RNA–Protein interactions for RNA: ENST00000502622.1

HTR3A-204, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 5

Gene HTR3A, Length 906 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-204ENST00000502622 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
HTR3A-204ENST00000502622 CCDC180Q9P1Z9 1646 aa24.44■■□□□ 1.5
HTR3A-204ENST00000502622 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
HTR3A-204ENST00000502622 ABCC9O60706 1549 aa23.13■■□□□ 1.29
HTR3A-204ENST00000502622 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
HTR3A-204ENST00000502622 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
HTR3A-204ENST00000502622 NACADO15069 1562 aa22.67■■□□□ 1.22
HTR3A-204ENST00000502622 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
HTR3A-204ENST00000502622 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
HTR3A-204ENST00000502622 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
HTR3A-204ENST00000502622 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
HTR3A-204ENST00000502622 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
HTR3A-204ENST00000502622 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
HTR3A-204ENST00000502622 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
HTR3A-204ENST00000502622 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
HTR3A-204ENST00000502622 CECR2Q9BXF3 1484 aa21.44■■□□□ 1.02
HTR3A-204ENST00000502622 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
HTR3A-204ENST00000502622 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
HTR3A-204ENST00000502622 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
HTR3A-204ENST00000502622 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
HTR3A-204ENST00000502622 WIZO95785 1651 aa21.22■□□□□ 0.99
HTR3A-204ENST00000502622 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
HTR3A-204ENST00000502622 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
HTR3A-204ENST00000502622 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
HTR3A-204ENST00000502622 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
HTR3A-204ENST00000502622 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
HTR3A-204ENST00000502622 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
HTR3A-204ENST00000502622 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
HTR3A-204ENST00000502622 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
HTR3A-204ENST00000502622 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
HTR3A-204ENST00000502622 NCAPD3P42695 1498 aa20.83■□□□□ 0.93
HTR3A-204ENST00000502622 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
HTR3A-204ENST00000502622 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
HTR3A-204ENST00000502622 CFTRP13569 1480 aa20.3■□□□□ 0.84
HTR3A-204ENST00000502622 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
HTR3A-204ENST00000502622 NESP48681 1621 aa20.24■□□□□ 0.83
HTR3A-204ENST00000502622 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
HTR3A-204ENST00000502622 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
HTR3A-204ENST00000502622 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
HTR3A-204ENST00000502622 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
HTR3A-204ENST00000502622 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
HTR3A-204ENST00000502622 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
HTR3A-204ENST00000502622 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
HTR3A-204ENST00000502622 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
HTR3A-204ENST00000502622 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
HTR3A-204ENST00000502622 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
HTR3A-204ENST00000502622 CUX1P39880 1505 aa19.97■□□□□ 0.79
HTR3A-204ENST00000502622 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
HTR3A-204ENST00000502622 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
HTR3A-204ENST00000502622 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
HTR3A-204ENST00000502622 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
HTR3A-204ENST00000502622 URB2Q14146 1524 aaKnown RBP19.89■□□□□ 0.77
HTR3A-204ENST00000502622 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
HTR3A-204ENST00000502622 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
HTR3A-204ENST00000502622 ERCC6Q03468 1493 aa19.82■□□□□ 0.76
HTR3A-204ENST00000502622 WDR62O43379 1518 aa19.81■□□□□ 0.76
HTR3A-204ENST00000502622 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
HTR3A-204ENST00000502622 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
HTR3A-204ENST00000502622 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
HTR3A-204ENST00000502622 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
HTR3A-204ENST00000502622 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
HTR3A-204ENST00000502622 CUX2O14529 1486 aa19.61■□□□□ 0.73
HTR3A-204ENST00000502622 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
HTR3A-204ENST00000502622 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
HTR3A-204ENST00000502622 SOGA1O94964 1423 aa19.59■□□□□ 0.73
HTR3A-204ENST00000502622 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
HTR3A-204ENST00000502622 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
HTR3A-204ENST00000502622 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
HTR3A-204ENST00000502622 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
HTR3A-204ENST00000502622 EEA1Q15075 1411 aa19.51■□□□□ 0.71
HTR3A-204ENST00000502622 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
HTR3A-204ENST00000502622 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
HTR3A-204ENST00000502622 KIF21BO75037 1637 aa19.43■□□□□ 0.7
HTR3A-204ENST00000502622 ZNF608Q9ULD9 1512 aaPredicted RBP19.43■□□□□ 0.7
HTR3A-204ENST00000502622 CUL7Q14999 1698 aa19.43■□□□□ 0.7
HTR3A-204ENST00000502622 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
HTR3A-204ENST00000502622 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
HTR3A-204ENST00000502622 ERICH3Q5RHP9 1530 aa19.38■□□□□ 0.69
HTR3A-204ENST00000502622 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
HTR3A-204ENST00000502622 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
HTR3A-204ENST00000502622 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
HTR3A-204ENST00000502622 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
HTR3A-204ENST00000502622 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
HTR3A-204ENST00000502622 IGF1RP08069 1367 aa19.29■□□□□ 0.68
HTR3A-204ENST00000502622 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
HTR3A-204ENST00000502622 CTTNBP2Q8WZ74 1663 aa19.27■□□□□ 0.68
HTR3A-204ENST00000502622 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
HTR3A-204ENST00000502622 RAPGEF2Q9Y4G8 1499 aa19.25■□□□□ 0.67
HTR3A-204ENST00000502622 CHD1O14646 1710 aa19.25■□□□□ 0.67
HTR3A-204ENST00000502622 SNAPC4Q5SXM2 1469 aa19.23■□□□□ 0.67
HTR3A-204ENST00000502622 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
HTR3A-204ENST00000502622 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
HTR3A-204ENST00000502622 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
HTR3A-204ENST00000502622 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
HTR3A-204ENST00000502622 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
HTR3A-204ENST00000502622 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
HTR3A-204ENST00000502622 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
HTR3A-204ENST00000502622 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
HTR3A-204ENST00000502622 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
HTR3A-204ENST00000502622 IQGAP2Q13576 1575 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms