RNA–Protein interactions for RNA: ENST00000498094.1

TNXB-207, Transcript of tenascin XB, humanhuman

TSL 5

Gene TNXB, Length 792 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-207ENST00000498094 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.44
TNXB-207ENST00000498094 ABCC9O60706 1549 aa33.83■■■■□ 3.01
TNXB-207ENST00000498094 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
TNXB-207ENST00000498094 DNAJC5BQ9UF47 199 aa32.33■■■□□ 2.77
TNXB-207ENST00000498094 RB1CC1Q8TDY2 1594 aa31.87■■■□□ 2.69
TNXB-207ENST00000498094 NACADO15069 1562 aa31.46■■■□□ 2.63
TNXB-207ENST00000498094 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.61
TNXB-207ENST00000498094 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
TNXB-207ENST00000498094 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
TNXB-207ENST00000498094 BICRAQ9NZM4 1560 aa31.03■■■□□ 2.56
TNXB-207ENST00000498094 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
TNXB-207ENST00000498094 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
TNXB-207ENST00000498094 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
TNXB-207ENST00000498094 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
TNXB-207ENST00000498094 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
TNXB-207ENST00000498094 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
TNXB-207ENST00000498094 ZCCHC6Q5VYS8 1495 aaKnown RBP30.17■■■□□ 2.42
TNXB-207ENST00000498094 DNAJC5Q9H3Z4 198 aa30.14■■■□□ 2.42
TNXB-207ENST00000498094 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
TNXB-207ENST00000498094 CUX2O14529 1486 aa29.39■■■□□ 2.3
TNXB-207ENST00000498094 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
TNXB-207ENST00000498094 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
TNXB-207ENST00000498094 NESP48681 1621 aa28.89■■■□□ 2.22
TNXB-207ENST00000498094 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
TNXB-207ENST00000498094 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
TNXB-207ENST00000498094 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
TNXB-207ENST00000498094 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
TNXB-207ENST00000498094 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
TNXB-207ENST00000498094 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
TNXB-207ENST00000498094 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
TNXB-207ENST00000498094 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
TNXB-207ENST00000498094 LAMC3Q9Y6N6 1575 aa28.53■■■□□ 2.16
TNXB-207ENST00000498094 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
TNXB-207ENST00000498094 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
TNXB-207ENST00000498094 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
TNXB-207ENST00000498094 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
TNXB-207ENST00000498094 MRC2Q9UBG0 1479 aa28.18■■■□□ 2.1
TNXB-207ENST00000498094 WDR62O43379 1518 aa28.16■■■□□ 2.1
TNXB-207ENST00000498094 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
TNXB-207ENST00000498094 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
TNXB-207ENST00000498094 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
TNXB-207ENST00000498094 WIZO95785 1651 aa27.87■■■□□ 2.05
TNXB-207ENST00000498094 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
TNXB-207ENST00000498094 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
TNXB-207ENST00000498094 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
TNXB-207ENST00000498094 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
TNXB-207ENST00000498094 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
TNXB-207ENST00000498094 CFTRP13569 1480 aa27.66■■■□□ 2.02
TNXB-207ENST00000498094 ARHGEF11O15085 1522 aa27.53■■■□□ 2
TNXB-207ENST00000498094 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
TNXB-207ENST00000498094 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
TNXB-207ENST00000498094 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
TNXB-207ENST00000498094 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
TNXB-207ENST00000498094 RSF1Q96T23 1441 aaPredicted RBP27.32■■□□□ 1.96
TNXB-207ENST00000498094 CYB5RLQ6IPT4 315 aa27.31■■□□□ 1.96
TNXB-207ENST00000498094 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
TNXB-207ENST00000498094 CHD1O14646 1710 aa27.27■■□□□ 1.96
TNXB-207ENST00000498094 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
TNXB-207ENST00000498094 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
TNXB-207ENST00000498094 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
TNXB-207ENST00000498094 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
TNXB-207ENST00000498094 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.93
TNXB-207ENST00000498094 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
TNXB-207ENST00000498094 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
TNXB-207ENST00000498094 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
TNXB-207ENST00000498094 FBLN2P98095 1184 aa27.01■■□□□ 1.91
TNXB-207ENST00000498094 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
TNXB-207ENST00000498094 POLA1P09884 1462 aaPredicted RBP26.92■■□□□ 1.9
TNXB-207ENST00000498094 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
TNXB-207ENST00000498094 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
TNXB-207ENST00000498094 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
TNXB-207ENST00000498094 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
TNXB-207ENST00000498094 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
TNXB-207ENST00000498094 SOGA1O94964 1423 aa26.73■■□□□ 1.87
TNXB-207ENST00000498094 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
TNXB-207ENST00000498094 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
TNXB-207ENST00000498094 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
TNXB-207ENST00000498094 FGD5Q6ZNL6 1462 aa26.66■■□□□ 1.86
TNXB-207ENST00000498094 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
TNXB-207ENST00000498094 GRIN2BQ13224 1484 aa26.6■■□□□ 1.85
TNXB-207ENST00000498094 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
TNXB-207ENST00000498094 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
TNXB-207ENST00000498094 CUX1P39880 1505 aa26.54■■□□□ 1.84
TNXB-207ENST00000498094 ERCC6L2Q5T890 1561 aa26.45■■□□□ 1.82
TNXB-207ENST00000498094 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
TNXB-207ENST00000498094 KIF13AQ9H1H9 1805 aa26.33■■□□□ 1.81
TNXB-207ENST00000498094 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
TNXB-207ENST00000498094 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
TNXB-207ENST00000498094 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
TNXB-207ENST00000498094 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
TNXB-207ENST00000498094 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
TNXB-207ENST00000498094 NUP160Q12769 1436 aa26.21■■□□□ 1.79
TNXB-207ENST00000498094 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
TNXB-207ENST00000498094 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
TNXB-207ENST00000498094 PRG4Q92954 1404 aaPredicted RBP26■■□□□ 1.75
TNXB-207ENST00000498094 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
TNXB-207ENST00000498094 DIP2BQ9P265 1576 aa25.96■■□□□ 1.75
TNXB-207ENST00000498094 FAM69CQ0P6D2 419 aa25.96■■□□□ 1.75
TNXB-207ENST00000498094 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
TNXB-207ENST00000498094 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms