RNA–Protein interactions for RNA: ENST00000500571.2

NIPAL1-202, Transcript of NIPA like domain containing 1, humanhuman

TSL 5

Gene NIPAL1, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-202ENST00000500571 NISCHQ9Y2I1 1504 aa36.88■■■■□ 3.49
NIPAL1-202ENST00000500571 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
NIPAL1-202ENST00000500571 ABCC9O60706 1549 aa32.2■■■□□ 2.74
NIPAL1-202ENST00000500571 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
NIPAL1-202ENST00000500571 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
NIPAL1-202ENST00000500571 NACADO15069 1562 aa30.9■■■□□ 2.54
NIPAL1-202ENST00000500571 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
NIPAL1-202ENST00000500571 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
NIPAL1-202ENST00000500571 DCAF1Q9Y4B6 1507 aa30.49■■■□□ 2.47
NIPAL1-202ENST00000500571 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
NIPAL1-202ENST00000500571 PABPN1Q86U42 306 aaKnown RBP eCLIP30.08■■■□□ 2.41
NIPAL1-202ENST00000500571 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
NIPAL1-202ENST00000500571 SCRIBQ14160 1630 aa29.97■■■□□ 2.39
NIPAL1-202ENST00000500571 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
NIPAL1-202ENST00000500571 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
NIPAL1-202ENST00000500571 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
NIPAL1-202ENST00000500571 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
NIPAL1-202ENST00000500571 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
NIPAL1-202ENST00000500571 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
NIPAL1-202ENST00000500571 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
NIPAL1-202ENST00000500571 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
NIPAL1-202ENST00000500571 ATAD2BQ9ULI0 1458 aa28.48■■■□□ 2.15
NIPAL1-202ENST00000500571 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
NIPAL1-202ENST00000500571 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
NIPAL1-202ENST00000500571 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
NIPAL1-202ENST00000500571 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
NIPAL1-202ENST00000500571 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
NIPAL1-202ENST00000500571 WIZO95785 1651 aa28.16■■■□□ 2.1
NIPAL1-202ENST00000500571 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
NIPAL1-202ENST00000500571 NESP48681 1621 aa27.83■■■□□ 2.05
NIPAL1-202ENST00000500571 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
NIPAL1-202ENST00000500571 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
NIPAL1-202ENST00000500571 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
NIPAL1-202ENST00000500571 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
NIPAL1-202ENST00000500571 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
NIPAL1-202ENST00000500571 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
NIPAL1-202ENST00000500571 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
NIPAL1-202ENST00000500571 CUX2O14529 1486 aa27.48■■□□□ 1.99
NIPAL1-202ENST00000500571 CFTRP13569 1480 aa27.46■■□□□ 1.99
NIPAL1-202ENST00000500571 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
NIPAL1-202ENST00000500571 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
NIPAL1-202ENST00000500571 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
NIPAL1-202ENST00000500571 FANCD2Q9BXW9 1451 aa27.35■■□□□ 1.97
NIPAL1-202ENST00000500571 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
NIPAL1-202ENST00000500571 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
NIPAL1-202ENST00000500571 WDR62O43379 1518 aa27.2■■□□□ 1.94
NIPAL1-202ENST00000500571 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
NIPAL1-202ENST00000500571 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
NIPAL1-202ENST00000500571 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
NIPAL1-202ENST00000500571 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
NIPAL1-202ENST00000500571 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
NIPAL1-202ENST00000500571 DNAJC5Q9H3Z4 198 aa26.72■■□□□ 1.87
NIPAL1-202ENST00000500571 CUX1P39880 1505 aa26.67■■□□□ 1.86
NIPAL1-202ENST00000500571 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
NIPAL1-202ENST00000500571 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
NIPAL1-202ENST00000500571 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
NIPAL1-202ENST00000500571 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
NIPAL1-202ENST00000500571 SOGA1O94964 1423 aa26.58■■□□□ 1.85
NIPAL1-202ENST00000500571 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
NIPAL1-202ENST00000500571 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
NIPAL1-202ENST00000500571 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
NIPAL1-202ENST00000500571 AQRO60306 1485 aaKnown RBP eCLIP26.48■■□□□ 1.83
NIPAL1-202ENST00000500571 BIVM-ERCC5R4GMW8 1640 aa26.45■■□□□ 1.82
NIPAL1-202ENST00000500571 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
NIPAL1-202ENST00000500571 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
NIPAL1-202ENST00000500571 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
NIPAL1-202ENST00000500571 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
NIPAL1-202ENST00000500571 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
NIPAL1-202ENST00000500571 ABCA10Q8WWZ4 1543 aa26.33■■□□□ 1.81
NIPAL1-202ENST00000500571 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
NIPAL1-202ENST00000500571 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
NIPAL1-202ENST00000500571 CHD1O14646 1710 aa26.27■■□□□ 1.8
NIPAL1-202ENST00000500571 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
NIPAL1-202ENST00000500571 FBLN2P98095 1184 aa26.25■■□□□ 1.79
NIPAL1-202ENST00000500571 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
NIPAL1-202ENST00000500571 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
NIPAL1-202ENST00000500571 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
NIPAL1-202ENST00000500571 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
NIPAL1-202ENST00000500571 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
NIPAL1-202ENST00000500571 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
NIPAL1-202ENST00000500571 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
NIPAL1-202ENST00000500571 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
NIPAL1-202ENST00000500571 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
NIPAL1-202ENST00000500571 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
NIPAL1-202ENST00000500571 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
NIPAL1-202ENST00000500571 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
NIPAL1-202ENST00000500571 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
NIPAL1-202ENST00000500571 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
NIPAL1-202ENST00000500571 CLASP1Q7Z460 1538 aa25.9■■□□□ 1.74
NIPAL1-202ENST00000500571 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
NIPAL1-202ENST00000500571 IGF1RP08069 1367 aa25.82■■□□□ 1.72
NIPAL1-202ENST00000500571 CUL7Q14999 1698 aa25.81■■□□□ 1.72
NIPAL1-202ENST00000500571 CEP170Q5SW79 1584 aa25.79■■□□□ 1.72
NIPAL1-202ENST00000500571 NUP160Q12769 1436 aa25.79■■□□□ 1.72
NIPAL1-202ENST00000500571 CYB5RLQ6IPT4 315 aa25.71■■□□□ 1.71
NIPAL1-202ENST00000500571 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
NIPAL1-202ENST00000500571 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
NIPAL1-202ENST00000500571 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
NIPAL1-202ENST00000500571 SHROOM2Q13796 1616 aa25.62■■□□□ 1.69
NIPAL1-202ENST00000500571 JPH4Q96JJ6 628 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms