RNA–Protein interactions for RNA: ENST00000498819.1

SECISBP2-208, Transcript of SECIS binding protein 2, humanhuman

TSL 5

Gene SECISBP2, Length 854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-208ENST00000498819 NISCHQ9Y2I1 1504 aa25.13■■□□□ 1.61
SECISBP2-208ENST00000498819 ABCC9O60706 1549 aa23.38■■□□□ 1.33
SECISBP2-208ENST00000498819 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
SECISBP2-208ENST00000498819 DNAJC5BQ9UF47 199 aa22.49■■□□□ 1.19
SECISBP2-208ENST00000498819 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
SECISBP2-208ENST00000498819 NACADO15069 1562 aa21.72■■□□□ 1.07
SECISBP2-208ENST00000498819 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
SECISBP2-208ENST00000498819 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
SECISBP2-208ENST00000498819 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
SECISBP2-208ENST00000498819 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
SECISBP2-208ENST00000498819 MYO15BQ96JP2 1530 aa21.26■□□□□ 0.99
SECISBP2-208ENST00000498819 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
SECISBP2-208ENST00000498819 DNAJC5Q9H3Z4 198 aa21.12■□□□□ 0.97
SECISBP2-208ENST00000498819 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
SECISBP2-208ENST00000498819 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
SECISBP2-208ENST00000498819 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
SECISBP2-208ENST00000498819 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
SECISBP2-208ENST00000498819 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
SECISBP2-208ENST00000498819 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
SECISBP2-208ENST00000498819 CUX2O14529 1486 aa20.43■□□□□ 0.86
SECISBP2-208ENST00000498819 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
SECISBP2-208ENST00000498819 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
SECISBP2-208ENST00000498819 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
SECISBP2-208ENST00000498819 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
SECISBP2-208ENST00000498819 NESP48681 1621 aa19.9■□□□□ 0.78
SECISBP2-208ENST00000498819 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
SECISBP2-208ENST00000498819 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
SECISBP2-208ENST00000498819 THOC2Q8NI27 1593 aaKnown RBP19.81■□□□□ 0.76
SECISBP2-208ENST00000498819 SMARCA4P51532 1647 aa19.7■□□□□ 0.74
SECISBP2-208ENST00000498819 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
SECISBP2-208ENST00000498819 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
SECISBP2-208ENST00000498819 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
SECISBP2-208ENST00000498819 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
SECISBP2-208ENST00000498819 PEG3Q9GZU2 1588 aa19.56■□□□□ 0.72
SECISBP2-208ENST00000498819 BAZ1AQ9NRL2 1556 aaPredicted RBP19.55■□□□□ 0.72
SECISBP2-208ENST00000498819 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
SECISBP2-208ENST00000498819 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
SECISBP2-208ENST00000498819 WDR62O43379 1518 aa19.44■□□□□ 0.7
SECISBP2-208ENST00000498819 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
SECISBP2-208ENST00000498819 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
SECISBP2-208ENST00000498819 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
SECISBP2-208ENST00000498819 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
SECISBP2-208ENST00000498819 RIMBP3CA6NJZ7 1639 aa19.15■□□□□ 0.66
SECISBP2-208ENST00000498819 RIMBP3BA6NNM3 1639 aa19.15■□□□□ 0.66
SECISBP2-208ENST00000498819 RIMBP3Q9UFD9 1639 aa19.15■□□□□ 0.66
SECISBP2-208ENST00000498819 CFTRP13569 1480 aa19.09■□□□□ 0.65
SECISBP2-208ENST00000498819 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
SECISBP2-208ENST00000498819 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
SECISBP2-208ENST00000498819 WIZO95785 1651 aa19.05■□□□□ 0.64
SECISBP2-208ENST00000498819 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
SECISBP2-208ENST00000498819 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
SECISBP2-208ENST00000498819 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
SECISBP2-208ENST00000498819 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
SECISBP2-208ENST00000498819 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
SECISBP2-208ENST00000498819 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
SECISBP2-208ENST00000498819 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
SECISBP2-208ENST00000498819 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
SECISBP2-208ENST00000498819 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
SECISBP2-208ENST00000498819 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
SECISBP2-208ENST00000498819 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SECISBP2-208ENST00000498819 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
SECISBP2-208ENST00000498819 FBLN2P98095 1184 aa18.7■□□□□ 0.58
SECISBP2-208ENST00000498819 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.58
SECISBP2-208ENST00000498819 CHD1O14646 1710 aa18.69■□□□□ 0.58
SECISBP2-208ENST00000498819 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
SECISBP2-208ENST00000498819 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
SECISBP2-208ENST00000498819 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
SECISBP2-208ENST00000498819 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
SECISBP2-208ENST00000498819 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
SECISBP2-208ENST00000498819 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
SECISBP2-208ENST00000498819 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
SECISBP2-208ENST00000498819 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
SECISBP2-208ENST00000498819 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
SECISBP2-208ENST00000498819 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
SECISBP2-208ENST00000498819 SOGA1O94964 1423 aa18.45■□□□□ 0.54
SECISBP2-208ENST00000498819 WDR97A6NE52 1622 aa18.42■□□□□ 0.54
SECISBP2-208ENST00000498819 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
SECISBP2-208ENST00000498819 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.54
SECISBP2-208ENST00000498819 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
SECISBP2-208ENST00000498819 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
SECISBP2-208ENST00000498819 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
SECISBP2-208ENST00000498819 CUX1P39880 1505 aa18.2■□□□□ 0.5
SECISBP2-208ENST00000498819 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
SECISBP2-208ENST00000498819 PBRM1Q86U86 1689 aa18.16■□□□□ 0.5
SECISBP2-208ENST00000498819 GRIN2AQ12879 1464 aa18.12■□□□□ 0.49
SECISBP2-208ENST00000498819 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
SECISBP2-208ENST00000498819 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
SECISBP2-208ENST00000498819 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
SECISBP2-208ENST00000498819 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
SECISBP2-208ENST00000498819 NUP160Q12769 1436 aa18.09■□□□□ 0.49
SECISBP2-208ENST00000498819 KIF13AQ9H1H9 1805 aa18.09■□□□□ 0.49
SECISBP2-208ENST00000498819 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
SECISBP2-208ENST00000498819 KDM4FA0A1W2PPD8 638 aa18.04■□□□□ 0.48
SECISBP2-208ENST00000498819 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.48
SECISBP2-208ENST00000498819 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
SECISBP2-208ENST00000498819 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
SECISBP2-208ENST00000498819 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
SECISBP2-208ENST00000498819 PRG4Q92954 1404 aaPredicted RBP17.96■□□□□ 0.47
SECISBP2-208ENST00000498819 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
SECISBP2-208ENST00000498819 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms