RNA–Protein interactions for RNA: ENST00000498274.5

PCNP-207, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 786 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-207ENST00000498274 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.01
PCNP-207ENST00000498274 ABCC9O60706 1549 aa41.88■■■■■ 4.29
PCNP-207ENST00000498274 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.23
PCNP-207ENST00000498274 RB1CC1Q8TDY2 1594 aa39.66■■■■□ 3.94
PCNP-207ENST00000498274 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
PCNP-207ENST00000498274 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
PCNP-207ENST00000498274 NACADO15069 1562 aa39.33■■■■□ 3.89
PCNP-207ENST00000498274 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
PCNP-207ENST00000498274 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
PCNP-207ENST00000498274 MYO15BQ96JP2 1530 aa38.69■■■■□ 3.78
PCNP-207ENST00000498274 BICRAQ9NZM4 1560 aa38.53■■■■□ 3.76
PCNP-207ENST00000498274 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
PCNP-207ENST00000498274 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
PCNP-207ENST00000498274 SCRIBQ14160 1630 aa38.02■■■■□ 3.68
PCNP-207ENST00000498274 SHROOM4Q9ULL8 1493 aa37.87■■■■□ 3.65
PCNP-207ENST00000498274 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
PCNP-207ENST00000498274 CECR2Q9BXF3 1484 aa37.68■■■■□ 3.62
PCNP-207ENST00000498274 EIF4G1Q04637 1599 aaKnown RBP37.6■■■■□ 3.61
PCNP-207ENST00000498274 NCAPD3P42695 1498 aa36.37■■■■□ 3.41
PCNP-207ENST00000498274 ATAD2BQ9ULI0 1458 aa36.29■■■■□ 3.4
PCNP-207ENST00000498274 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
PCNP-207ENST00000498274 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
PCNP-207ENST00000498274 ERCC6Q03468 1493 aa36.14■■■■□ 3.38
PCNP-207ENST00000498274 SMARCA2P51531 1590 aa36.1■■■■□ 3.37
PCNP-207ENST00000498274 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
PCNP-207ENST00000498274 CUX2O14529 1486 aa35.99■■■■□ 3.35
PCNP-207ENST00000498274 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
PCNP-207ENST00000498274 NESP48681 1621 aa35.94■■■■□ 3.34
PCNP-207ENST00000498274 BAZ1BQ9UIG0 1483 aaKnown RBP35.93■■■■□ 3.34
PCNP-207ENST00000498274 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
PCNP-207ENST00000498274 PEG3Q9GZU2 1588 aa35.75■■■■□ 3.31
PCNP-207ENST00000498274 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.28
PCNP-207ENST00000498274 THOC2Q8NI27 1593 aaKnown RBP35.46■■■■□ 3.27
PCNP-207ENST00000498274 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
PCNP-207ENST00000498274 KIF21AQ7Z4S6 1674 aa35.35■■■■□ 3.25
PCNP-207ENST00000498274 WIZO95785 1651 aa35.33■■■■□ 3.25
PCNP-207ENST00000498274 CADPSQ9ULU8 1353 aa35.31■■■■□ 3.24
PCNP-207ENST00000498274 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
PCNP-207ENST00000498274 RSF1Q96T23 1441 aaPredicted RBP35.02■■■■□ 3.2
PCNP-207ENST00000498274 WDR62O43379 1518 aa34.96■■■■□ 3.19
PCNP-207ENST00000498274 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
PCNP-207ENST00000498274 FANCD2Q9BXW9 1451 aa34.92■■■■□ 3.18
PCNP-207ENST00000498274 TOP2AP11388 1531 aaKnown RBP34.85■■■■□ 3.17
PCNP-207ENST00000498274 CFTRP13569 1480 aa34.84■■■■□ 3.17
PCNP-207ENST00000498274 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
PCNP-207ENST00000498274 URB2Q14146 1524 aaKnown RBP34.64■■■■□ 3.14
PCNP-207ENST00000498274 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
PCNP-207ENST00000498274 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
PCNP-207ENST00000498274 PRDM2Q13029 1718 aa34.31■■■■□ 3.08
PCNP-207ENST00000498274 ZNF608Q9ULD9 1512 aaPredicted RBP34.27■■■■□ 3.08
PCNP-207ENST00000498274 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
PCNP-207ENST00000498274 TOPBP1Q92547 1522 aa34.23■■■■□ 3.07
PCNP-207ENST00000498274 ABCC8Q09428 1581 aa34.06■■■■□ 3.04
PCNP-207ENST00000498274 DNMBPQ6XZF7 1577 aa34.05■■■■□ 3.04
PCNP-207ENST00000498274 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
PCNP-207ENST00000498274 AQRO60306 1485 aaKnown RBP eCLIP33.97■■■■□ 3.037e-14■■■■□ 21.5
PCNP-207ENST00000498274 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
PCNP-207ENST00000498274 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
PCNP-207ENST00000498274 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
PCNP-207ENST00000498274 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
PCNP-207ENST00000498274 TARBP1Q13395 1621 aaKnown RBP33.87■■■■□ 3.01
PCNP-207ENST00000498274 FBLN2P98095 1184 aa33.86■■■■□ 3.01
PCNP-207ENST00000498274 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
PCNP-207ENST00000498274 RAD54L2Q9Y4B4 1467 aa33.84■■■■□ 3.01
PCNP-207ENST00000498274 TDRD9Q8NDG6 1382 aaKnown RBP33.77■■■■□ 3
PCNP-207ENST00000498274 SOGA1O94964 1423 aa33.77■■■■□ 3
PCNP-207ENST00000498274 CYB5RLQ6IPT4 315 aa33.73■■■□□ 2.99
PCNP-207ENST00000498274 CHD1O14646 1710 aa33.72■■■□□ 2.99
PCNP-207ENST00000498274 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
PCNP-207ENST00000498274 CUX1P39880 1505 aa33.62■■■□□ 2.97
PCNP-207ENST00000498274 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
PCNP-207ENST00000498274 SNAPC4Q5SXM2 1469 aa33.58■■■□□ 2.97
PCNP-207ENST00000498274 ARAP1Q96P48 1450 aa33.52■■■□□ 2.96
PCNP-207ENST00000498274 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
PCNP-207ENST00000498274 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
PCNP-207ENST00000498274 WDR97A6NE52 1622 aa33.42■■■□□ 2.94
PCNP-207ENST00000498274 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
PCNP-207ENST00000498274 MAGI1Q96QZ7 1491 aaPredicted RBP33.4■■■□□ 2.94
PCNP-207ENST00000498274 CLASP1Q7Z460 1538 aa33.35■■■□□ 2.93
PCNP-207ENST00000498274 SYNJ2O15056 1496 aa33.32■■■□□ 2.92
PCNP-207ENST00000498274 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
PCNP-207ENST00000498274 SYNJ1O43426 1573 aa33.32■■■□□ 2.92
PCNP-207ENST00000498274 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
PCNP-207ENST00000498274 PBRM1Q86U86 1689 aa33.22■■■□□ 2.91
PCNP-207ENST00000498274 ABCA5Q8WWZ7 1642 aa33.16■■■□□ 2.9
PCNP-207ENST00000498274 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
PCNP-207ENST00000498274 GRIN2AQ12879 1464 aa33■■■□□ 2.87
PCNP-207ENST00000498274 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
PCNP-207ENST00000498274 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
PCNP-207ENST00000498274 ADAMTS12P58397 1594 aa32.94■■■□□ 2.86
PCNP-207ENST00000498274 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
PCNP-207ENST00000498274 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
PCNP-207ENST00000498274 FHAD1B1AJZ9 1412 aa32.88■■■□□ 2.85
PCNP-207ENST00000498274 NUP160Q12769 1436 aa32.87■■■□□ 2.85
PCNP-207ENST00000498274 ERICH3Q5RHP9 1530 aa32.78■■■□□ 2.84
PCNP-207ENST00000498274 SHROOM2Q13796 1616 aa32.67■■■□□ 2.82
PCNP-207ENST00000498274 PRG4Q92954 1404 aaPredicted RBP32.65■■■□□ 2.82
PCNP-207ENST00000498274 JPH4Q96JJ6 628 aa32.63■■■□□ 2.81
PCNP-207ENST00000498274 AEBP2Q6ZN18 517 aaPredicted RBP32.48■■■□□ 2.79
PCNP-207ENST00000498274 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms