RNA–Protein interactions for RNA: ENST00000502381.1

KLHL3-203, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-203ENST00000502381 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
KLHL3-203ENST00000502381 CCDC180Q9P1Z9 1646 aa29.76■■■□□ 2.35
KLHL3-203ENST00000502381 ABCC9O60706 1549 aa29.65■■■□□ 2.34
KLHL3-203ENST00000502381 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
KLHL3-203ENST00000502381 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
KLHL3-203ENST00000502381 NACADO15069 1562 aa28.15■■■□□ 2.1
KLHL3-203ENST00000502381 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
KLHL3-203ENST00000502381 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
KLHL3-203ENST00000502381 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
KLHL3-203ENST00000502381 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
KLHL3-203ENST00000502381 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
KLHL3-203ENST00000502381 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
KLHL3-203ENST00000502381 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
KLHL3-203ENST00000502381 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
KLHL3-203ENST00000502381 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
KLHL3-203ENST00000502381 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
KLHL3-203ENST00000502381 EIF4G1Q04637 1599 aaKnown RBP26.75■■□□□ 1.87
KLHL3-203ENST00000502381 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
KLHL3-203ENST00000502381 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
KLHL3-203ENST00000502381 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
KLHL3-203ENST00000502381 SMARCA4P51532 1647 aa25.94■■□□□ 1.74
KLHL3-203ENST00000502381 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
KLHL3-203ENST00000502381 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
KLHL3-203ENST00000502381 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
KLHL3-203ENST00000502381 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
KLHL3-203ENST00000502381 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
KLHL3-203ENST00000502381 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
KLHL3-203ENST00000502381 ERCC6Q03468 1493 aa25.59■■□□□ 1.69
KLHL3-203ENST00000502381 NESP48681 1621 aa25.52■■□□□ 1.68
KLHL3-203ENST00000502381 CUX2O14529 1486 aa25.45■■□□□ 1.66
KLHL3-203ENST00000502381 WIZO95785 1651 aa25.38■■□□□ 1.65
KLHL3-203ENST00000502381 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
KLHL3-203ENST00000502381 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
KLHL3-203ENST00000502381 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
KLHL3-203ENST00000502381 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
KLHL3-203ENST00000502381 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
KLHL3-203ENST00000502381 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
KLHL3-203ENST00000502381 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
KLHL3-203ENST00000502381 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
KLHL3-203ENST00000502381 CFTRP13569 1480 aa24.99■■□□□ 1.59
KLHL3-203ENST00000502381 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
KLHL3-203ENST00000502381 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
KLHL3-203ENST00000502381 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
KLHL3-203ENST00000502381 WDR62O43379 1518 aa24.9■■□□□ 1.58
KLHL3-203ENST00000502381 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
KLHL3-203ENST00000502381 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
KLHL3-203ENST00000502381 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
KLHL3-203ENST00000502381 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
KLHL3-203ENST00000502381 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
KLHL3-203ENST00000502381 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
KLHL3-203ENST00000502381 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
KLHL3-203ENST00000502381 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
KLHL3-203ENST00000502381 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.49
KLHL3-203ENST00000502381 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
KLHL3-203ENST00000502381 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
KLHL3-203ENST00000502381 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
KLHL3-203ENST00000502381 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
KLHL3-203ENST00000502381 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
KLHL3-203ENST00000502381 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.47
KLHL3-203ENST00000502381 SOGA1O94964 1423 aa24.18■■□□□ 1.46
KLHL3-203ENST00000502381 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
KLHL3-203ENST00000502381 CUX1P39880 1505 aa24.13■■□□□ 1.45
KLHL3-203ENST00000502381 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
KLHL3-203ENST00000502381 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
KLHL3-203ENST00000502381 FBLN2P98095 1184 aa24.05■■□□□ 1.44
KLHL3-203ENST00000502381 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
KLHL3-203ENST00000502381 CHD1O14646 1710 aa23.96■■□□□ 1.43
KLHL3-203ENST00000502381 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.43
KLHL3-203ENST00000502381 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.43
KLHL3-203ENST00000502381 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.43
KLHL3-203ENST00000502381 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
KLHL3-203ENST00000502381 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
KLHL3-203ENST00000502381 GRIN2BQ13224 1484 aa23.93■■□□□ 1.42
KLHL3-203ENST00000502381 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
KLHL3-203ENST00000502381 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
KLHL3-203ENST00000502381 ABCA10Q8WWZ4 1543 aa23.87■■□□□ 1.41
KLHL3-203ENST00000502381 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
KLHL3-203ENST00000502381 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
KLHL3-203ENST00000502381 CYB5RLQ6IPT4 315 aa23.82■■□□□ 1.4
KLHL3-203ENST00000502381 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
KLHL3-203ENST00000502381 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
KLHL3-203ENST00000502381 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
KLHL3-203ENST00000502381 SYNJ1O43426 1573 aa23.77■■□□□ 1.4
KLHL3-203ENST00000502381 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
KLHL3-203ENST00000502381 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
KLHL3-203ENST00000502381 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
KLHL3-203ENST00000502381 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
KLHL3-203ENST00000502381 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
KLHL3-203ENST00000502381 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
KLHL3-203ENST00000502381 ADAMTS12P58397 1594 aa23.58■■□□□ 1.37
KLHL3-203ENST00000502381 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
KLHL3-203ENST00000502381 NUP160Q12769 1436 aa23.51■■□□□ 1.35
KLHL3-203ENST00000502381 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
KLHL3-203ENST00000502381 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
KLHL3-203ENST00000502381 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
KLHL3-203ENST00000502381 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
KLHL3-203ENST00000502381 IGF1RP08069 1367 aa23.38■■□□□ 1.33
KLHL3-203ENST00000502381 SHROOM2Q13796 1616 aa23.34■■□□□ 1.33
KLHL3-203ENST00000502381 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
KLHL3-203ENST00000502381 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms