RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
TMEM39B-209ENST00000498613 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
TMEM39B-209ENST00000498613 ABCC9O60706 1549 aa26.31■■□□□ 1.8
TMEM39B-209ENST00000498613 DCAF8L2P0C7V8 631 aa25.3■■□□□ 1.64
TMEM39B-209ENST00000498613 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
TMEM39B-209ENST00000498613 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
TMEM39B-209ENST00000498613 NACADO15069 1562 aa25■■□□□ 1.59
TMEM39B-209ENST00000498613 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
TMEM39B-209ENST00000498613 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
TMEM39B-209ENST00000498613 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
TMEM39B-209ENST00000498613 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
TMEM39B-209ENST00000498613 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
TMEM39B-209ENST00000498613 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
TMEM39B-209ENST00000498613 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
TMEM39B-209ENST00000498613 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
TMEM39B-209ENST00000498613 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
TMEM39B-209ENST00000498613 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
TMEM39B-209ENST00000498613 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
TMEM39B-209ENST00000498613 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
TMEM39B-209ENST00000498613 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
TMEM39B-209ENST00000498613 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
TMEM39B-209ENST00000498613 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
TMEM39B-209ENST00000498613 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
TMEM39B-209ENST00000498613 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
TMEM39B-209ENST00000498613 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
TMEM39B-209ENST00000498613 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
TMEM39B-209ENST00000498613 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
TMEM39B-209ENST00000498613 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
TMEM39B-209ENST00000498613 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
TMEM39B-209ENST00000498613 CUX2O14529 1486 aa22.85■■□□□ 1.25
TMEM39B-209ENST00000498613 WIZO95785 1651 aa22.85■■□□□ 1.25
TMEM39B-209ENST00000498613 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
TMEM39B-209ENST00000498613 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
TMEM39B-209ENST00000498613 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
TMEM39B-209ENST00000498613 NESP48681 1621 aa22.51■■□□□ 1.19
TMEM39B-209ENST00000498613 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
TMEM39B-209ENST00000498613 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
TMEM39B-209ENST00000498613 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
TMEM39B-209ENST00000498613 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
TMEM39B-209ENST00000498613 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
TMEM39B-209ENST00000498613 CFTRP13569 1480 aa22.3■■□□□ 1.16
TMEM39B-209ENST00000498613 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
TMEM39B-209ENST00000498613 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
TMEM39B-209ENST00000498613 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
TMEM39B-209ENST00000498613 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
TMEM39B-209ENST00000498613 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
TMEM39B-209ENST00000498613 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
TMEM39B-209ENST00000498613 WDR62O43379 1518 aa22■■□□□ 1.11
TMEM39B-209ENST00000498613 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
TMEM39B-209ENST00000498613 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
TMEM39B-209ENST00000498613 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
TMEM39B-209ENST00000498613 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
TMEM39B-209ENST00000498613 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
TMEM39B-209ENST00000498613 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
TMEM39B-209ENST00000498613 CUX1P39880 1505 aa21.65■■□□□ 1.06
TMEM39B-209ENST00000498613 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
TMEM39B-209ENST00000498613 SOGA1O94964 1423 aa21.64■■□□□ 1.06
TMEM39B-209ENST00000498613 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
TMEM39B-209ENST00000498613 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
TMEM39B-209ENST00000498613 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
TMEM39B-209ENST00000498613 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
TMEM39B-209ENST00000498613 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
TMEM39B-209ENST00000498613 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
TMEM39B-209ENST00000498613 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
TMEM39B-209ENST00000498613 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
TMEM39B-209ENST00000498613 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
TMEM39B-209ENST00000498613 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
TMEM39B-209ENST00000498613 TARBP1Q13395 1621 aaKnown RBP21.45■■□□□ 1.02
TMEM39B-209ENST00000498613 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
TMEM39B-209ENST00000498613 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.025e-6■■■□□ 15.6
TMEM39B-209ENST00000498613 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
TMEM39B-209ENST00000498613 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
TMEM39B-209ENST00000498613 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
TMEM39B-209ENST00000498613 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
TMEM39B-209ENST00000498613 GRIN2BQ13224 1484 aa21.32■■□□□ 1
TMEM39B-209ENST00000498613 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
TMEM39B-209ENST00000498613 FBLN2P98095 1184 aa21.32■■□□□ 1
TMEM39B-209ENST00000498613 KIF27Q86VH2 1401 aa21.31■■□□□ 1
TMEM39B-209ENST00000498613 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
TMEM39B-209ENST00000498613 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
TMEM39B-209ENST00000498613 CHD1O14646 1710 aa21.26■□□□□ 0.99
TMEM39B-209ENST00000498613 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
TMEM39B-209ENST00000498613 ABCA5Q8WWZ7 1642 aa21.2■□□□□ 0.98
TMEM39B-209ENST00000498613 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
TMEM39B-209ENST00000498613 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
TMEM39B-209ENST00000498613 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
TMEM39B-209ENST00000498613 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
TMEM39B-209ENST00000498613 IGF1RP08069 1367 aa21.15■□□□□ 0.98
TMEM39B-209ENST00000498613 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
TMEM39B-209ENST00000498613 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
TMEM39B-209ENST00000498613 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
TMEM39B-209ENST00000498613 EEA1Q15075 1411 aa21.07■□□□□ 0.96
TMEM39B-209ENST00000498613 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
TMEM39B-209ENST00000498613 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
TMEM39B-209ENST00000498613 TRHP20396 242 aaPredicted RBP21.05■□□□□ 0.96
TMEM39B-209ENST00000498613 FAM9AQ8IZU1 332 aaPredicted RBP21.04■□□□□ 0.96
TMEM39B-209ENST00000498613 RUSC2Q8N2Y8 1516 aa21.02■□□□□ 0.96
TMEM39B-209ENST00000498613 CUL7Q14999 1698 aa21■□□□□ 0.95
TMEM39B-209ENST00000498613 ADAMTS12P58397 1594 aa21■□□□□ 0.95
TMEM39B-209ENST00000498613 GRIN2AQ12879 1464 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms