RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-215ENST00000498528 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
KDM3A-215ENST00000498528 ABCC9O60706 1549 aa14.17□□□□□ -0.14
KDM3A-215ENST00000498528 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
KDM3A-215ENST00000498528 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
KDM3A-215ENST00000498528 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
KDM3A-215ENST00000498528 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
KDM3A-215ENST00000498528 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
KDM3A-215ENST00000498528 NACADO15069 1562 aa13.13□□□□□ -0.31
KDM3A-215ENST00000498528 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
KDM3A-215ENST00000498528 BICRAQ9NZM4 1560 aa12.92□□□□□ -0.34
KDM3A-215ENST00000498528 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
KDM3A-215ENST00000498528 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
KDM3A-215ENST00000498528 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
KDM3A-215ENST00000498528 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
KDM3A-215ENST00000498528 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
KDM3A-215ENST00000498528 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
KDM3A-215ENST00000498528 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
KDM3A-215ENST00000498528 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
KDM3A-215ENST00000498528 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
KDM3A-215ENST00000498528 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
KDM3A-215ENST00000498528 CUX2O14529 1486 aa12.24□□□□□ -0.45
KDM3A-215ENST00000498528 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
KDM3A-215ENST00000498528 NESP48681 1621 aa12.09□□□□□ -0.47
KDM3A-215ENST00000498528 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
KDM3A-215ENST00000498528 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
KDM3A-215ENST00000498528 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
KDM3A-215ENST00000498528 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
KDM3A-215ENST00000498528 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
KDM3A-215ENST00000498528 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
KDM3A-215ENST00000498528 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
KDM3A-215ENST00000498528 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
KDM3A-215ENST00000498528 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
KDM3A-215ENST00000498528 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
KDM3A-215ENST00000498528 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
KDM3A-215ENST00000498528 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
KDM3A-215ENST00000498528 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
KDM3A-215ENST00000498528 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
KDM3A-215ENST00000498528 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
KDM3A-215ENST00000498528 WDR62O43379 1518 aa11.74□□□□□ -0.53
KDM3A-215ENST00000498528 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
KDM3A-215ENST00000498528 WIZO95785 1651 aa11.7□□□□□ -0.54
KDM3A-215ENST00000498528 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
KDM3A-215ENST00000498528 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
KDM3A-215ENST00000498528 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.56
KDM3A-215ENST00000498528 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.56
KDM3A-215ENST00000498528 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.56
KDM3A-215ENST00000498528 URB2Q14146 1524 aaKnown RBP11.56□□□□□ -0.56
KDM3A-215ENST00000498528 CFTRP13569 1480 aa11.54□□□□□ -0.56
KDM3A-215ENST00000498528 ARHGEF11O15085 1522 aa11.49□□□□□ -0.57
KDM3A-215ENST00000498528 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
KDM3A-215ENST00000498528 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
KDM3A-215ENST00000498528 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
KDM3A-215ENST00000498528 ZNF608Q9ULD9 1512 aaPredicted RBP11.48□□□□□ -0.57
KDM3A-215ENST00000498528 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
KDM3A-215ENST00000498528 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
KDM3A-215ENST00000498528 RSF1Q96T23 1441 aaPredicted RBP11.44□□□□□ -0.58
KDM3A-215ENST00000498528 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
KDM3A-215ENST00000498528 FBLN2P98095 1184 aa11.42□□□□□ -0.58
KDM3A-215ENST00000498528 CHD1O14646 1710 aa11.42□□□□□ -0.58
KDM3A-215ENST00000498528 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
KDM3A-215ENST00000498528 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
KDM3A-215ENST00000498528 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
KDM3A-215ENST00000498528 ARAP1Q96P48 1450 aa11.36□□□□□ -0.59
KDM3A-215ENST00000498528 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
KDM3A-215ENST00000498528 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
KDM3A-215ENST00000498528 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
KDM3A-215ENST00000498528 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
KDM3A-215ENST00000498528 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
KDM3A-215ENST00000498528 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
KDM3A-215ENST00000498528 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
KDM3A-215ENST00000498528 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
KDM3A-215ENST00000498528 CHMP7Q8WUX9 453 aaPredicted RBP11.23□□□□□ -0.61
KDM3A-215ENST00000498528 SOGA1O94964 1423 aa11.22□□□□□ -0.61
KDM3A-215ENST00000498528 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
KDM3A-215ENST00000498528 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
KDM3A-215ENST00000498528 FGD5Q6ZNL6 1462 aa11.18□□□□□ -0.62
KDM3A-215ENST00000498528 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
KDM3A-215ENST00000498528 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
KDM3A-215ENST00000498528 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
KDM3A-215ENST00000498528 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
KDM3A-215ENST00000498528 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
KDM3A-215ENST00000498528 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
KDM3A-215ENST00000498528 CUX1P39880 1505 aa11.11□□□□□ -0.63
KDM3A-215ENST00000498528 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
KDM3A-215ENST00000498528 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
KDM3A-215ENST00000498528 GRIN2AQ12879 1464 aa11□□□□□ -0.65
KDM3A-215ENST00000498528 CEP170Q5SW79 1584 aa11□□□□□ -0.65
KDM3A-215ENST00000498528 KIF13AQ9H1H9 1805 aa10.99□□□□□ -0.65
KDM3A-215ENST00000498528 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
KDM3A-215ENST00000498528 ADAMTS12P58397 1594 aa10.98□□□□□ -0.65
KDM3A-215ENST00000498528 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
KDM3A-215ENST00000498528 NUP160Q12769 1436 aa10.92□□□□□ -0.66
KDM3A-215ENST00000498528 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
KDM3A-215ENST00000498528 FAM69CQ0P6D2 419 aa10.91□□□□□ -0.66
KDM3A-215ENST00000498528 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
KDM3A-215ENST00000498528 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
KDM3A-215ENST00000498528 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
KDM3A-215ENST00000498528 SUPT5HO00267 1087 aaKnown RBP10.89□□□□□ -0.67
KDM3A-215ENST00000498528 TSPOAP1O95153 1857 aa10.89□□□□□ -0.67
KDM3A-215ENST00000498528 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms