RNA–Protein interactions for RNA: ENST00000498274.5

PCNP-207, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-207ENST00000498274 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.01
PCNP-207ENST00000498274 ABCC9O60706 1549 aa41.88■■■■■ 4.29
PCNP-207ENST00000498274 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.23
PCNP-207ENST00000498274 RB1CC1Q8TDY2 1594 aa39.66■■■■□ 3.94
PCNP-207ENST00000498274 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
PCNP-207ENST00000498274 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
PCNP-207ENST00000498274 NACADO15069 1562 aa39.33■■■■□ 3.89
PCNP-207ENST00000498274 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
PCNP-207ENST00000498274 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
PCNP-207ENST00000498274 MYO15BQ96JP2 1530 aa38.69■■■■□ 3.78
PCNP-207ENST00000498274 BICRAQ9NZM4 1560 aa38.53■■■■□ 3.76
PCNP-207ENST00000498274 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
PCNP-207ENST00000498274 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
PCNP-207ENST00000498274 SCRIBQ14160 1630 aa38.02■■■■□ 3.68
PCNP-207ENST00000498274 SHROOM4Q9ULL8 1493 aa37.87■■■■□ 3.65
PCNP-207ENST00000498274 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
PCNP-207ENST00000498274 CECR2Q9BXF3 1484 aa37.68■■■■□ 3.62
PCNP-207ENST00000498274 EIF4G1Q04637 1599 aaKnown RBP37.6■■■■□ 3.61
PCNP-207ENST00000498274 NCAPD3P42695 1498 aa36.37■■■■□ 3.41
PCNP-207ENST00000498274 ATAD2BQ9ULI0 1458 aa36.29■■■■□ 3.4
PCNP-207ENST00000498274 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
PCNP-207ENST00000498274 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
PCNP-207ENST00000498274 ERCC6Q03468 1493 aa36.14■■■■□ 3.38
PCNP-207ENST00000498274 SMARCA2P51531 1590 aa36.1■■■■□ 3.37
PCNP-207ENST00000498274 HMGXB3Q12766 1538 aa36.03■■■■□ 3.36
PCNP-207ENST00000498274 CUX2O14529 1486 aa35.99■■■■□ 3.35
PCNP-207ENST00000498274 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
PCNP-207ENST00000498274 NESP48681 1621 aa35.94■■■■□ 3.34
PCNP-207ENST00000498274 BAZ1BQ9UIG0 1483 aaKnown RBP35.93■■■■□ 3.34
PCNP-207ENST00000498274 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
PCNP-207ENST00000498274 PEG3Q9GZU2 1588 aa35.75■■■■□ 3.31
PCNP-207ENST00000498274 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.28
PCNP-207ENST00000498274 THOC2Q8NI27 1593 aaKnown RBP35.46■■■■□ 3.27
PCNP-207ENST00000498274 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
PCNP-207ENST00000498274 KIF21AQ7Z4S6 1674 aa35.35■■■■□ 3.25
PCNP-207ENST00000498274 WIZO95785 1651 aa35.33■■■■□ 3.25
PCNP-207ENST00000498274 CADPSQ9ULU8 1353 aa35.31■■■■□ 3.24
PCNP-207ENST00000498274 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
PCNP-207ENST00000498274 RSF1Q96T23 1441 aaPredicted RBP35.02■■■■□ 3.2
PCNP-207ENST00000498274 WDR62O43379 1518 aa34.96■■■■□ 3.19
PCNP-207ENST00000498274 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
PCNP-207ENST00000498274 FANCD2Q9BXW9 1451 aa34.92■■■■□ 3.18
PCNP-207ENST00000498274 TOP2AP11388 1531 aaKnown RBP34.85■■■■□ 3.17
PCNP-207ENST00000498274 CFTRP13569 1480 aa34.84■■■■□ 3.17
PCNP-207ENST00000498274 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
PCNP-207ENST00000498274 URB2Q14146 1524 aaKnown RBP34.64■■■■□ 3.14
PCNP-207ENST00000498274 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
PCNP-207ENST00000498274 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
PCNP-207ENST00000498274 PRDM2Q13029 1718 aa34.31■■■■□ 3.08
PCNP-207ENST00000498274 ZNF608Q9ULD9 1512 aaPredicted RBP34.27■■■■□ 3.08
PCNP-207ENST00000498274 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
PCNP-207ENST00000498274 TOPBP1Q92547 1522 aa34.23■■■■□ 3.07
PCNP-207ENST00000498274 ABCC8Q09428 1581 aa34.06■■■■□ 3.04
PCNP-207ENST00000498274 DNMBPQ6XZF7 1577 aa34.05■■■■□ 3.04
PCNP-207ENST00000498274 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
PCNP-207ENST00000498274 AQRO60306 1485 aaKnown RBP eCLIP33.97■■■■□ 3.037e-14■■■■□ 21.5
PCNP-207ENST00000498274 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
PCNP-207ENST00000498274 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
PCNP-207ENST00000498274 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
PCNP-207ENST00000498274 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
PCNP-207ENST00000498274 TARBP1Q13395 1621 aaKnown RBP33.87■■■■□ 3.01
PCNP-207ENST00000498274 FBLN2P98095 1184 aa33.86■■■■□ 3.01
PCNP-207ENST00000498274 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
PCNP-207ENST00000498274 RAD54L2Q9Y4B4 1467 aa33.84■■■■□ 3.01
PCNP-207ENST00000498274 TDRD9Q8NDG6 1382 aaKnown RBP33.77■■■■□ 3
PCNP-207ENST00000498274 SOGA1O94964 1423 aa33.77■■■■□ 3
PCNP-207ENST00000498274 CYB5RLQ6IPT4 315 aa33.73■■■□□ 2.99
PCNP-207ENST00000498274 CHD1O14646 1710 aa33.72■■■□□ 2.99
PCNP-207ENST00000498274 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
PCNP-207ENST00000498274 CUX1P39880 1505 aa33.62■■■□□ 2.97
PCNP-207ENST00000498274 SUPT5HO00267 1087 aaKnown RBP33.59■■■□□ 2.97
PCNP-207ENST00000498274 SNAPC4Q5SXM2 1469 aa33.58■■■□□ 2.97
PCNP-207ENST00000498274 ARAP1Q96P48 1450 aa33.52■■■□□ 2.96
PCNP-207ENST00000498274 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
PCNP-207ENST00000498274 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
PCNP-207ENST00000498274 WDR97A6NE52 1622 aa33.42■■■□□ 2.94
PCNP-207ENST00000498274 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
PCNP-207ENST00000498274 MAGI1Q96QZ7 1491 aaPredicted RBP33.4■■■□□ 2.94
PCNP-207ENST00000498274 CLASP1Q7Z460 1538 aa33.35■■■□□ 2.93
PCNP-207ENST00000498274 SYNJ2O15056 1496 aa33.32■■■□□ 2.92
PCNP-207ENST00000498274 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
PCNP-207ENST00000498274 SYNJ1O43426 1573 aa33.32■■■□□ 2.92
PCNP-207ENST00000498274 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
PCNP-207ENST00000498274 PBRM1Q86U86 1689 aa33.22■■■□□ 2.91
PCNP-207ENST00000498274 ABCA5Q8WWZ7 1642 aa33.16■■■□□ 2.9
PCNP-207ENST00000498274 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
PCNP-207ENST00000498274 GRIN2AQ12879 1464 aa33■■■□□ 2.87
PCNP-207ENST00000498274 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
PCNP-207ENST00000498274 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
PCNP-207ENST00000498274 ADAMTS12P58397 1594 aa32.94■■■□□ 2.86
PCNP-207ENST00000498274 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
PCNP-207ENST00000498274 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
PCNP-207ENST00000498274 FHAD1B1AJZ9 1412 aa32.88■■■□□ 2.85
PCNP-207ENST00000498274 NUP160Q12769 1436 aa32.87■■■□□ 2.85
PCNP-207ENST00000498274 ERICH3Q5RHP9 1530 aa32.78■■■□□ 2.84
PCNP-207ENST00000498274 SHROOM2Q13796 1616 aa32.67■■■□□ 2.82
PCNP-207ENST00000498274 PRG4Q92954 1404 aaPredicted RBP32.65■■■□□ 2.82
PCNP-207ENST00000498274 JPH4Q96JJ6 628 aa32.63■■■□□ 2.81
PCNP-207ENST00000498274 AEBP2Q6ZN18 517 aaPredicted RBP32.48■■■□□ 2.79
PCNP-207ENST00000498274 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms