RNA–Protein interactions for RNA: ENST00000498575.1

PRRT1-212, Transcript of proline rich transmembrane protein 1, humanhuman

TSL 1 (best)

Gene PRRT1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT1-212ENST00000498575 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
PRRT1-212ENST00000498575 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
PRRT1-212ENST00000498575 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
PRRT1-212ENST00000498575 ABCC9O60706 1549 aa26.17■■□□□ 1.78
PRRT1-212ENST00000498575 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
PRRT1-212ENST00000498575 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
PRRT1-212ENST00000498575 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
PRRT1-212ENST00000498575 NACADO15069 1562 aa24.39■■□□□ 1.5
PRRT1-212ENST00000498575 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
PRRT1-212ENST00000498575 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
PRRT1-212ENST00000498575 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
PRRT1-212ENST00000498575 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
PRRT1-212ENST00000498575 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
PRRT1-212ENST00000498575 CECR2Q9BXF3 1484 aa23.61■■□□□ 1.37
PRRT1-212ENST00000498575 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
PRRT1-212ENST00000498575 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
PRRT1-212ENST00000498575 ZCCHC6Q5VYS8 1495 aaKnown RBP23.47■■□□□ 1.35
PRRT1-212ENST00000498575 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
PRRT1-212ENST00000498575 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
PRRT1-212ENST00000498575 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
PRRT1-212ENST00000498575 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
PRRT1-212ENST00000498575 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
PRRT1-212ENST00000498575 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
PRRT1-212ENST00000498575 CUX2O14529 1486 aa22.68■■□□□ 1.22
PRRT1-212ENST00000498575 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
PRRT1-212ENST00000498575 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
PRRT1-212ENST00000498575 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
PRRT1-212ENST00000498575 NESP48681 1621 aa22.36■■□□□ 1.17
PRRT1-212ENST00000498575 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
PRRT1-212ENST00000498575 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
PRRT1-212ENST00000498575 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
PRRT1-212ENST00000498575 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
PRRT1-212ENST00000498575 THOC2Q8NI27 1593 aaKnown RBP22.13■■□□□ 1.13
PRRT1-212ENST00000498575 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
PRRT1-212ENST00000498575 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
PRRT1-212ENST00000498575 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
PRRT1-212ENST00000498575 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
PRRT1-212ENST00000498575 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
PRRT1-212ENST00000498575 KIF21AQ7Z4S6 1674 aa21.96■■□□□ 1.11
PRRT1-212ENST00000498575 MROH2BQ7Z745 1585 aa21.94■■□□□ 1.1
PRRT1-212ENST00000498575 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
PRRT1-212ENST00000498575 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
PRRT1-212ENST00000498575 FOXD1Q16676 465 aa21.77■■□□□ 1.08
PRRT1-212ENST00000498575 WDR62O43379 1518 aa21.76■■□□□ 1.07
PRRT1-212ENST00000498575 OSCARQ8IYS5 282 aa21.68■■□□□ 1.06
PRRT1-212ENST00000498575 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
PRRT1-212ENST00000498575 WIZO95785 1651 aa21.62■■□□□ 1.05
PRRT1-212ENST00000498575 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
PRRT1-212ENST00000498575 CFTRP13569 1480 aa21.53■■□□□ 1.04
PRRT1-212ENST00000498575 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
PRRT1-212ENST00000498575 PLPPR3Q6T4P5 718 aa21.38■■□□□ 1.01
PRRT1-212ENST00000498575 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
PRRT1-212ENST00000498575 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1.01
PRRT1-212ENST00000498575 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1.01
PRRT1-212ENST00000498575 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1.01
PRRT1-212ENST00000498575 TOP2AP11388 1531 aaKnown RBP21.3■■□□□ 1
PRRT1-212ENST00000498575 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
PRRT1-212ENST00000498575 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
PRRT1-212ENST00000498575 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
PRRT1-212ENST00000498575 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
PRRT1-212ENST00000498575 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
PRRT1-212ENST00000498575 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
PRRT1-212ENST00000498575 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
PRRT1-212ENST00000498575 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
PRRT1-212ENST00000498575 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.962e-19■■■■■ 71.9
PRRT1-212ENST00000498575 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
PRRT1-212ENST00000498575 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
PRRT1-212ENST00000498575 FBLN2P98095 1184 aa21.04■□□□□ 0.96
PRRT1-212ENST00000498575 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
PRRT1-212ENST00000498575 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
PRRT1-212ENST00000498575 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
PRRT1-212ENST00000498575 CHD1O14646 1710 aa20.95■□□□□ 0.94
PRRT1-212ENST00000498575 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
PRRT1-212ENST00000498575 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
PRRT1-212ENST00000498575 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
PRRT1-212ENST00000498575 SOGA1O94964 1423 aa20.85■□□□□ 0.93
PRRT1-212ENST00000498575 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
PRRT1-212ENST00000498575 SNAPC4Q5SXM2 1469 aa20.78■□□□□ 0.92
PRRT1-212ENST00000498575 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
PRRT1-212ENST00000498575 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
PRRT1-212ENST00000498575 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
PRRT1-212ENST00000498575 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
PRRT1-212ENST00000498575 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
PRRT1-212ENST00000498575 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
PRRT1-212ENST00000498575 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
PRRT1-212ENST00000498575 ADRA2BP18089 450 aa20.66■□□□□ 0.9
PRRT1-212ENST00000498575 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
PRRT1-212ENST00000498575 CUX1P39880 1505 aa20.63■□□□□ 0.89
PRRT1-212ENST00000498575 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
PRRT1-212ENST00000498575 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
PRRT1-212ENST00000498575 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
PRRT1-212ENST00000498575 PIAS4Q8N2W9 510 aaPredicted RBP20.45■□□□□ 0.86
PRRT1-212ENST00000498575 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
PRRT1-212ENST00000498575 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
PRRT1-212ENST00000498575 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
PRRT1-212ENST00000498575 NUP160Q12769 1436 aa20.36■□□□□ 0.85
PRRT1-212ENST00000498575 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
PRRT1-212ENST00000498575 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
PRRT1-212ENST00000498575 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
PRRT1-212ENST00000498575 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms