RNA–Protein interactions for RNA: ENST00000502498.5

CANX-204, Transcript of calnexin, humanhuman

TSL 4

Gene CANX, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-204ENST00000502498 NISCHQ9Y2I1 1504 aa45.53■■■■■ 4.88
CANX-204ENST00000502498 ABCC9O60706 1549 aa41.64■■■■■ 4.26
CANX-204ENST00000502498 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
CANX-204ENST00000502498 DNAJC5BQ9UF47 199 aa39.52■■■■□ 3.92
CANX-204ENST00000502498 RB1CC1Q8TDY2 1594 aa39.33■■■■□ 3.89
CANX-204ENST00000502498 NACADO15069 1562 aa38.94■■■■□ 3.82
CANX-204ENST00000502498 DCAF8L2P0C7V8 631 aa38.76■■■■□ 3.8
CANX-204ENST00000502498 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
CANX-204ENST00000502498 UNC13AQ9UPW8 1703 aa38.36■■■■□ 3.73
CANX-204ENST00000502498 BICRAQ9NZM4 1560 aa38.21■■■■□ 3.71
CANX-204ENST00000502498 MYO15BQ96JP2 1530 aa38.21■■■■□ 3.71
CANX-204ENST00000502498 ZCCHC6Q5VYS8 1495 aaKnown RBP37.63■■■■□ 3.61
CANX-204ENST00000502498 SHROOM4Q9ULL8 1493 aa37.63■■■■□ 3.61
CANX-204ENST00000502498 CECR2Q9BXF3 1484 aa37.55■■■■□ 3.6
CANX-204ENST00000502498 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
CANX-204ENST00000502498 CC2D2AQ9P2K1 1620 aa37.53■■■■□ 3.6
CANX-204ENST00000502498 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
CANX-204ENST00000502498 EIF4G1Q04637 1599 aaKnown RBP37.34■■■■□ 3.57
CANX-204ENST00000502498 DNAJC5Q9H3Z4 198 aa36.64■■■■□ 3.46
CANX-204ENST00000502498 CUX2O14529 1486 aa36.05■■■■□ 3.36
CANX-204ENST00000502498 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
CANX-204ENST00000502498 NCAPD3P42695 1498 aa35.98■■■■□ 3.35
CANX-204ENST00000502498 ATAD2BQ9ULI0 1458 aa35.81■■■■□ 3.32
CANX-204ENST00000502498 SMARCA2P51531 1590 aa35.66■■■■□ 3.3
CANX-204ENST00000502498 HMGXB3Q12766 1538 aa35.64■■■■□ 3.3
CANX-204ENST00000502498 NESP48681 1621 aa35.61■■■■□ 3.29
CANX-204ENST00000502498 SMARCA4P51532 1647 aa35.61■■■■□ 3.29
CANX-204ENST00000502498 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
CANX-204ENST00000502498 BAZ1AQ9NRL2 1556 aaPredicted RBP35.37■■■■□ 3.25
CANX-204ENST00000502498 THOC2Q8NI27 1593 aaKnown RBP35.3■■■■□ 3.24
CANX-204ENST00000502498 PEG3Q9GZU2 1588 aa35.25■■■■□ 3.23
CANX-204ENST00000502498 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
CANX-204ENST00000502498 MROH2BQ7Z745 1585 aa35.1■■■■□ 3.21
CANX-204ENST00000502498 PDS5BQ9NTI5 1447 aa35.08■■■■□ 3.21
CANX-204ENST00000502498 KIF21AQ7Z4S6 1674 aa35.06■■■■□ 3.2
CANX-204ENST00000502498 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
CANX-204ENST00000502498 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
CANX-204ENST00000502498 MRC2Q9UBG0 1479 aa34.81■■■■□ 3.16
CANX-204ENST00000502498 WDR62O43379 1518 aa34.72■■■■□ 3.15
CANX-204ENST00000502498 WIZO95785 1651 aa34.63■■■■□ 3.13
CANX-204ENST00000502498 CEP164Q9UPV0 1460 aa34.58■■■■□ 3.13
CANX-204ENST00000502498 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
CANX-204ENST00000502498 CFTRP13569 1480 aa34.36■■■■□ 3.09
CANX-204ENST00000502498 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
CANX-204ENST00000502498 URB2Q14146 1524 aaKnown RBP34.24■■■■□ 3.07
CANX-204ENST00000502498 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
CANX-204ENST00000502498 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
CANX-204ENST00000502498 RIMBP3CA6NJZ7 1639 aa33.93■■■■□ 3.02
CANX-204ENST00000502498 RIMBP3BA6NNM3 1639 aa33.93■■■■□ 3.02
CANX-204ENST00000502498 RIMBP3Q9UFD9 1639 aa33.93■■■■□ 3.02
CANX-204ENST00000502498 ZNF608Q9ULD9 1512 aaPredicted RBP33.92■■■■□ 3.02
CANX-204ENST00000502498 IFT140Q96RY7 1462 aa33.9■■■■□ 3.02
CANX-204ENST00000502498 PRDM2Q13029 1718 aa33.85■■■■□ 3.01
CANX-204ENST00000502498 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
CANX-204ENST00000502498 ARHGEF11O15085 1522 aa33.79■■■■□ 3
CANX-204ENST00000502498 TOPBP1Q92547 1522 aa33.77■■■■□ 3
CANX-204ENST00000502498 EIF4G3O43432 1585 aaKnown RBP33.66■■■□□ 2.98
CANX-204ENST00000502498 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
CANX-204ENST00000502498 CYB5RLQ6IPT4 315 aa33.62■■■□□ 2.97
CANX-204ENST00000502498 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
CANX-204ENST00000502498 AQRO60306 1485 aaKnown RBP eCLIP33.55■■■□□ 2.969e-10■■□□□ 13.2
CANX-204ENST00000502498 FBLN2P98095 1184 aa33.48■■■□□ 2.95
CANX-204ENST00000502498 TARBP1Q13395 1621 aaKnown RBP33.47■■■□□ 2.95
CANX-204ENST00000502498 CHD1O14646 1710 aa33.47■■■□□ 2.95
CANX-204ENST00000502498 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
CANX-204ENST00000502498 TRHP20396 242 aaPredicted RBP33.43■■■□□ 2.94
CANX-204ENST00000502498 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
CANX-204ENST00000502498 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
CANX-204ENST00000502498 TDRD9Q8NDG6 1382 aaKnown RBP33.28■■■□□ 2.92
CANX-204ENST00000502498 SOGA1O94964 1423 aa33.25■■■□□ 2.91
CANX-204ENST00000502498 SNAPC4Q5SXM2 1469 aa33.19■■■□□ 2.9
CANX-204ENST00000502498 FGD5Q6ZNL6 1462 aa33.12■■■□□ 2.89
CANX-204ENST00000502498 CHMP7Q8WUX9 453 aaPredicted RBP33.12■■■□□ 2.89
CANX-204ENST00000502498 CLASP1Q7Z460 1538 aa33.11■■■□□ 2.89
CANX-204ENST00000502498 WDR97A6NE52 1622 aa33.07■■■□□ 2.88
CANX-204ENST00000502498 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
CANX-204ENST00000502498 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
CANX-204ENST00000502498 GRIN2BQ13224 1484 aa33.01■■■□□ 2.88
CANX-204ENST00000502498 CUX1P39880 1505 aa33■■■□□ 2.87
CANX-204ENST00000502498 SYNJ2O15056 1496 aa32.96■■■□□ 2.87
CANX-204ENST00000502498 GAPVD1Q14C86 1478 aa32.83■■■□□ 2.85
CANX-204ENST00000502498 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
CANX-204ENST00000502498 PBRM1Q86U86 1689 aa32.78■■■□□ 2.84
CANX-204ENST00000502498 ABCA10Q8WWZ4 1543 aa32.7■■■□□ 2.83
CANX-204ENST00000502498 ABCA5Q8WWZ7 1642 aa32.67■■■□□ 2.82
CANX-204ENST00000502498 ERCC6L2Q5T890 1561 aa32.59■■■□□ 2.81
CANX-204ENST00000502498 GRIN2AQ12879 1464 aa32.58■■■□□ 2.81
CANX-204ENST00000502498 NUP160Q12769 1436 aa32.49■■■□□ 2.79
CANX-204ENST00000502498 WRNQ14191 1432 aaPredicted RBP eCLIP32.49■■■□□ 2.79
CANX-204ENST00000502498 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
CANX-204ENST00000502498 CEP170Q5SW79 1584 aa32.49■■■□□ 2.79
CANX-204ENST00000502498 FHAD1B1AJZ9 1412 aa32.4■■■□□ 2.78
CANX-204ENST00000502498 SUPT5HO00267 1087 aaKnown RBP32.37■■■□□ 2.77
CANX-204ENST00000502498 SHROOM2Q13796 1616 aa32.36■■■□□ 2.77
CANX-204ENST00000502498 TOP2BQ02880 1626 aa32.3■■■□□ 2.76
CANX-204ENST00000502498 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
CANX-204ENST00000502498 ERICH3Q5RHP9 1530 aa32.26■■■□□ 2.76
CANX-204ENST00000502498 PRG4Q92954 1404 aaPredicted RBP32.25■■■□□ 2.75
CANX-204ENST00000502498 JPH4Q96JJ6 628 aa32.18■■■□□ 2.74
CANX-204ENST00000502498 KIF13AQ9H1H9 1805 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms