM173-203ENST00000502825 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
TMEM173-203ENST00000502825 CUX1P39880 1505 aa21■□□□□ 0.95
TMEM173-203ENST00000502825 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
TMEM173-203ENST00000502825 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
TMEM173-203ENST00000502825 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
TMEM173-203ENST00000502825 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
TMEM173-203ENST00000502825 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
TMEM173-203ENST00000502825 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
TMEM173-203ENST00000502825 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
TMEM173-203ENST00000502825 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
TMEM173-203ENST00000502825 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
TMEM173-203ENST00000502825 GAPVD1Q14C86 1478 aa20.82■□□□□ 0.92
TMEM173-203ENST00000502825 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
TMEM173-203ENST00000502825 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
TMEM173-203ENST00000502825 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
TMEM173-203ENST00000502825 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
TMEM173-203ENST00000502825 ERCC6L2Q5T890 1561 aa20.64■□□□□ 0.9
TMEM173-203ENST00000502825 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
TMEM173-203ENST00000502825 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
TMEM173-203ENST00000502825 ADAMTS12P58397 1594 aa20.61■□□□□ 0.89
TMEM173-203ENST00000502825 NUP160Q12769 1436 aa20.61■□□□□ 0.89
TMEM173-203ENST00000502825 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
TMEM173-203ENST00000502825 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
TMEM173-203ENST00000502825 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
TMEM173-203ENST00000502825 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
TMEM173-203ENST00000502825 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
TMEM173-203ENST00000502825 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
TMEM173-203ENST00000502825 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
TMEM173-203ENST00000502825 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
TMEM173-203ENST00000502825 KIF13AQ9H1H9 1805 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms