RNA–Protein interactions for RNA: ENST00000502821.5

SPOCK3-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,749 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-206ENST00000502821 NISCHQ9Y2I1 1504 aa48.21■■■■■ 5.31
SPOCK3-206ENST00000502821 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
SPOCK3-206ENST00000502821 ZCCHC6Q5VYS8 1495 aaKnown RBP40.63■■■■■ 4.1
SPOCK3-206ENST00000502821 DCAF1Q9Y4B6 1507 aa39.96■■■■□ 3.99
SPOCK3-206ENST00000502821 SHROOM4Q9ULL8 1493 aa39.53■■■■□ 3.92
SPOCK3-206ENST00000502821 DCAF8L2P0C7V8 631 aa39.37■■■■□ 3.89
SPOCK3-206ENST00000502821 MYO15BQ96JP2 1530 aa39.28■■■■□ 3.88
SPOCK3-206ENST00000502821 ABCC9O60706 1549 aa38.84■■■■□ 3.81
SPOCK3-206ENST00000502821 NACADO15069 1562 aa38.78■■■■□ 3.8
SPOCK3-206ENST00000502821 SCRIBQ14160 1630 aa38.4■■■■□ 3.74
SPOCK3-206ENST00000502821 SUPT5HO00267 1087 aaKnown RBP38.34■■■■□ 3.73
SPOCK3-206ENST00000502821 RB1CC1Q8TDY2 1594 aa38.27■■■■□ 3.72
SPOCK3-206ENST00000502821 RSF1Q96T23 1441 aaPredicted RBP37.6■■■■□ 3.61
SPOCK3-206ENST00000502821 UNC13AQ9UPW8 1703 aa37.54■■■■□ 3.6
SPOCK3-206ENST00000502821 CECR2Q9BXF3 1484 aa37.36■■■■□ 3.57
SPOCK3-206ENST00000502821 MROH2BQ7Z745 1585 aa37.23■■■■□ 3.55
SPOCK3-206ENST00000502821 BAZ1AQ9NRL2 1556 aaPredicted RBP37.18■■■■□ 3.54
SPOCK3-206ENST00000502821 CHIC1Q5VXU3 224 aa37.14■■■■□ 3.54
SPOCK3-206ENST00000502821 BICRAQ9NZM4 1560 aa37.13■■■■□ 3.53
SPOCK3-206ENST00000502821 WIZO95785 1651 aa36.95■■■■□ 3.51
SPOCK3-206ENST00000502821 SMARCA4P51532 1647 aa36.93■■■■□ 3.5
SPOCK3-206ENST00000502821 PABPN1Q86U42 306 aaKnown RBP eCLIP36.7■■■■□ 3.47
SPOCK3-206ENST00000502821 TOP2AP11388 1531 aaKnown RBP36.63■■■■□ 3.45
SPOCK3-206ENST00000502821 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
SPOCK3-206ENST00000502821 EIF4G1Q04637 1599 aaKnown RBP36.31■■■■□ 3.4
SPOCK3-206ENST00000502821 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
SPOCK3-206ENST00000502821 CCDC88BA6NC98 1476 aa36.23■■■■□ 3.39
SPOCK3-206ENST00000502821 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
SPOCK3-206ENST00000502821 TRIM41Q8WV44 630 aa36.07■■■■□ 3.36
SPOCK3-206ENST00000502821 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
SPOCK3-206ENST00000502821 HMGXB3Q12766 1538 aa35.8■■■■□ 3.32
SPOCK3-206ENST00000502821 NCAPD3P42695 1498 aa35.79■■■■□ 3.32
SPOCK3-206ENST00000502821 LOC105371045A0A1W2PR82 267 aa35.65■■■■□ 3.3
SPOCK3-206ENST00000502821 ABCC8Q09428 1581 aa35.61■■■■□ 3.29
SPOCK3-206ENST00000502821 WRNQ14191 1432 aaPredicted RBP eCLIP35.36■■■■□ 3.25
SPOCK3-206ENST00000502821 FAM9AQ8IZU1 332 aaPredicted RBP35.33■■■■□ 3.25
SPOCK3-206ENST00000502821 EEA1Q15075 1411 aa35.24■■■■□ 3.23
SPOCK3-206ENST00000502821 CC2D2AQ9P2K1 1620 aa35.23■■■■□ 3.23
SPOCK3-206ENST00000502821 SYNJ1O43426 1573 aa35.2■■■■□ 3.23
SPOCK3-206ENST00000502821 CFTRP13569 1480 aa35.15■■■■□ 3.22
SPOCK3-206ENST00000502821 SOGA1O94964 1423 aa35.08■■■■□ 3.21
SPOCK3-206ENST00000502821 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
SPOCK3-206ENST00000502821 PRDM2Q13029 1718 aa35.04■■■■□ 3.2
SPOCK3-206ENST00000502821 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
SPOCK3-206ENST00000502821 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
SPOCK3-206ENST00000502821 CSRNP3Q8WYN3 585 aa34.9■■■■□ 3.18
SPOCK3-206ENST00000502821 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
SPOCK3-206ENST00000502821 CUX1P39880 1505 aa34.78■■■■□ 3.16
SPOCK3-206ENST00000502821 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.15
SPOCK3-206ENST00000502821 KIF21BO75037 1637 aa34.74■■■■□ 3.15
SPOCK3-206ENST00000502821 GOLGA3Q08378 1498 aa34.72■■■■□ 3.15
SPOCK3-206ENST00000502821 EHMT2Q96KQ7 1210 aa34.7■■■■□ 3.15
SPOCK3-206ENST00000502821 CEP164Q9UPV0 1460 aa34.67■■■■□ 3.14
SPOCK3-206ENST00000502821 PCGF6Q9BYE7 350 aa34.64■■■■□ 3.14
SPOCK3-206ENST00000502821 TRIM26Q12899 539 aaPredicted RBP34.59■■■■□ 3.13
SPOCK3-206ENST00000502821 CEP162Q5TB80 1403 aa34.55■■■■□ 3.12
SPOCK3-206ENST00000502821 LAMC3Q9Y6N6 1575 aa34.47■■■■□ 3.11
SPOCK3-206ENST00000502821 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
SPOCK3-206ENST00000502821 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
SPOCK3-206ENST00000502821 ERICH3Q5RHP9 1530 aa34.41■■■■□ 3.1
SPOCK3-206ENST00000502821 UBTFP17480 764 aaKnown RBP34.41■■■■□ 3.1
SPOCK3-206ENST00000502821 PRXQ9BXM0 1461 aa34.39■■■■□ 3.1
SPOCK3-206ENST00000502821 RAPGEF2Q9Y4G8 1499 aa34.35■■■■□ 3.09
SPOCK3-206ENST00000502821 DNMBPQ6XZF7 1577 aa34.32■■■■□ 3.08
SPOCK3-206ENST00000502821 NESP48681 1621 aa34.3■■■■□ 3.08
SPOCK3-206ENST00000502821 FGD5Q6ZNL6 1462 aa34.29■■■■□ 3.08
SPOCK3-206ENST00000502821 HRCP23327 699 aa34.22■■■■□ 3.07
SPOCK3-206ENST00000502821 TOPBP1Q92547 1522 aa34.18■■■■□ 3.06
SPOCK3-206ENST00000502821 CLIP1P30622 1438 aa34.16■■■■□ 3.06
SPOCK3-206ENST00000502821 CUX2O14529 1486 aa34.16■■■■□ 3.06
SPOCK3-206ENST00000502821 PDS5BQ9NTI5 1447 aa34.14■■■■□ 3.06
SPOCK3-206ENST00000502821 ABCA10Q8WWZ4 1543 aa34.06■■■■□ 3.04
SPOCK3-206ENST00000502821 IGF1RP08069 1367 aa34.06■■■■□ 3.04
SPOCK3-206ENST00000502821 POLA1P09884 1462 aaPredicted RBP34.05■■■■□ 3.04
SPOCK3-206ENST00000502821 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
SPOCK3-206ENST00000502821 URB2Q14146 1524 aaKnown RBP34.02■■■■□ 3.04
SPOCK3-206ENST00000502821 VPS8Q8N3P4 1428 aa33.98■■■■□ 3.03
SPOCK3-206ENST00000502821 KIF21AQ7Z4S6 1674 aa33.94■■■■□ 3.02
SPOCK3-206ENST00000502821 WDR97A6NE52 1622 aa33.91■■■■□ 3.02
SPOCK3-206ENST00000502821 RAD54L2Q9Y4B4 1467 aa33.9■■■■□ 3.02
SPOCK3-206ENST00000502821 CARMIL1Q5VZK9 1371 aa33.88■■■■□ 3.01
SPOCK3-206ENST00000502821 PPARGC1BQ86YN6 1023 aaKnown RBP33.82■■■■□ 3
SPOCK3-206ENST00000502821 CUL7Q14999 1698 aa33.79■■■■□ 3
SPOCK3-206ENST00000502821 ARAP1Q96P48 1450 aa33.78■■■■□ 3
SPOCK3-206ENST00000502821 ABCA5Q8WWZ7 1642 aa33.73■■■□□ 2.99
SPOCK3-206ENST00000502821 MRC2Q9UBG0 1479 aa33.67■■■□□ 2.98
SPOCK3-206ENST00000502821 ARHGAP35Q9NRY4 1499 aa33.66■■■□□ 2.98
SPOCK3-206ENST00000502821 TARBP1Q13395 1621 aaKnown RBP33.66■■■□□ 2.98
SPOCK3-206ENST00000502821 GAPVD1Q14C86 1478 aa33.58■■■□□ 2.97
SPOCK3-206ENST00000502821 ZEB1P37275 1124 aaPredicted RBP33.57■■■□□ 2.96
SPOCK3-206ENST00000502821 APLP2Q06481 763 aa33.55■■■□□ 2.96
SPOCK3-206ENST00000502821 RANGAP1P46060 587 aaPredicted RBP33.54■■■□□ 2.96
SPOCK3-206ENST00000502821 WDR62O43379 1518 aa33.51■■■□□ 2.96
SPOCK3-206ENST00000502821 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
SPOCK3-206ENST00000502821 CTTNBP2Q8WZ74 1663 aa33.48■■■□□ 2.95
SPOCK3-206ENST00000502821 EFCAB5A4FU69 1503 aa33.42■■■□□ 2.94
SPOCK3-206ENST00000502821 TTBK1Q5TCY1 1321 aaPredicted RBP33.39■■■□□ 2.94
SPOCK3-206ENST00000502821 MAP3K1Q13233 1512 aa33.38■■■□□ 2.93
SPOCK3-206ENST00000502821 PBRM1Q86U86 1689 aa33.37■■■□□ 2.93
SPOCK3-206ENST00000502821 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms