RNA–Protein interactions for RNA: ENST00000498396.2

SLFN11-206, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-206ENST00000498396 NISCHQ9Y2I1 1504 aa33.45■■■□□ 2.95
SLFN11-206ENST00000498396 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
SLFN11-206ENST00000498396 ABCC9O60706 1549 aa29.11■■■□□ 2.25
SLFN11-206ENST00000498396 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
SLFN11-206ENST00000498396 DCAF8L2P0C7V8 631 aa27.96■■■□□ 2.07
SLFN11-206ENST00000498396 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.06
SLFN11-206ENST00000498396 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.05
SLFN11-206ENST00000498396 NACADO15069 1562 aa27.86■■■□□ 2.05
SLFN11-206ENST00000498396 MYO15BQ96JP2 1530 aa27.68■■■□□ 2.02
SLFN11-206ENST00000498396 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
SLFN11-206ENST00000498396 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
SLFN11-206ENST00000498396 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
SLFN11-206ENST00000498396 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
SLFN11-206ENST00000498396 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
SLFN11-206ENST00000498396 DNAJC5BQ9UF47 199 aa26.76■■□□□ 1.87
SLFN11-206ENST00000498396 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.87
SLFN11-206ENST00000498396 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
SLFN11-206ENST00000498396 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
SLFN11-206ENST00000498396 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
SLFN11-206ENST00000498396 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
SLFN11-206ENST00000498396 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
SLFN11-206ENST00000498396 BAZ1AQ9NRL2 1556 aaPredicted RBP25.87■■□□□ 1.73
SLFN11-206ENST00000498396 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
SLFN11-206ENST00000498396 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
SLFN11-206ENST00000498396 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
SLFN11-206ENST00000498396 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
SLFN11-206ENST00000498396 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
SLFN11-206ENST00000498396 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
SLFN11-206ENST00000498396 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
SLFN11-206ENST00000498396 WIZO95785 1651 aa25.55■■□□□ 1.68
SLFN11-206ENST00000498396 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
SLFN11-206ENST00000498396 NESP48681 1621 aa25.24■■□□□ 1.63
SLFN11-206ENST00000498396 TOP2AP11388 1531 aaKnown RBP25.23■■□□□ 1.63
SLFN11-206ENST00000498396 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
SLFN11-206ENST00000498396 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
SLFN11-206ENST00000498396 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
SLFN11-206ENST00000498396 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
SLFN11-206ENST00000498396 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
SLFN11-206ENST00000498396 CFTRP13569 1480 aa24.89■■□□□ 1.57
SLFN11-206ENST00000498396 KIF21AQ7Z4S6 1674 aa24.86■■□□□ 1.57
SLFN11-206ENST00000498396 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
SLFN11-206ENST00000498396 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
SLFN11-206ENST00000498396 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
SLFN11-206ENST00000498396 CUX2O14529 1486 aa24.69■■□□□ 1.54
SLFN11-206ENST00000498396 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
SLFN11-206ENST00000498396 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
SLFN11-206ENST00000498396 PRDM2Q13029 1718 aa24.6■■□□□ 1.53
SLFN11-206ENST00000498396 WDR62O43379 1518 aa24.58■■□□□ 1.53
SLFN11-206ENST00000498396 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
SLFN11-206ENST00000498396 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
SLFN11-206ENST00000498396 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
SLFN11-206ENST00000498396 CUX1P39880 1505 aa24.24■■□□□ 1.47
SLFN11-206ENST00000498396 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
SLFN11-206ENST00000498396 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
SLFN11-206ENST00000498396 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
SLFN11-206ENST00000498396 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
SLFN11-206ENST00000498396 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
SLFN11-206ENST00000498396 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
SLFN11-206ENST00000498396 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
SLFN11-206ENST00000498396 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
SLFN11-206ENST00000498396 SOGA1O94964 1423 aa24.04■■□□□ 1.44
SLFN11-206ENST00000498396 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
SLFN11-206ENST00000498396 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.43
SLFN11-206ENST00000498396 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
SLFN11-206ENST00000498396 TOP2BQ02880 1626 aa23.97■■□□□ 1.43
SLFN11-206ENST00000498396 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
SLFN11-206ENST00000498396 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
SLFN11-206ENST00000498396 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
SLFN11-206ENST00000498396 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
SLFN11-206ENST00000498396 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
SLFN11-206ENST00000498396 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
SLFN11-206ENST00000498396 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
SLFN11-206ENST00000498396 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
SLFN11-206ENST00000498396 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
SLFN11-206ENST00000498396 GRIN2BQ13224 1484 aa23.74■■□□□ 1.39
SLFN11-206ENST00000498396 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
SLFN11-206ENST00000498396 OSCARQ8IYS5 282 aa23.67■■□□□ 1.38
SLFN11-206ENST00000498396 CHD1O14646 1710 aa23.67■■□□□ 1.38
SLFN11-206ENST00000498396 FBLN2P98095 1184 aa23.66■■□□□ 1.38
SLFN11-206ENST00000498396 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
SLFN11-206ENST00000498396 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
SLFN11-206ENST00000498396 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
SLFN11-206ENST00000498396 ADAMTS12P58397 1594 aa23.56■■□□□ 1.36
SLFN11-206ENST00000498396 CHMP7Q8WUX9 453 aaPredicted RBP23.55■■□□□ 1.36
SLFN11-206ENST00000498396 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
SLFN11-206ENST00000498396 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
SLFN11-206ENST00000498396 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
SLFN11-206ENST00000498396 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
SLFN11-206ENST00000498396 IGF1RP08069 1367 aa23.46■■□□□ 1.35
SLFN11-206ENST00000498396 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
SLFN11-206ENST00000498396 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
SLFN11-206ENST00000498396 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
SLFN11-206ENST00000498396 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
SLFN11-206ENST00000498396 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
SLFN11-206ENST00000498396 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
SLFN11-206ENST00000498396 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
SLFN11-206ENST00000498396 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
SLFN11-206ENST00000498396 NUP160Q12769 1436 aa23.35■■□□□ 1.33
SLFN11-206ENST00000498396 CUL7Q14999 1698 aa23.3■■□□□ 1.32
SLFN11-206ENST00000498396 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms