RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
LINC00955-201ENST00000502775 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
LINC00955-201ENST00000502775 ABCC9O60706 1549 aa29.04■■■□□ 2.24
LINC00955-201ENST00000502775 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
LINC00955-201ENST00000502775 NACADO15069 1562 aa27.51■■□□□ 1.99
LINC00955-201ENST00000502775 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
LINC00955-201ENST00000502775 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
LINC00955-201ENST00000502775 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
LINC00955-201ENST00000502775 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
LINC00955-201ENST00000502775 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
LINC00955-201ENST00000502775 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
LINC00955-201ENST00000502775 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
LINC00955-201ENST00000502775 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
LINC00955-201ENST00000502775 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
LINC00955-201ENST00000502775 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
LINC00955-201ENST00000502775 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
LINC00955-201ENST00000502775 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
LINC00955-201ENST00000502775 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.79
LINC00955-201ENST00000502775 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
LINC00955-201ENST00000502775 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
LINC00955-201ENST00000502775 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
LINC00955-201ENST00000502775 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
LINC00955-201ENST00000502775 HMGXB3Q12766 1538 aa25.2■■□□□ 1.62
LINC00955-201ENST00000502775 CUX2O14529 1486 aa25.16■■□□□ 1.62
LINC00955-201ENST00000502775 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
LINC00955-201ENST00000502775 DNAJC5Q9H3Z4 198 aa25.13■■□□□ 1.61
LINC00955-201ENST00000502775 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
LINC00955-201ENST00000502775 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
LINC00955-201ENST00000502775 PEG3Q9GZU2 1588 aa25■■□□□ 1.59
LINC00955-201ENST00000502775 NESP48681 1621 aa24.9■■□□□ 1.58
LINC00955-201ENST00000502775 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
LINC00955-201ENST00000502775 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
LINC00955-201ENST00000502775 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
LINC00955-201ENST00000502775 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
LINC00955-201ENST00000502775 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
LINC00955-201ENST00000502775 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
LINC00955-201ENST00000502775 WIZO95785 1651 aa24.56■■□□□ 1.52
LINC00955-201ENST00000502775 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
LINC00955-201ENST00000502775 WDR62O43379 1518 aa24.4■■□□□ 1.5
LINC00955-201ENST00000502775 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
LINC00955-201ENST00000502775 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
LINC00955-201ENST00000502775 FANCD2Q9BXW9 1451 aa24.3■■□□□ 1.48
LINC00955-201ENST00000502775 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
LINC00955-201ENST00000502775 CFTRP13569 1480 aa24.27■■□□□ 1.48
LINC00955-201ENST00000502775 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
LINC00955-201ENST00000502775 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
LINC00955-201ENST00000502775 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
LINC00955-201ENST00000502775 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
LINC00955-201ENST00000502775 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
LINC00955-201ENST00000502775 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
LINC00955-201ENST00000502775 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
LINC00955-201ENST00000502775 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
LINC00955-201ENST00000502775 DNMBPQ6XZF7 1577 aa23.77■■□□□ 1.4
LINC00955-201ENST00000502775 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
LINC00955-201ENST00000502775 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
LINC00955-201ENST00000502775 RIMBP3CA6NJZ7 1639 aa23.65■■□□□ 1.38
LINC00955-201ENST00000502775 RIMBP3BA6NNM3 1639 aa23.65■■□□□ 1.38
LINC00955-201ENST00000502775 RIMBP3Q9UFD9 1639 aa23.65■■□□□ 1.38
LINC00955-201ENST00000502775 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
LINC00955-201ENST00000502775 ARHGEF11O15085 1522 aa23.57■■□□□ 1.36
LINC00955-201ENST00000502775 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
LINC00955-201ENST00000502775 CHD1O14646 1710 aa23.54■■□□□ 1.36
LINC00955-201ENST00000502775 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
LINC00955-201ENST00000502775 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
LINC00955-201ENST00000502775 SOGA1O94964 1423 aa23.45■■□□□ 1.34
LINC00955-201ENST00000502775 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
LINC00955-201ENST00000502775 FBLN2P98095 1184 aa23.41■■□□□ 1.34
LINC00955-201ENST00000502775 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
LINC00955-201ENST00000502775 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
LINC00955-201ENST00000502775 CUX1P39880 1505 aa23.36■■□□□ 1.33
LINC00955-201ENST00000502775 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
LINC00955-201ENST00000502775 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
LINC00955-201ENST00000502775 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
LINC00955-201ENST00000502775 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
LINC00955-201ENST00000502775 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
LINC00955-201ENST00000502775 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
LINC00955-201ENST00000502775 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
LINC00955-201ENST00000502775 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
LINC00955-201ENST00000502775 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
LINC00955-201ENST00000502775 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
LINC00955-201ENST00000502775 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
LINC00955-201ENST00000502775 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
LINC00955-201ENST00000502775 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
LINC00955-201ENST00000502775 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
LINC00955-201ENST00000502775 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
LINC00955-201ENST00000502775 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
LINC00955-201ENST00000502775 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
LINC00955-201ENST00000502775 TOP2BQ02880 1626 aa23.01■■□□□ 1.27
LINC00955-201ENST00000502775 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
LINC00955-201ENST00000502775 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
LINC00955-201ENST00000502775 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
LINC00955-201ENST00000502775 NUP160Q12769 1436 aa22.91■■□□□ 1.26
LINC00955-201ENST00000502775 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
LINC00955-201ENST00000502775 CEP170Q5SW79 1584 aa22.89■■□□□ 1.25
LINC00955-201ENST00000502775 SHROOM2Q13796 1616 aa22.83■■□□□ 1.25
LINC00955-201ENST00000502775 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
LINC00955-201ENST00000502775 PRG4Q92954 1404 aaPredicted RBP22.67■■□□□ 1.22
LINC00955-201ENST00000502775 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
LINC00955-201ENST00000502775 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
LINC00955-201ENST00000502775 CUL7Q14999 1698 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms