RNA–Protein interactions for RNA: ENST00000501294.1

LINC00900-202, long intergenic non-protein coding RNA 900, humanhuman

TSL 1 (best) BASIC

Gene LINC00900, Length 982 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00900-202ENST00000501294 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
LINC00900-202ENST00000501294 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
LINC00900-202ENST00000501294 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
LINC00900-202ENST00000501294 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
LINC00900-202ENST00000501294 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
LINC00900-202ENST00000501294 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
LINC00900-202ENST00000501294 ABCC9O60706 1549 aa20.37■□□□□ 0.85
LINC00900-202ENST00000501294 FOXD1Q16676 465 aa20.06■□□□□ 0.8
LINC00900-202ENST00000501294 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
LINC00900-202ENST00000501294 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
LINC00900-202ENST00000501294 NACADO15069 1562 aa19.49■□□□□ 0.71
LINC00900-202ENST00000501294 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
LINC00900-202ENST00000501294 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
LINC00900-202ENST00000501294 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
LINC00900-202ENST00000501294 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
LINC00900-202ENST00000501294 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
LINC00900-202ENST00000501294 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00900-202ENST00000501294 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
LINC00900-202ENST00000501294 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
LINC00900-202ENST00000501294 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
LINC00900-202ENST00000501294 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
LINC00900-202ENST00000501294 MSH5O43196 834 aa18.77■□□□□ 0.6
LINC00900-202ENST00000501294 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
LINC00900-202ENST00000501294 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
LINC00900-202ENST00000501294 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
LINC00900-202ENST00000501294 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
LINC00900-202ENST00000501294 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
LINC00900-202ENST00000501294 ADRA2BP18089 450 aa18.24■□□□□ 0.51
LINC00900-202ENST00000501294 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
LINC00900-202ENST00000501294 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
LINC00900-202ENST00000501294 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
LINC00900-202ENST00000501294 NCAPD3P42695 1498 aa17.98■□□□□ 0.47
LINC00900-202ENST00000501294 ATAD2BQ9ULI0 1458 aa17.96■□□□□ 0.47
LINC00900-202ENST00000501294 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
LINC00900-202ENST00000501294 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
LINC00900-202ENST00000501294 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
LINC00900-202ENST00000501294 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
LINC00900-202ENST00000501294 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
LINC00900-202ENST00000501294 WIZO95785 1651 aa17.64■□□□□ 0.41
LINC00900-202ENST00000501294 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
LINC00900-202ENST00000501294 ERCC6Q03468 1493 aa17.6■□□□□ 0.41
LINC00900-202ENST00000501294 NESP48681 1621 aa17.58■□□□□ 0.4
LINC00900-202ENST00000501294 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
LINC00900-202ENST00000501294 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
LINC00900-202ENST00000501294 CUX2O14529 1486 aa17.48■□□□□ 0.39
LINC00900-202ENST00000501294 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
LINC00900-202ENST00000501294 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
LINC00900-202ENST00000501294 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
LINC00900-202ENST00000501294 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
LINC00900-202ENST00000501294 CFTRP13569 1480 aa17.31■□□□□ 0.36
LINC00900-202ENST00000501294 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
LINC00900-202ENST00000501294 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
LINC00900-202ENST00000501294 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
LINC00900-202ENST00000501294 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
LINC00900-202ENST00000501294 WDR62O43379 1518 aa17.21■□□□□ 0.35
LINC00900-202ENST00000501294 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
LINC00900-202ENST00000501294 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
LINC00900-202ENST00000501294 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
LINC00900-202ENST00000501294 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
LINC00900-202ENST00000501294 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
LINC00900-202ENST00000501294 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
LINC00900-202ENST00000501294 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
LINC00900-202ENST00000501294 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
LINC00900-202ENST00000501294 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
LINC00900-202ENST00000501294 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
LINC00900-202ENST00000501294 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
LINC00900-202ENST00000501294 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
LINC00900-202ENST00000501294 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
LINC00900-202ENST00000501294 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.27
LINC00900-202ENST00000501294 CUX1P39880 1505 aa16.76■□□□□ 0.27
LINC00900-202ENST00000501294 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
LINC00900-202ENST00000501294 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
LINC00900-202ENST00000501294 SOGA1O94964 1423 aa16.71■□□□□ 0.27
LINC00900-202ENST00000501294 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00900-202ENST00000501294 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
LINC00900-202ENST00000501294 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
LINC00900-202ENST00000501294 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
LINC00900-202ENST00000501294 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
LINC00900-202ENST00000501294 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
LINC00900-202ENST00000501294 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.24
LINC00900-202ENST00000501294 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
LINC00900-202ENST00000501294 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
LINC00900-202ENST00000501294 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
LINC00900-202ENST00000501294 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
LINC00900-202ENST00000501294 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
LINC00900-202ENST00000501294 CHD1O14646 1710 aa16.55■□□□□ 0.24
LINC00900-202ENST00000501294 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
LINC00900-202ENST00000501294 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
LINC00900-202ENST00000501294 FBLN2P98095 1184 aa16.52■□□□□ 0.24
LINC00900-202ENST00000501294 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
LINC00900-202ENST00000501294 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
LINC00900-202ENST00000501294 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
LINC00900-202ENST00000501294 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
LINC00900-202ENST00000501294 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
LINC00900-202ENST00000501294 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
LINC00900-202ENST00000501294 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
LINC00900-202ENST00000501294 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
LINC00900-202ENST00000501294 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
LINC00900-202ENST00000501294 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
LINC00900-202ENST00000501294 ADAMTS12P58397 1594 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms