RNA–Protein interactions for RNA: ENST00000498472.1

EHD1-212, Transcript of EH domain containing 1, humanhuman

TSL 2

Gene EHD1, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EHD1-212ENST00000498472 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
EHD1-212ENST00000498472 ABCC9O60706 1549 aa26.43■■□□□ 1.82
EHD1-212ENST00000498472 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
EHD1-212ENST00000498472 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
EHD1-212ENST00000498472 NACADO15069 1562 aa24.95■■□□□ 1.58
EHD1-212ENST00000498472 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
EHD1-212ENST00000498472 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
EHD1-212ENST00000498472 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
EHD1-212ENST00000498472 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
EHD1-212ENST00000498472 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
EHD1-212ENST00000498472 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
EHD1-212ENST00000498472 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
EHD1-212ENST00000498472 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
EHD1-212ENST00000498472 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
EHD1-212ENST00000498472 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
EHD1-212ENST00000498472 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
EHD1-212ENST00000498472 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
EHD1-212ENST00000498472 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
EHD1-212ENST00000498472 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
EHD1-212ENST00000498472 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
EHD1-212ENST00000498472 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
EHD1-212ENST00000498472 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
EHD1-212ENST00000498472 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
EHD1-212ENST00000498472 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
EHD1-212ENST00000498472 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
EHD1-212ENST00000498472 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
EHD1-212ENST00000498472 CUX2O14529 1486 aa22.76■■□□□ 1.23
EHD1-212ENST00000498472 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
EHD1-212ENST00000498472 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
EHD1-212ENST00000498472 NESP48681 1621 aa22.7■■□□□ 1.22
EHD1-212ENST00000498472 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
EHD1-212ENST00000498472 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
EHD1-212ENST00000498472 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
EHD1-212ENST00000498472 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
EHD1-212ENST00000498472 WIZO95785 1651 aa22.39■■□□□ 1.17
EHD1-212ENST00000498472 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
EHD1-212ENST00000498472 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.17
EHD1-212ENST00000498472 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
EHD1-212ENST00000498472 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
EHD1-212ENST00000498472 WDR62O43379 1518 aa22.13■■□□□ 1.13
EHD1-212ENST00000498472 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
EHD1-212ENST00000498472 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
EHD1-212ENST00000498472 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
EHD1-212ENST00000498472 CFTRP13569 1480 aa22.1■■□□□ 1.13
EHD1-212ENST00000498472 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
EHD1-212ENST00000498472 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
EHD1-212ENST00000498472 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
EHD1-212ENST00000498472 OSCARQ8IYS5 282 aa21.78■■□□□ 1.08
EHD1-212ENST00000498472 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
EHD1-212ENST00000498472 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
EHD1-212ENST00000498472 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
EHD1-212ENST00000498472 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
EHD1-212ENST00000498472 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
EHD1-212ENST00000498472 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
EHD1-212ENST00000498472 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
EHD1-212ENST00000498472 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.03
EHD1-212ENST00000498472 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
EHD1-212ENST00000498472 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
EHD1-212ENST00000498472 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
EHD1-212ENST00000498472 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
EHD1-212ENST00000498472 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
EHD1-212ENST00000498472 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
EHD1-212ENST00000498472 SOGA1O94964 1423 aa21.39■■□□□ 1.02
EHD1-212ENST00000498472 FBLN2P98095 1184 aa21.38■■□□□ 1.01
EHD1-212ENST00000498472 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
EHD1-212ENST00000498472 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
EHD1-212ENST00000498472 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
EHD1-212ENST00000498472 CUX1P39880 1505 aa21.3■■□□□ 1
EHD1-212ENST00000498472 CHD1O14646 1710 aa21.3■■□□□ 1
EHD1-212ENST00000498472 SUPT5HO00267 1087 aaKnown RBP21.3■■□□□ 1
EHD1-212ENST00000498472 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
EHD1-212ENST00000498472 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
EHD1-212ENST00000498472 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
EHD1-212ENST00000498472 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
EHD1-212ENST00000498472 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
EHD1-212ENST00000498472 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
EHD1-212ENST00000498472 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
EHD1-212ENST00000498472 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
EHD1-212ENST00000498472 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
EHD1-212ENST00000498472 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
EHD1-212ENST00000498472 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
EHD1-212ENST00000498472 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
EHD1-212ENST00000498472 TRHP20396 242 aaPredicted RBP21.05■□□□□ 0.96
EHD1-212ENST00000498472 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
EHD1-212ENST00000498472 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
EHD1-212ENST00000498472 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
EHD1-212ENST00000498472 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
EHD1-212ENST00000498472 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
EHD1-212ENST00000498472 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
EHD1-212ENST00000498472 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
EHD1-212ENST00000498472 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
EHD1-212ENST00000498472 NUP160Q12769 1436 aa20.84■□□□□ 0.93
EHD1-212ENST00000498472 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
EHD1-212ENST00000498472 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
EHD1-212ENST00000498472 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
EHD1-212ENST00000498472 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
EHD1-212ENST00000498472 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
EHD1-212ENST00000498472 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
EHD1-212ENST00000498472 IGF1RP08069 1367 aa20.59■□□□□ 0.89
EHD1-212ENST00000498472 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms