RNA–Protein interactions for RNA: ENST00000498244.1

SLC22A18-213, Transcript of solute carrier family 22 member 18, humanhuman

TSL 2

Gene SLC22A18, Length 325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A18-213ENST00000498244 NISCHQ9Y2I1 1504 aa56.37■■■■■ 6.61
SLC22A18-213ENST00000498244 CCDC180Q9P1Z9 1646 aa50.32■■■■■ 5.65
SLC22A18-213ENST00000498244 ABCC9O60706 1549 aa50.26■■■■■ 5.64
SLC22A18-213ENST00000498244 DCAF8L2P0C7V8 631 aa47.88■■■■■ 5.26
SLC22A18-213ENST00000498244 RB1CC1Q8TDY2 1594 aa47.88■■■■■ 5.25
SLC22A18-213ENST00000498244 NACADO15069 1562 aa47.59■■■■■ 5.21
SLC22A18-213ENST00000498244 PABPN1Q86U42 306 aaKnown RBP eCLIP46.97■■■■■ 5.11
SLC22A18-213ENST00000498244 MYO15BQ96JP2 1530 aa46.95■■■■■ 5.11
SLC22A18-213ENST00000498244 DNAJC5BQ9UF47 199 aa46.85■■■■■ 5.09
SLC22A18-213ENST00000498244 ZCCHC6Q5VYS8 1495 aaKnown RBP46.74■■■■■ 5.07
SLC22A18-213ENST00000498244 UNC13AQ9UPW8 1703 aa46.63■■■■■ 5.06
SLC22A18-213ENST00000498244 DCAF1Q9Y4B6 1507 aa46.49■■■■■ 5.03
SLC22A18-213ENST00000498244 BICRAQ9NZM4 1560 aa46.36■■■■■ 5.01
SLC22A18-213ENST00000498244 SCRIBQ14160 1630 aa46.05■■■■■ 4.96
SLC22A18-213ENST00000498244 SHROOM4Q9ULL8 1493 aa45.76■■■■■ 4.92
SLC22A18-213ENST00000498244 CC2D2AQ9P2K1 1620 aa45.3■■■■■ 4.84
SLC22A18-213ENST00000498244 EIF4G1Q04637 1599 aaKnown RBP45.28■■■■■ 4.84
SLC22A18-213ENST00000498244 CECR2Q9BXF3 1484 aa45.22■■■■■ 4.83
SLC22A18-213ENST00000498244 NCAPD3P42695 1498 aa43.95■■■■■ 4.63
SLC22A18-213ENST00000498244 ATAD2BQ9ULI0 1458 aa43.89■■■■■ 4.62
SLC22A18-213ENST00000498244 SMARCA4P51532 1647 aa43.87■■■■■ 4.61
SLC22A18-213ENST00000498244 SMARCA2P51531 1590 aa43.77■■■■■ 4.6
SLC22A18-213ENST00000498244 BAZ1AQ9NRL2 1556 aaPredicted RBP43.75■■■■■ 4.59
SLC22A18-213ENST00000498244 HMGXB3Q12766 1538 aa43.59■■■■■ 4.57
SLC22A18-213ENST00000498244 BAZ1BQ9UIG0 1483 aaKnown RBP43.54■■■■■ 4.56
SLC22A18-213ENST00000498244 MROH2BQ7Z745 1585 aa43.46■■■■■ 4.55
SLC22A18-213ENST00000498244 ERCC6Q03468 1493 aa43.43■■■■■ 4.54
SLC22A18-213ENST00000498244 PEG3Q9GZU2 1588 aa43.36■■■■■ 4.53
SLC22A18-213ENST00000498244 NESP48681 1621 aa43.22■■■■■ 4.51
SLC22A18-213ENST00000498244 CUX2O14529 1486 aa43.08■■■■■ 4.49
SLC22A18-213ENST00000498244 WIZO95785 1651 aa42.95■■■■■ 4.47
SLC22A18-213ENST00000498244 LAMC3Q9Y6N6 1575 aa42.9■■■■■ 4.46
SLC22A18-213ENST00000498244 DNAJC5Q9H3Z4 198 aa42.81■■■■■ 4.44
SLC22A18-213ENST00000498244 PDS5BQ9NTI5 1447 aa42.77■■■■■ 4.44
SLC22A18-213ENST00000498244 CADPSQ9ULU8 1353 aa42.72■■■■■ 4.43
SLC22A18-213ENST00000498244 RSF1Q96T23 1441 aaPredicted RBP42.71■■■■■ 4.43
SLC22A18-213ENST00000498244 KIF21AQ7Z4S6 1674 aa42.57■■■■■ 4.4
SLC22A18-213ENST00000498244 THOC2Q8NI27 1593 aaKnown RBP42.56■■■■■ 4.4
SLC22A18-213ENST00000498244 TOP2AP11388 1531 aaKnown RBP42.41■■■■■ 4.38
SLC22A18-213ENST00000498244 MRC2Q9UBG0 1479 aa42.3■■■■■ 4.36
SLC22A18-213ENST00000498244 CEP164Q9UPV0 1460 aa42.23■■■■■ 4.35
SLC22A18-213ENST00000498244 CFTRP13569 1480 aa42.22■■■■■ 4.35
SLC22A18-213ENST00000498244 FANCD2Q9BXW9 1451 aa42.22■■■■■ 4.35
SLC22A18-213ENST00000498244 WDR62O43379 1518 aa42.11■■■■■ 4.33
SLC22A18-213ENST00000498244 CCDC88BA6NC98 1476 aa42■■■■■ 4.31
SLC22A18-213ENST00000498244 URB2Q14146 1524 aaKnown RBP41.79■■■■■ 4.28
SLC22A18-213ENST00000498244 PRDM2Q13029 1718 aa41.66■■■■■ 4.26
SLC22A18-213ENST00000498244 TOPBP1Q92547 1522 aa41.41■■■■■ 4.22
SLC22A18-213ENST00000498244 OSCARQ8IYS5 282 aa41.38■■■■■ 4.21
SLC22A18-213ENST00000498244 ABCC8Q09428 1581 aa41.37■■■■■ 4.21
SLC22A18-213ENST00000498244 IFT140Q96RY7 1462 aa41.37■■■■■ 4.21
SLC22A18-213ENST00000498244 SUPT5HO00267 1087 aaKnown RBP41.37■■■■■ 4.21
SLC22A18-213ENST00000498244 ZNF608Q9ULD9 1512 aaPredicted RBP41.27■■■■■ 4.2
SLC22A18-213ENST00000498244 DNMBPQ6XZF7 1577 aa41.26■■■■■ 4.2
SLC22A18-213ENST00000498244 TRIM41Q8WV44 630 aa41.25■■■■■ 4.19
SLC22A18-213ENST00000498244 POLA1P09884 1462 aaPredicted RBP41.01■■■■■ 4.16
SLC22A18-213ENST00000498244 AQRO60306 1485 aaKnown RBP eCLIP41■■■■■ 4.15
SLC22A18-213ENST00000498244 EIF4G3O43432 1585 aaKnown RBP40.98■■■■■ 4.15
SLC22A18-213ENST00000498244 SOGA1O94964 1423 aa40.94■■■■■ 4.14
SLC22A18-213ENST00000498244 TARBP1Q13395 1621 aaKnown RBP40.93■■■■■ 4.14
SLC22A18-213ENST00000498244 RAD54L2Q9Y4B4 1467 aa40.93■■■■■ 4.14
SLC22A18-213ENST00000498244 FBLN2P98095 1184 aa40.89■■■■■ 4.14
SLC22A18-213ENST00000498244 TDRD9Q8NDG6 1382 aaKnown RBP40.85■■■■■ 4.13
SLC22A18-213ENST00000498244 FGD5Q6ZNL6 1462 aa40.83■■■■■ 4.13
SLC22A18-213ENST00000498244 CUX1P39880 1505 aa40.8■■■■■ 4.12
SLC22A18-213ENST00000498244 CHD1O14646 1710 aa40.6■■■■■ 4.09
SLC22A18-213ENST00000498244 RIMBP3CA6NJZ7 1639 aa40.6■■■■■ 4.09
SLC22A18-213ENST00000498244 RIMBP3BA6NNM3 1639 aa40.6■■■■■ 4.09
SLC22A18-213ENST00000498244 RIMBP3Q9UFD9 1639 aa40.6■■■■■ 4.09
SLC22A18-213ENST00000498244 CHMP7Q8WUX9 453 aaPredicted RBP40.57■■■■■ 4.09
SLC22A18-213ENST00000498244 SNAPC4Q5SXM2 1469 aa40.55■■■■■ 4.08
SLC22A18-213ENST00000498244 ARHGEF11O15085 1522 aa40.52■■■■■ 4.08
SLC22A18-213ENST00000498244 WDR97A6NE52 1622 aa40.52■■■■■ 4.08
SLC22A18-213ENST00000498244 GRIN2BQ13224 1484 aa40.49■■■■■ 4.07
SLC22A18-213ENST00000498244 CYB5RLQ6IPT4 315 aa40.43■■■■■ 4.06
SLC22A18-213ENST00000498244 MAGI1Q96QZ7 1491 aaPredicted RBP40.41■■■■■ 4.06
SLC22A18-213ENST00000498244 GAPVD1Q14C86 1478 aa40.4■■■■■ 4.06
SLC22A18-213ENST00000498244 WRNQ14191 1432 aaPredicted RBP eCLIP40.35■■■■■ 4.05
SLC22A18-213ENST00000498244 ABCA10Q8WWZ4 1543 aa40.34■■■■■ 4.05
SLC22A18-213ENST00000498244 SYNJ2O15056 1496 aa40.29■■■■■ 4.04
SLC22A18-213ENST00000498244 SYNJ1O43426 1573 aa40.23■■■■■ 4.03
SLC22A18-213ENST00000498244 PBRM1Q86U86 1689 aa40.23■■■■■ 4.03
SLC22A18-213ENST00000498244 TOP2BQ02880 1626 aa40.21■■■■■ 4.03
SLC22A18-213ENST00000498244 ABCA5Q8WWZ7 1642 aa40.17■■■■■ 4.02
SLC22A18-213ENST00000498244 BIVM-ERCC5R4GMW8 1640 aa40.16■■■■■ 4.02
SLC22A18-213ENST00000498244 ARAP1Q96P48 1450 aa40.13■■■■■ 4.02
SLC22A18-213ENST00000498244 CLASP1Q7Z460 1538 aa40.12■■■■■ 4.01
SLC22A18-213ENST00000498244 TRHP20396 242 aaPredicted RBP39.97■■■■□ 3.99
SLC22A18-213ENST00000498244 GRIN2AQ12879 1464 aa39.94■■■■□ 3.98
SLC22A18-213ENST00000498244 FHAD1B1AJZ9 1412 aa39.91■■■■□ 3.98
SLC22A18-213ENST00000498244 ADAMTS12P58397 1594 aa39.89■■■■□ 3.98
SLC22A18-213ENST00000498244 ERICH3Q5RHP9 1530 aa39.84■■■■□ 3.97
SLC22A18-213ENST00000498244 NUP160Q12769 1436 aa39.74■■■■□ 3.95
SLC22A18-213ENST00000498244 CEP170Q5SW79 1584 aa39.73■■■■□ 3.95
SLC22A18-213ENST00000498244 ERCC6L2Q5T890 1561 aa39.59■■■■□ 3.93
SLC22A18-213ENST00000498244 KIF27Q86VH2 1401 aa39.58■■■■□ 3.93
SLC22A18-213ENST00000498244 JPH4Q96JJ6 628 aa39.54■■■■□ 3.92
SLC22A18-213ENST00000498244 IGF1RP08069 1367 aa39.5■■■■□ 3.91
SLC22A18-213ENST00000498244 PRG4Q92954 1404 aaPredicted RBP39.48■■■■□ 3.91
SLC22A18-213ENST00000498244 SHROOM2Q13796 1616 aa39.45■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms