RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
TRIM27-207ENST00000498117 ABCC9O60706 1549 aa29.68■■■□□ 2.34
TRIM27-207ENST00000498117 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
TRIM27-207ENST00000498117 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
TRIM27-207ENST00000498117 RB1CC1Q8TDY2 1594 aa28.01■■■□□ 2.07
TRIM27-207ENST00000498117 NACADO15069 1562 aa27.71■■■□□ 2.03
TRIM27-207ENST00000498117 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
TRIM27-207ENST00000498117 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
TRIM27-207ENST00000498117 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
TRIM27-207ENST00000498117 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
TRIM27-207ENST00000498117 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
TRIM27-207ENST00000498117 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
TRIM27-207ENST00000498117 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
TRIM27-207ENST00000498117 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
TRIM27-207ENST00000498117 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
TRIM27-207ENST00000498117 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
TRIM27-207ENST00000498117 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
TRIM27-207ENST00000498117 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
TRIM27-207ENST00000498117 DNAJC5Q9H3Z4 198 aa26.44■■□□□ 1.82
TRIM27-207ENST00000498117 CUX2O14529 1486 aa25.81■■□□□ 1.72
TRIM27-207ENST00000498117 ERCC6Q03468 1493 aa25.69■■□□□ 1.7
TRIM27-207ENST00000498117 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
TRIM27-207ENST00000498117 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
TRIM27-207ENST00000498117 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
TRIM27-207ENST00000498117 NESP48681 1621 aa25.33■■□□□ 1.65
TRIM27-207ENST00000498117 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
TRIM27-207ENST00000498117 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
TRIM27-207ENST00000498117 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
TRIM27-207ENST00000498117 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
TRIM27-207ENST00000498117 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
TRIM27-207ENST00000498117 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
TRIM27-207ENST00000498117 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
TRIM27-207ENST00000498117 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
TRIM27-207ENST00000498117 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
TRIM27-207ENST00000498117 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
TRIM27-207ENST00000498117 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
TRIM27-207ENST00000498117 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
TRIM27-207ENST00000498117 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
TRIM27-207ENST00000498117 WDR62O43379 1518 aa24.71■■□□□ 1.55
TRIM27-207ENST00000498117 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
TRIM27-207ENST00000498117 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
TRIM27-207ENST00000498117 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
TRIM27-207ENST00000498117 WIZO95785 1651 aa24.48■■□□□ 1.51
TRIM27-207ENST00000498117 CFTRP13569 1480 aa24.42■■□□□ 1.5
TRIM27-207ENST00000498117 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
TRIM27-207ENST00000498117 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
TRIM27-207ENST00000498117 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
TRIM27-207ENST00000498117 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
TRIM27-207ENST00000498117 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
TRIM27-207ENST00000498117 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
TRIM27-207ENST00000498117 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
TRIM27-207ENST00000498117 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
TRIM27-207ENST00000498117 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
TRIM27-207ENST00000498117 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
TRIM27-207ENST00000498117 PRDM2Q13029 1718 aa24■■□□□ 1.43
TRIM27-207ENST00000498117 TRHP20396 242 aaPredicted RBP23.98■■□□□ 1.43
TRIM27-207ENST00000498117 TOPBP1Q92547 1522 aa23.98■■□□□ 1.43
TRIM27-207ENST00000498117 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
TRIM27-207ENST00000498117 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
TRIM27-207ENST00000498117 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
TRIM27-207ENST00000498117 FBLN2P98095 1184 aa23.87■■□□□ 1.41
TRIM27-207ENST00000498117 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.411e-7■■■■■ 29.1
TRIM27-207ENST00000498117 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
TRIM27-207ENST00000498117 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
TRIM27-207ENST00000498117 CHD1O14646 1710 aa23.8■■□□□ 1.4
TRIM27-207ENST00000498117 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
TRIM27-207ENST00000498117 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
TRIM27-207ENST00000498117 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
TRIM27-207ENST00000498117 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
TRIM27-207ENST00000498117 SOGA1O94964 1423 aa23.65■■□□□ 1.38
TRIM27-207ENST00000498117 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
TRIM27-207ENST00000498117 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
TRIM27-207ENST00000498117 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
TRIM27-207ENST00000498117 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
TRIM27-207ENST00000498117 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
TRIM27-207ENST00000498117 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
TRIM27-207ENST00000498117 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
TRIM27-207ENST00000498117 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
TRIM27-207ENST00000498117 GRIN2BQ13224 1484 aa23.47■■□□□ 1.35
TRIM27-207ENST00000498117 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
TRIM27-207ENST00000498117 GAPVD1Q14C86 1478 aa23.4■■□□□ 1.34
TRIM27-207ENST00000498117 CUX1P39880 1505 aa23.36■■□□□ 1.33
TRIM27-207ENST00000498117 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
TRIM27-207ENST00000498117 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
TRIM27-207ENST00000498117 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
TRIM27-207ENST00000498117 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
TRIM27-207ENST00000498117 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.29
TRIM27-207ENST00000498117 NUP160Q12769 1436 aa23.1■■□□□ 1.29
TRIM27-207ENST00000498117 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
TRIM27-207ENST00000498117 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
TRIM27-207ENST00000498117 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
TRIM27-207ENST00000498117 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
TRIM27-207ENST00000498117 SHROOM2Q13796 1616 aa22.99■■□□□ 1.27
TRIM27-207ENST00000498117 JPH4Q96JJ6 628 aa22.95■■□□□ 1.26
TRIM27-207ENST00000498117 PRG4Q92954 1404 aaPredicted RBP22.93■■□□□ 1.26
TRIM27-207ENST00000498117 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
TRIM27-207ENST00000498117 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
TRIM27-207ENST00000498117 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
TRIM27-207ENST00000498117 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.26
TRIM27-207ENST00000498117 ABCC10Q5T3U5 1492 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms