RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
FXR1-222ENST00000498658 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
FXR1-222ENST00000498658 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
FXR1-222ENST00000498658 ABCC9O60706 1549 aa22.31■■□□□ 1.16
FXR1-222ENST00000498658 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
FXR1-222ENST00000498658 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
FXR1-222ENST00000498658 NACADO15069 1562 aa21.46■■□□□ 1.03
FXR1-222ENST00000498658 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
FXR1-222ENST00000498658 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
FXR1-222ENST00000498658 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
FXR1-222ENST00000498658 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
FXR1-222ENST00000498658 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
FXR1-222ENST00000498658 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
FXR1-222ENST00000498658 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
FXR1-222ENST00000498658 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
FXR1-222ENST00000498658 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
FXR1-222ENST00000498658 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
FXR1-222ENST00000498658 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
FXR1-222ENST00000498658 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
FXR1-222ENST00000498658 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
FXR1-222ENST00000498658 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
FXR1-222ENST00000498658 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
FXR1-222ENST00000498658 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
FXR1-222ENST00000498658 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
FXR1-222ENST00000498658 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
FXR1-222ENST00000498658 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
FXR1-222ENST00000498658 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
FXR1-222ENST00000498658 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
FXR1-222ENST00000498658 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
FXR1-222ENST00000498658 WIZO95785 1651 aa19.43■□□□□ 0.7
FXR1-222ENST00000498658 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
FXR1-222ENST00000498658 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
FXR1-222ENST00000498658 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
FXR1-222ENST00000498658 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
FXR1-222ENST00000498658 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
FXR1-222ENST00000498658 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
FXR1-222ENST00000498658 NESP48681 1621 aa19.25■□□□□ 0.67
FXR1-222ENST00000498658 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
FXR1-222ENST00000498658 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
FXR1-222ENST00000498658 CUX2O14529 1486 aa19.14■□□□□ 0.65
FXR1-222ENST00000498658 CFTRP13569 1480 aa19.07■□□□□ 0.64
FXR1-222ENST00000498658 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
FXR1-222ENST00000498658 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
FXR1-222ENST00000498658 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
FXR1-222ENST00000498658 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
FXR1-222ENST00000498658 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
FXR1-222ENST00000498658 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
FXR1-222ENST00000498658 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
FXR1-222ENST00000498658 WDR62O43379 1518 aa18.89■□□□□ 0.61
FXR1-222ENST00000498658 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
FXR1-222ENST00000498658 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
FXR1-222ENST00000498658 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
FXR1-222ENST00000498658 TOPBP1Q92547 1522 aa18.64■□□□□ 0.58
FXR1-222ENST00000498658 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
FXR1-222ENST00000498658 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
FXR1-222ENST00000498658 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
FXR1-222ENST00000498658 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
FXR1-222ENST00000498658 CUX1P39880 1505 aa18.44■□□□□ 0.54
FXR1-222ENST00000498658 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
FXR1-222ENST00000498658 SOGA1O94964 1423 aa18.43■□□□□ 0.54
FXR1-222ENST00000498658 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
FXR1-222ENST00000498658 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
FXR1-222ENST00000498658 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
FXR1-222ENST00000498658 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
FXR1-222ENST00000498658 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
FXR1-222ENST00000498658 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
FXR1-222ENST00000498658 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
FXR1-222ENST00000498658 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.532e-8■□□□□ 8.5
FXR1-222ENST00000498658 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
FXR1-222ENST00000498658 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
FXR1-222ENST00000498658 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
FXR1-222ENST00000498658 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
FXR1-222ENST00000498658 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
FXR1-222ENST00000498658 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
FXR1-222ENST00000498658 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
FXR1-222ENST00000498658 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
FXR1-222ENST00000498658 FBLN2P98095 1184 aa18.18■□□□□ 0.5
FXR1-222ENST00000498658 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
FXR1-222ENST00000498658 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
FXR1-222ENST00000498658 CHD1O14646 1710 aa18.15■□□□□ 0.5
FXR1-222ENST00000498658 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
FXR1-222ENST00000498658 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
FXR1-222ENST00000498658 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
FXR1-222ENST00000498658 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
FXR1-222ENST00000498658 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
FXR1-222ENST00000498658 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
FXR1-222ENST00000498658 KIF27Q86VH2 1401 aa18■□□□□ 0.47
FXR1-222ENST00000498658 ADAMTS12P58397 1594 aa18■□□□□ 0.47
FXR1-222ENST00000498658 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
FXR1-222ENST00000498658 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
FXR1-222ENST00000498658 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
FXR1-222ENST00000498658 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
FXR1-222ENST00000498658 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
FXR1-222ENST00000498658 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
FXR1-222ENST00000498658 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
FXR1-222ENST00000498658 NUP160Q12769 1436 aa17.9■□□□□ 0.46
FXR1-222ENST00000498658 IGF1RP08069 1367 aa17.9■□□□□ 0.46
FXR1-222ENST00000498658 CUL7Q14999 1698 aa17.88■□□□□ 0.45
FXR1-222ENST00000498658 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
FXR1-222ENST00000498658 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms