RNA–Protein interactions for RNA: ENST00000498121.1

PCBP3-214, Transcript of poly(rC) binding protein 3, humanhuman

TSL 2

Gene PCBP3, Length 990 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-214ENST00000498121 NISCHQ9Y2I1 1504 aa37.37■■■■□ 3.57
PCBP3-214ENST00000498121 ABCC9O60706 1549 aa34.49■■■■□ 3.11
PCBP3-214ENST00000498121 CCDC180Q9P1Z9 1646 aa33.87■■■■□ 3.01
PCBP3-214ENST00000498121 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
PCBP3-214ENST00000498121 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
PCBP3-214ENST00000498121 NACADO15069 1562 aa32.07■■■□□ 2.72
PCBP3-214ENST00000498121 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
PCBP3-214ENST00000498121 PABPN1Q86U42 306 aaKnown RBP eCLIP31.95■■■□□ 2.71
PCBP3-214ENST00000498121 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
PCBP3-214ENST00000498121 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
PCBP3-214ENST00000498121 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
PCBP3-214ENST00000498121 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
PCBP3-214ENST00000498121 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
PCBP3-214ENST00000498121 SHROOM4Q9ULL8 1493 aa30.97■■■□□ 2.55
PCBP3-214ENST00000498121 EIF4G1Q04637 1599 aaKnown RBP30.9■■■□□ 2.54
PCBP3-214ENST00000498121 SCRIBQ14160 1630 aa30.9■■■□□ 2.54
PCBP3-214ENST00000498121 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
PCBP3-214ENST00000498121 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.51
PCBP3-214ENST00000498121 DNAJC5Q9H3Z4 198 aa30.53■■■□□ 2.48
PCBP3-214ENST00000498121 CUX2O14529 1486 aa29.87■■■□□ 2.37
PCBP3-214ENST00000498121 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
PCBP3-214ENST00000498121 NCAPD3P42695 1498 aa29.58■■■□□ 2.33
PCBP3-214ENST00000498121 NESP48681 1621 aa29.5■■■□□ 2.31
PCBP3-214ENST00000498121 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
PCBP3-214ENST00000498121 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
PCBP3-214ENST00000498121 SMARCA4P51532 1647 aa29.37■■■□□ 2.29
PCBP3-214ENST00000498121 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
PCBP3-214ENST00000498121 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
PCBP3-214ENST00000498121 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
PCBP3-214ENST00000498121 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
PCBP3-214ENST00000498121 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
PCBP3-214ENST00000498121 PEG3Q9GZU2 1588 aa29.02■■■□□ 2.24
PCBP3-214ENST00000498121 BAZ1AQ9NRL2 1556 aaPredicted RBP29.02■■■□□ 2.24
PCBP3-214ENST00000498121 TRIM41Q8WV44 630 aa29■■■□□ 2.23
PCBP3-214ENST00000498121 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
PCBP3-214ENST00000498121 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
PCBP3-214ENST00000498121 WDR62O43379 1518 aa28.72■■■□□ 2.19
PCBP3-214ENST00000498121 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
PCBP3-214ENST00000498121 CADPSQ9ULU8 1353 aa28.63■■■□□ 2.17
PCBP3-214ENST00000498121 WIZO95785 1651 aa28.55■■■□□ 2.16
PCBP3-214ENST00000498121 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
PCBP3-214ENST00000498121 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
PCBP3-214ENST00000498121 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
PCBP3-214ENST00000498121 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
PCBP3-214ENST00000498121 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
PCBP3-214ENST00000498121 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
PCBP3-214ENST00000498121 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
PCBP3-214ENST00000498121 CFTRP13569 1480 aa28.23■■■□□ 2.11
PCBP3-214ENST00000498121 PRDM2Q13029 1718 aa28.11■■■□□ 2.09
PCBP3-214ENST00000498121 ARHGEF11O15085 1522 aa28.05■■■□□ 2.08
PCBP3-214ENST00000498121 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
PCBP3-214ENST00000498121 ZNF608Q9ULD9 1512 aaPredicted RBP28.04■■■□□ 2.08
PCBP3-214ENST00000498121 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
PCBP3-214ENST00000498121 EIF4G3O43432 1585 aaKnown RBP27.89■■■□□ 2.05
PCBP3-214ENST00000498121 IFT140Q96RY7 1462 aa27.89■■■□□ 2.05
PCBP3-214ENST00000498121 CHD1O14646 1710 aa27.87■■■□□ 2.05
PCBP3-214ENST00000498121 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
PCBP3-214ENST00000498121 CYB5RLQ6IPT4 315 aa27.76■■■□□ 2.03
PCBP3-214ENST00000498121 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
PCBP3-214ENST00000498121 CCDC88BA6NC98 1476 aa27.71■■■□□ 2.03
PCBP3-214ENST00000498121 TARBP1Q13395 1621 aaKnown RBP27.68■■■□□ 2.02
PCBP3-214ENST00000498121 DNMBPQ6XZF7 1577 aa27.66■■■□□ 2.02
PCBP3-214ENST00000498121 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.02
PCBP3-214ENST00000498121 TRHP20396 242 aaPredicted RBP27.62■■■□□ 2.01
PCBP3-214ENST00000498121 ABCC8Q09428 1581 aa27.55■■■□□ 2
PCBP3-214ENST00000498121 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
PCBP3-214ENST00000498121 FBLN2P98095 1184 aa27.49■■□□□ 1.99
PCBP3-214ENST00000498121 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
PCBP3-214ENST00000498121 CLASP1Q7Z460 1538 aa27.43■■□□□ 1.98
PCBP3-214ENST00000498121 SNAPC4Q5SXM2 1469 aa27.37■■□□□ 1.97
PCBP3-214ENST00000498121 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
PCBP3-214ENST00000498121 SYNJ1O43426 1573 aa27.27■■□□□ 1.96
PCBP3-214ENST00000498121 SOGA1O94964 1423 aa27.26■■□□□ 1.95
PCBP3-214ENST00000498121 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
PCBP3-214ENST00000498121 AEBP2Q6ZN18 517 aaPredicted RBP27.23■■□□□ 1.95
PCBP3-214ENST00000498121 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
PCBP3-214ENST00000498121 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
PCBP3-214ENST00000498121 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
PCBP3-214ENST00000498121 CUX1P39880 1505 aa27.16■■□□□ 1.94
PCBP3-214ENST00000498121 CHMP7Q8WUX9 453 aaPredicted RBP27.13■■□□□ 1.93
PCBP3-214ENST00000498121 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
PCBP3-214ENST00000498121 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
PCBP3-214ENST00000498121 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
PCBP3-214ENST00000498121 ERCC6L2Q5T890 1561 aa27.05■■□□□ 1.92
PCBP3-214ENST00000498121 ABCA5Q8WWZ7 1642 aa26.98■■□□□ 1.91
PCBP3-214ENST00000498121 KIF13AQ9H1H9 1805 aa26.89■■□□□ 1.9
PCBP3-214ENST00000498121 CEP170Q5SW79 1584 aa26.85■■□□□ 1.89
PCBP3-214ENST00000498121 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
PCBP3-214ENST00000498121 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
PCBP3-214ENST00000498121 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
PCBP3-214ENST00000498121 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
PCBP3-214ENST00000498121 NUP160Q12769 1436 aa26.73■■□□□ 1.87
PCBP3-214ENST00000498121 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
PCBP3-214ENST00000498121 FHAD1B1AJZ9 1412 aa26.55■■□□□ 1.84
PCBP3-214ENST00000498121 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
PCBP3-214ENST00000498121 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
PCBP3-214ENST00000498121 PRG4Q92954 1404 aaPredicted RBP26.51■■□□□ 1.83
PCBP3-214ENST00000498121 DIP2BQ9P265 1576 aa26.49■■□□□ 1.83
PCBP3-214ENST00000498121 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
PCBP3-214ENST00000498121 RUSC2Q8N2Y8 1516 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms