RNA–Protein interactions for RNA: ENST00000502741.5

SPOCK3-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,032 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-205ENST00000502741 NISCHQ9Y2I1 1504 aa56.01■■■■■ 6.56
SPOCK3-205ENST00000502741 ABCC9O60706 1549 aa50.87■■■■■ 5.73
SPOCK3-205ENST00000502741 CCDC180Q9P1Z9 1646 aa50.4■■■■■ 5.66
SPOCK3-205ENST00000502741 RB1CC1Q8TDY2 1594 aa48.18■■■■■ 5.3
SPOCK3-205ENST00000502741 DNAJC5BQ9UF47 199 aa48.1■■■■■ 5.29
SPOCK3-205ENST00000502741 NACADO15069 1562 aa47.75■■■■■ 5.24
SPOCK3-205ENST00000502741 DCAF8L2P0C7V8 631 aa47.44■■■■■ 5.18
SPOCK3-205ENST00000502741 PABPN1Q86U42 306 aaKnown RBP eCLIP47.3■■■■■ 5.16
SPOCK3-205ENST00000502741 UNC13AQ9UPW8 1703 aa47.13■■■■■ 5.14
SPOCK3-205ENST00000502741 MYO15BQ96JP2 1530 aa46.95■■■■■ 5.11
SPOCK3-205ENST00000502741 BICRAQ9NZM4 1560 aa46.85■■■■■ 5.09
SPOCK3-205ENST00000502741 ZCCHC6Q5VYS8 1495 aaKnown RBP46.33■■■■■ 5.01
SPOCK3-205ENST00000502741 DCAF1Q9Y4B6 1507 aa46.21■■■■■ 4.99
SPOCK3-205ENST00000502741 SHROOM4Q9ULL8 1493 aa46.09■■■■■ 4.97
SPOCK3-205ENST00000502741 SCRIBQ14160 1630 aa45.95■■■■■ 4.95
SPOCK3-205ENST00000502741 CC2D2AQ9P2K1 1620 aa45.91■■■■■ 4.94
SPOCK3-205ENST00000502741 CECR2Q9BXF3 1484 aa45.84■■■■■ 4.93
SPOCK3-205ENST00000502741 EIF4G1Q04637 1599 aaKnown RBP45.71■■■■■ 4.91
SPOCK3-205ENST00000502741 DNAJC5Q9H3Z4 198 aa44.41■■■■■ 4.7
SPOCK3-205ENST00000502741 NCAPD3P42695 1498 aa44.1■■■■■ 4.65
SPOCK3-205ENST00000502741 CUX2O14529 1486 aa43.96■■■■■ 4.63
SPOCK3-205ENST00000502741 ATAD2BQ9ULI0 1458 aa43.93■■■■■ 4.62
SPOCK3-205ENST00000502741 ERCC6Q03468 1493 aa43.91■■■■■ 4.62
SPOCK3-205ENST00000502741 SMARCA4P51532 1647 aa43.78■■■■■ 4.6
SPOCK3-205ENST00000502741 SMARCA2P51531 1590 aa43.75■■■■■ 4.59
SPOCK3-205ENST00000502741 HMGXB3Q12766 1538 aa43.73■■■■■ 4.59
SPOCK3-205ENST00000502741 NESP48681 1621 aa43.59■■■■■ 4.57
SPOCK3-205ENST00000502741 BAZ1AQ9NRL2 1556 aaPredicted RBP43.48■■■■■ 4.55
SPOCK3-205ENST00000502741 BAZ1BQ9UIG0 1483 aaKnown RBP43.47■■■■■ 4.55
SPOCK3-205ENST00000502741 PEG3Q9GZU2 1588 aa43.34■■■■■ 4.53
SPOCK3-205ENST00000502741 THOC2Q8NI27 1593 aaKnown RBP43.21■■■■■ 4.51
SPOCK3-205ENST00000502741 MROH2BQ7Z745 1585 aa43.18■■■■■ 4.5
SPOCK3-205ENST00000502741 LAMC3Q9Y6N6 1575 aa43.16■■■■■ 4.5
SPOCK3-205ENST00000502741 KIF21AQ7Z4S6 1674 aa42.99■■■■■ 4.47
SPOCK3-205ENST00000502741 PDS5BQ9NTI5 1447 aa42.92■■■■■ 4.46
SPOCK3-205ENST00000502741 CADPSQ9ULU8 1353 aa42.75■■■■■ 4.43
SPOCK3-205ENST00000502741 WIZO95785 1651 aa42.63■■■■■ 4.42
SPOCK3-205ENST00000502741 MRC2Q9UBG0 1479 aa42.61■■■■■ 4.41
SPOCK3-205ENST00000502741 WDR62O43379 1518 aa42.51■■■■■ 4.4
SPOCK3-205ENST00000502741 CEP164Q9UPV0 1460 aa42.34■■■■■ 4.37
SPOCK3-205ENST00000502741 TRIM41Q8WV44 630 aa42.32■■■■■ 4.37
SPOCK3-205ENST00000502741 FANCD2Q9BXW9 1451 aa42.27■■■■■ 4.36
SPOCK3-205ENST00000502741 CFTRP13569 1480 aa42.18■■■■■ 4.34
SPOCK3-205ENST00000502741 RSF1Q96T23 1441 aaPredicted RBP42.12■■■■■ 4.33
SPOCK3-205ENST00000502741 TOP2AP11388 1531 aaKnown RBP42.05■■■■■ 4.32
SPOCK3-205ENST00000502741 URB2Q14146 1524 aaKnown RBP41.98■■■■■ 4.31
SPOCK3-205ENST00000502741 OSCARQ8IYS5 282 aa41.87■■■■■ 4.29
SPOCK3-205ENST00000502741 PRDM2Q13029 1718 aa41.71■■■■■ 4.27
SPOCK3-205ENST00000502741 CCDC88BA6NC98 1476 aa41.6■■■■■ 4.25
SPOCK3-205ENST00000502741 ZNF608Q9ULD9 1512 aaPredicted RBP41.54■■■■■ 4.24
SPOCK3-205ENST00000502741 IFT140Q96RY7 1462 aa41.51■■■■■ 4.24
SPOCK3-205ENST00000502741 TOPBP1Q92547 1522 aa41.44■■■■■ 4.22
SPOCK3-205ENST00000502741 RIMBP3CA6NJZ7 1639 aa41.42■■■■■ 4.22
SPOCK3-205ENST00000502741 RIMBP3BA6NNM3 1639 aa41.42■■■■■ 4.22
SPOCK3-205ENST00000502741 RIMBP3Q9UFD9 1639 aa41.42■■■■■ 4.22
SPOCK3-205ENST00000502741 EIF4G3O43432 1585 aaKnown RBP41.26■■■■■ 4.2
SPOCK3-205ENST00000502741 ABCC8Q09428 1581 aa41.25■■■■■ 4.19
SPOCK3-205ENST00000502741 ARHGEF11O15085 1522 aa41.24■■■■■ 4.19
SPOCK3-205ENST00000502741 DNMBPQ6XZF7 1577 aa41.24■■■■■ 4.19
SPOCK3-205ENST00000502741 TARBP1Q13395 1621 aaKnown RBP41.11■■■■■ 4.17
SPOCK3-205ENST00000502741 AQRO60306 1485 aaKnown RBP eCLIP41.09■■■■■ 4.17
SPOCK3-205ENST00000502741 CHD1O14646 1710 aa41.04■■■■■ 4.16
SPOCK3-205ENST00000502741 POLA1P09884 1462 aaPredicted RBP40.99■■■■■ 4.15
SPOCK3-205ENST00000502741 CYB5RLQ6IPT4 315 aa40.96■■■■■ 4.15
SPOCK3-205ENST00000502741 FBLN2P98095 1184 aa40.88■■■■■ 4.13
SPOCK3-205ENST00000502741 RAD54L2Q9Y4B4 1467 aa40.87■■■■■ 4.13
SPOCK3-205ENST00000502741 ARAP1Q96P48 1450 aa40.83■■■■■ 4.13
SPOCK3-205ENST00000502741 SOGA1O94964 1423 aa40.77■■■■■ 4.12
SPOCK3-205ENST00000502741 TDRD9Q8NDG6 1382 aaKnown RBP40.77■■■■■ 4.12
SPOCK3-205ENST00000502741 FGD5Q6ZNL6 1462 aa40.68■■■■■ 4.1
SPOCK3-205ENST00000502741 SNAPC4Q5SXM2 1469 aa40.65■■■■■ 4.1
SPOCK3-205ENST00000502741 TRHP20396 242 aaPredicted RBP40.61■■■■■ 4.09
SPOCK3-205ENST00000502741 WDR97A6NE52 1622 aa40.6■■■■■ 4.09
SPOCK3-205ENST00000502741 CUX1P39880 1505 aa40.59■■■■■ 4.09
SPOCK3-205ENST00000502741 CLASP1Q7Z460 1538 aa40.56■■■■■ 4.08
SPOCK3-205ENST00000502741 MAGI1Q96QZ7 1491 aaPredicted RBP40.51■■■■■ 4.07
SPOCK3-205ENST00000502741 CHMP7Q8WUX9 453 aaPredicted RBP40.49■■■■■ 4.07
SPOCK3-205ENST00000502741 GRIN2BQ13224 1484 aa40.47■■■■■ 4.07
SPOCK3-205ENST00000502741 SYNJ1O43426 1573 aa40.46■■■■■ 4.07
SPOCK3-205ENST00000502741 SYNJ2O15056 1496 aa40.38■■■■■ 4.05
SPOCK3-205ENST00000502741 PBRM1Q86U86 1689 aa40.29■■■■■ 4.04
SPOCK3-205ENST00000502741 GAPVD1Q14C86 1478 aa40.28■■■■■ 4.04
SPOCK3-205ENST00000502741 ABCA10Q8WWZ4 1543 aa40.18■■■■■ 4.02
SPOCK3-205ENST00000502741 ABCA5Q8WWZ7 1642 aa40.16■■■■■ 4.02
SPOCK3-205ENST00000502741 GRIN2AQ12879 1464 aa39.96■■■■□ 3.99
SPOCK3-205ENST00000502741 SUPT5HO00267 1087 aaKnown RBP39.96■■■■□ 3.99
SPOCK3-205ENST00000502741 ERCC6L2Q5T890 1561 aa39.93■■■■□ 3.98
SPOCK3-205ENST00000502741 WRNQ14191 1432 aaPredicted RBP eCLIP39.92■■■■□ 3.98
SPOCK3-205ENST00000502741 ADAMTS12P58397 1594 aa39.9■■■■□ 3.98
SPOCK3-205ENST00000502741 CEP170Q5SW79 1584 aa39.86■■■■□ 3.97
SPOCK3-205ENST00000502741 NUP160Q12769 1436 aa39.84■■■■□ 3.97
SPOCK3-205ENST00000502741 BIVM-ERCC5R4GMW8 1640 aa39.8■■■■□ 3.96
SPOCK3-205ENST00000502741 TOP2BQ02880 1626 aa39.8■■■■□ 3.96
SPOCK3-205ENST00000502741 FHAD1B1AJZ9 1412 aa39.74■■■■□ 3.95
SPOCK3-205ENST00000502741 AEBP2Q6ZN18 517 aaPredicted RBP39.71■■■■□ 3.95
SPOCK3-205ENST00000502741 SHROOM2Q13796 1616 aa39.71■■■■□ 3.95
SPOCK3-205ENST00000502741 ERICH3Q5RHP9 1530 aa39.65■■■■□ 3.94
SPOCK3-205ENST00000502741 PRG4Q92954 1404 aaPredicted RBP39.49■■■■□ 3.91
SPOCK3-205ENST00000502741 JPH4Q96JJ6 628 aa39.41■■■■□ 3.9
SPOCK3-205ENST00000502741 KIF13AQ9H1H9 1805 aa39.41■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms