RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 NISCHQ9Y2I1 1504 aa44.19■■■■■ 4.66
SMIM19-206ENST00000498447 ABCC9O60706 1549 aa39.73■■■■□ 3.95
SMIM19-206ENST00000498447 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
SMIM19-206ENST00000498447 RB1CC1Q8TDY2 1594 aa37.8■■■■□ 3.64
SMIM19-206ENST00000498447 NACADO15069 1562 aa37.52■■■■□ 3.6
SMIM19-206ENST00000498447 DNAJC5BQ9UF47 199 aa37.29■■■■□ 3.56
SMIM19-206ENST00000498447 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
SMIM19-206ENST00000498447 MYO15BQ96JP2 1530 aa37■■■■□ 3.51
SMIM19-206ENST00000498447 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.51
SMIM19-206ENST00000498447 UNC13AQ9UPW8 1703 aa36.95■■■■□ 3.51
SMIM19-206ENST00000498447 BICRAQ9NZM4 1560 aa36.71■■■■□ 3.47
SMIM19-206ENST00000498447 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
SMIM19-206ENST00000498447 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
SMIM19-206ENST00000498447 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
SMIM19-206ENST00000498447 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
SMIM19-206ENST00000498447 CC2D2AQ9P2K1 1620 aa35.89■■■■□ 3.34
SMIM19-206ENST00000498447 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
SMIM19-206ENST00000498447 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
SMIM19-206ENST00000498447 NCAPD3P42695 1498 aa34.64■■■■□ 3.14
SMIM19-206ENST00000498447 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
SMIM19-206ENST00000498447 SMARCA4P51532 1647 aa34.49■■■■□ 3.11
SMIM19-206ENST00000498447 SMARCA2P51531 1590 aa34.44■■■■□ 3.1
SMIM19-206ENST00000498447 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
SMIM19-206ENST00000498447 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
SMIM19-206ENST00000498447 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
SMIM19-206ENST00000498447 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
SMIM19-206ENST00000498447 CUX2O14529 1486 aa34.27■■■■□ 3.08
SMIM19-206ENST00000498447 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.06
SMIM19-206ENST00000498447 PEG3Q9GZU2 1588 aa34.16■■■■□ 3.06
SMIM19-206ENST00000498447 NESP48681 1621 aa34.12■■■■□ 3.05
SMIM19-206ENST00000498447 MROH2BQ7Z745 1585 aa34.05■■■■□ 3.04
SMIM19-206ENST00000498447 LAMC3Q9Y6N6 1575 aa33.88■■■■□ 3.01
SMIM19-206ENST00000498447 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
SMIM19-206ENST00000498447 KIF21AQ7Z4S6 1674 aa33.68■■■□□ 2.98
SMIM19-206ENST00000498447 PDS5BQ9NTI5 1447 aa33.67■■■□□ 2.98
SMIM19-206ENST00000498447 WIZO95785 1651 aa33.64■■■□□ 2.98
SMIM19-206ENST00000498447 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
SMIM19-206ENST00000498447 MRC2Q9UBG0 1479 aa33.39■■■□□ 2.94
SMIM19-206ENST00000498447 WDR62O43379 1518 aa33.33■■■□□ 2.93
SMIM19-206ENST00000498447 RSF1Q96T23 1441 aaPredicted RBP33.32■■■□□ 2.92
SMIM19-206ENST00000498447 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
SMIM19-206ENST00000498447 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
SMIM19-206ENST00000498447 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
SMIM19-206ENST00000498447 CFTRP13569 1480 aa33.19■■■□□ 2.9
SMIM19-206ENST00000498447 URB2Q14146 1524 aaKnown RBP32.94■■■□□ 2.86
SMIM19-206ENST00000498447 PRDM2Q13029 1718 aa32.88■■■□□ 2.85
SMIM19-206ENST00000498447 CCDC88BA6NC98 1476 aa32.83■■■□□ 2.85
SMIM19-206ENST00000498447 TRIM41Q8WV44 630 aa32.75■■■□□ 2.83
SMIM19-206ENST00000498447 OSCARQ8IYS5 282 aa32.66■■■□□ 2.82
SMIM19-206ENST00000498447 IFT140Q96RY7 1462 aa32.59■■■□□ 2.81
SMIM19-206ENST00000498447 TOPBP1Q92547 1522 aa32.57■■■□□ 2.8
SMIM19-206ENST00000498447 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
SMIM19-206ENST00000498447 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
SMIM19-206ENST00000498447 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
SMIM19-206ENST00000498447 EIF4G3O43432 1585 aaKnown RBP32.38■■■□□ 2.77
SMIM19-206ENST00000498447 TARBP1Q13395 1621 aaKnown RBP32.29■■■□□ 2.76
SMIM19-206ENST00000498447 RIMBP3CA6NJZ7 1639 aa32.28■■■□□ 2.76
SMIM19-206ENST00000498447 RIMBP3BA6NNM3 1639 aa32.28■■■□□ 2.76
SMIM19-206ENST00000498447 RIMBP3Q9UFD9 1639 aa32.28■■■□□ 2.76
SMIM19-206ENST00000498447 POLA1P09884 1462 aaPredicted RBP32.24■■■□□ 2.75
SMIM19-206ENST00000498447 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
SMIM19-206ENST00000498447 ARHGEF11O15085 1522 aa32.18■■■□□ 2.74
SMIM19-206ENST00000498447 CHD1O14646 1710 aa32.14■■■□□ 2.74
SMIM19-206ENST00000498447 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
SMIM19-206ENST00000498447 SOGA1O94964 1423 aa32.08■■■□□ 2.73
SMIM19-206ENST00000498447 FGD5Q6ZNL6 1462 aa32.03■■■□□ 2.72
SMIM19-206ENST00000498447 TDRD9Q8NDG6 1382 aaKnown RBP32.02■■■□□ 2.72
SMIM19-206ENST00000498447 FBLN2P98095 1184 aa32.01■■■□□ 2.71
SMIM19-206ENST00000498447 CUX1P39880 1505 aa32■■■□□ 2.71
SMIM19-206ENST00000498447 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
SMIM19-206ENST00000498447 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
SMIM19-206ENST00000498447 CYB5RLQ6IPT4 315 aa31.9■■■□□ 2.7
SMIM19-206ENST00000498447 AEBP2Q6ZN18 517 aaPredicted RBP31.88■■■□□ 2.69
SMIM19-206ENST00000498447 ARAP1Q96P48 1450 aa31.86■■■□□ 2.69
SMIM19-206ENST00000498447 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
SMIM19-206ENST00000498447 GRIN2BQ13224 1484 aa31.82■■■□□ 2.68
SMIM19-206ENST00000498447 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
SMIM19-206ENST00000498447 CLASP1Q7Z460 1538 aa31.78■■■□□ 2.68
SMIM19-206ENST00000498447 CHMP7Q8WUX9 453 aaPredicted RBP31.77■■■□□ 2.68
SMIM19-206ENST00000498447 SYNJ1O43426 1573 aa31.74■■■□□ 2.67
SMIM19-206ENST00000498447 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
SMIM19-206ENST00000498447 PBRM1Q86U86 1689 aa31.7■■■□□ 2.67
SMIM19-206ENST00000498447 GAPVD1Q14C86 1478 aa31.7■■■□□ 2.66
SMIM19-206ENST00000498447 ABCA10Q8WWZ4 1543 aa31.67■■■□□ 2.66
SMIM19-206ENST00000498447 ABCA5Q8WWZ7 1642 aa31.64■■■□□ 2.65
SMIM19-206ENST00000498447 TRHP20396 242 aaPredicted RBP31.56■■■□□ 2.64
SMIM19-206ENST00000498447 WRNQ14191 1432 aaPredicted RBP eCLIP31.52■■■□□ 2.64
SMIM19-206ENST00000498447 BIVM-ERCC5R4GMW8 1640 aa31.48■■■□□ 2.63
SMIM19-206ENST00000498447 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
SMIM19-206ENST00000498447 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
SMIM19-206ENST00000498447 ADAMTS12P58397 1594 aa31.41■■■□□ 2.62
SMIM19-206ENST00000498447 CEP170Q5SW79 1584 aa31.31■■■□□ 2.6
SMIM19-206ENST00000498447 NUP160Q12769 1436 aa31.31■■■□□ 2.6
SMIM19-206ENST00000498447 FHAD1B1AJZ9 1412 aa31.29■■■□□ 2.6
SMIM19-206ENST00000498447 ERCC6L2Q5T890 1561 aa31.27■■■□□ 2.6
SMIM19-206ENST00000498447 ERICH3Q5RHP9 1530 aa31.27■■■□□ 2.6
SMIM19-206ENST00000498447 SHROOM2Q13796 1616 aa31.19■■■□□ 2.58
SMIM19-206ENST00000498447 PRG4Q92954 1404 aaPredicted RBP31■■■□□ 2.55
SMIM19-206ENST00000498447 RUSC2Q8N2Y8 1516 aa30.97■■■□□ 2.55
SMIM19-206ENST00000498447 JPH4Q96JJ6 628 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms