RNA–Protein interactions for RNA: ENST00000498553.5

PBXIP1-206, Transcript of PBX homeobox interacting protein 1, humanhuman

TSL 5

Gene PBXIP1, Length 777 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-206ENST00000498553 NISCHQ9Y2I1 1504 aa39.61■■■■□ 3.93
PBXIP1-206ENST00000498553 CCDC180Q9P1Z9 1646 aa35.22■■■■□ 3.23
PBXIP1-206ENST00000498553 ABCC9O60706 1549 aa34.52■■■■□ 3.12
PBXIP1-206ENST00000498553 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
PBXIP1-206ENST00000498553 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
PBXIP1-206ENST00000498553 NACADO15069 1562 aa33.13■■■□□ 2.89
PBXIP1-206ENST00000498553 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
PBXIP1-206ENST00000498553 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
PBXIP1-206ENST00000498553 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
PBXIP1-206ENST00000498553 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
PBXIP1-206ENST00000498553 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
PBXIP1-206ENST00000498553 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
PBXIP1-206ENST00000498553 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
PBXIP1-206ENST00000498553 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
PBXIP1-206ENST00000498553 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
PBXIP1-206ENST00000498553 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
PBXIP1-206ENST00000498553 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.59
PBXIP1-206ENST00000498553 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
PBXIP1-206ENST00000498553 SMARCA4P51532 1647 aa30.74■■■□□ 2.51
PBXIP1-206ENST00000498553 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
PBXIP1-206ENST00000498553 ATAD2BQ9ULI0 1458 aa30.59■■■□□ 2.49
PBXIP1-206ENST00000498553 NCAPD3P42695 1498 aa30.58■■■□□ 2.49
PBXIP1-206ENST00000498553 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
PBXIP1-206ENST00000498553 MROH2BQ7Z745 1585 aa30.53■■■□□ 2.48
PBXIP1-206ENST00000498553 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
PBXIP1-206ENST00000498553 HMGXB3Q12766 1538 aa30.42■■■□□ 2.46
PBXIP1-206ENST00000498553 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
PBXIP1-206ENST00000498553 WIZO95785 1651 aa30.18■■■□□ 2.42
PBXIP1-206ENST00000498553 RSF1Q96T23 1441 aaPredicted RBP30.18■■■□□ 2.42
PBXIP1-206ENST00000498553 TOP2AP11388 1531 aaKnown RBP29.89■■■□□ 2.38
PBXIP1-206ENST00000498553 NESP48681 1621 aa29.85■■■□□ 2.37
PBXIP1-206ENST00000498553 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
PBXIP1-206ENST00000498553 ERCC6Q03468 1493 aa29.77■■■□□ 2.36
PBXIP1-206ENST00000498553 CADPSQ9ULU8 1353 aa29.7■■■□□ 2.35
PBXIP1-206ENST00000498553 PDS5BQ9NTI5 1447 aa29.6■■■□□ 2.33
PBXIP1-206ENST00000498553 CCDC88BA6NC98 1476 aa29.53■■■□□ 2.32
PBXIP1-206ENST00000498553 CFTRP13569 1480 aa29.5■■■□□ 2.31
PBXIP1-206ENST00000498553 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
PBXIP1-206ENST00000498553 CUX2O14529 1486 aa29.46■■■□□ 2.31
PBXIP1-206ENST00000498553 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
PBXIP1-206ENST00000498553 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.3
PBXIP1-206ENST00000498553 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
PBXIP1-206ENST00000498553 CEP164Q9UPV0 1460 aa29.33■■■□□ 2.29
PBXIP1-206ENST00000498553 MRC2Q9UBG0 1479 aa29.29■■■□□ 2.28
PBXIP1-206ENST00000498553 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
PBXIP1-206ENST00000498553 WDR62O43379 1518 aa29.18■■■□□ 2.26
PBXIP1-206ENST00000498553 URB2Q14146 1524 aaKnown RBP29.05■■■□□ 2.24
PBXIP1-206ENST00000498553 TOPBP1Q92547 1522 aa28.88■■■□□ 2.21
PBXIP1-206ENST00000498553 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
PBXIP1-206ENST00000498553 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
PBXIP1-206ENST00000498553 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
PBXIP1-206ENST00000498553 CUX1P39880 1505 aa28.64■■■□□ 2.18
PBXIP1-206ENST00000498553 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
PBXIP1-206ENST00000498553 DNAJC5Q9H3Z4 198 aa28.58■■■□□ 2.17
PBXIP1-206ENST00000498553 ZNF608Q9ULD9 1512 aaPredicted RBP28.58■■■□□ 2.17
PBXIP1-206ENST00000498553 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
PBXIP1-206ENST00000498553 TARBP1Q13395 1621 aaKnown RBP28.54■■■□□ 2.16
PBXIP1-206ENST00000498553 SOGA1O94964 1423 aa28.52■■■□□ 2.16
PBXIP1-206ENST00000498553 RAD54L2Q9Y4B4 1467 aa28.51■■■□□ 2.15
PBXIP1-206ENST00000498553 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
PBXIP1-206ENST00000498553 EIF4G3O43432 1585 aaKnown RBP28.45■■■□□ 2.15
PBXIP1-206ENST00000498553 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.142e-7■■■■■ 41.4
PBXIP1-206ENST00000498553 TOP2BQ02880 1626 aa28.39■■■□□ 2.13
PBXIP1-206ENST00000498553 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
PBXIP1-206ENST00000498553 BIVM-ERCC5R4GMW8 1640 aa28.37■■■□□ 2.13
PBXIP1-206ENST00000498553 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
PBXIP1-206ENST00000498553 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
PBXIP1-206ENST00000498553 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
PBXIP1-206ENST00000498553 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
PBXIP1-206ENST00000498553 GRIN2BQ13224 1484 aa28.2■■■□□ 2.1
PBXIP1-206ENST00000498553 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
PBXIP1-206ENST00000498553 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
PBXIP1-206ENST00000498553 ABCA5Q8WWZ7 1642 aa28.16■■■□□ 2.1
PBXIP1-206ENST00000498553 MAGI1Q96QZ7 1491 aaPredicted RBP28.13■■■□□ 2.09
PBXIP1-206ENST00000498553 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
PBXIP1-206ENST00000498553 FBLN2P98095 1184 aa28.1■■■□□ 2.09
PBXIP1-206ENST00000498553 CHD1O14646 1710 aa28.09■■■□□ 2.09
PBXIP1-206ENST00000498553 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
PBXIP1-206ENST00000498553 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
PBXIP1-206ENST00000498553 ERICH3Q5RHP9 1530 aa27.94■■■□□ 2.06
PBXIP1-206ENST00000498553 ADAMTS12P58397 1594 aa27.9■■■□□ 2.06
PBXIP1-206ENST00000498553 KIF27Q86VH2 1401 aa27.88■■■□□ 2.05
PBXIP1-206ENST00000498553 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
PBXIP1-206ENST00000498553 GRIN2AQ12879 1464 aa27.83■■■□□ 2.04
PBXIP1-206ENST00000498553 CLASP1Q7Z460 1538 aa27.8■■■□□ 2.04
PBXIP1-206ENST00000498553 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
PBXIP1-206ENST00000498553 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
PBXIP1-206ENST00000498553 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
PBXIP1-206ENST00000498553 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
PBXIP1-206ENST00000498553 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
PBXIP1-206ENST00000498553 IGF1RP08069 1367 aa27.75■■■□□ 2.03
PBXIP1-206ENST00000498553 NUP160Q12769 1436 aa27.71■■■□□ 2.03
PBXIP1-206ENST00000498553 CEP170Q5SW79 1584 aa27.68■■■□□ 2.02
PBXIP1-206ENST00000498553 CUL7Q14999 1698 aa27.68■■■□□ 2.02
PBXIP1-206ENST00000498553 CARMIL1Q5VZK9 1371 aa27.6■■■□□ 2.01
PBXIP1-206ENST00000498553 RUSC2Q8N2Y8 1516 aa27.58■■■□□ 2.01
PBXIP1-206ENST00000498553 ARAP1Q96P48 1450 aa27.55■■■□□ 2
PBXIP1-206ENST00000498553 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
PBXIP1-206ENST00000498553 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
PBXIP1-206ENST00000498553 KIAA0586Q9BVV6 1533 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms