RNA–Protein interactions for RNA: ENST00000498037.1

ALK-204, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 4

Gene ALK, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-204ENST00000498037 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
ALK-204ENST00000498037 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
ALK-204ENST00000498037 ABCC9O60706 1549 aa24.11■■□□□ 1.45
ALK-204ENST00000498037 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
ALK-204ENST00000498037 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
ALK-204ENST00000498037 NACADO15069 1562 aa23.04■■□□□ 1.28
ALK-204ENST00000498037 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
ALK-204ENST00000498037 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
ALK-204ENST00000498037 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
ALK-204ENST00000498037 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
ALK-204ENST00000498037 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
ALK-204ENST00000498037 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
ALK-204ENST00000498037 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
ALK-204ENST00000498037 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
ALK-204ENST00000498037 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
ALK-204ENST00000498037 EIF4G1Q04637 1599 aaKnown RBP21.83■■□□□ 1.09
ALK-204ENST00000498037 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
ALK-204ENST00000498037 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
ALK-204ENST00000498037 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
ALK-204ENST00000498037 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
ALK-204ENST00000498037 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
ALK-204ENST00000498037 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
ALK-204ENST00000498037 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
ALK-204ENST00000498037 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
ALK-204ENST00000498037 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
ALK-204ENST00000498037 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
ALK-204ENST00000498037 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
ALK-204ENST00000498037 WIZO95785 1651 aa21.07■□□□□ 0.96
ALK-204ENST00000498037 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
ALK-204ENST00000498037 NESP48681 1621 aa20.83■□□□□ 0.93
ALK-204ENST00000498037 ERCC6Q03468 1493 aa20.81■□□□□ 0.92
ALK-204ENST00000498037 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
ALK-204ENST00000498037 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
ALK-204ENST00000498037 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
ALK-204ENST00000498037 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
ALK-204ENST00000498037 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
ALK-204ENST00000498037 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
ALK-204ENST00000498037 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
ALK-204ENST00000498037 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
ALK-204ENST00000498037 CUX2O14529 1486 aa20.5■□□□□ 0.87
ALK-204ENST00000498037 CFTRP13569 1480 aa20.49■□□□□ 0.87
ALK-204ENST00000498037 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
ALK-204ENST00000498037 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
ALK-204ENST00000498037 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
ALK-204ENST00000498037 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
ALK-204ENST00000498037 WDR62O43379 1518 aa20.32■□□□□ 0.84
ALK-204ENST00000498037 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
ALK-204ENST00000498037 TOPBP1Q92547 1522 aa20.11■□□□□ 0.81
ALK-204ENST00000498037 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
ALK-204ENST00000498037 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
ALK-204ENST00000498037 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
ALK-204ENST00000498037 CUX1P39880 1505 aa19.94■□□□□ 0.78
ALK-204ENST00000498037 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
ALK-204ENST00000498037 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
ALK-204ENST00000498037 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
ALK-204ENST00000498037 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
ALK-204ENST00000498037 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
ALK-204ENST00000498037 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
ALK-204ENST00000498037 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
ALK-204ENST00000498037 SOGA1O94964 1423 aa19.85■□□□□ 0.77
ALK-204ENST00000498037 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
ALK-204ENST00000498037 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
ALK-204ENST00000498037 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
ALK-204ENST00000498037 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
ALK-204ENST00000498037 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
ALK-204ENST00000498037 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
ALK-204ENST00000498037 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
ALK-204ENST00000498037 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
ALK-204ENST00000498037 CHD1O14646 1710 aa19.67■□□□□ 0.74
ALK-204ENST00000498037 FBLN2P98095 1184 aa19.65■□□□□ 0.74
ALK-204ENST00000498037 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
ALK-204ENST00000498037 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
ALK-204ENST00000498037 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
ALK-204ENST00000498037 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
ALK-204ENST00000498037 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
ALK-204ENST00000498037 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
ALK-204ENST00000498037 MAGI1Q96QZ7 1491 aaPredicted RBP19.56■□□□□ 0.72
ALK-204ENST00000498037 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
ALK-204ENST00000498037 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
ALK-204ENST00000498037 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
ALK-204ENST00000498037 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
ALK-204ENST00000498037 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
ALK-204ENST00000498037 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
ALK-204ENST00000498037 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
ALK-204ENST00000498037 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
ALK-204ENST00000498037 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
ALK-204ENST00000498037 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
ALK-204ENST00000498037 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
ALK-204ENST00000498037 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
ALK-204ENST00000498037 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
ALK-204ENST00000498037 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
ALK-204ENST00000498037 CUL7Q14999 1698 aa19.3■□□□□ 0.68
ALK-204ENST00000498037 IGF1RP08069 1367 aa19.25■□□□□ 0.67
ALK-204ENST00000498037 NUP160Q12769 1436 aa19.24■□□□□ 0.67
ALK-204ENST00000498037 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
ALK-204ENST00000498037 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
ALK-204ENST00000498037 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
ALK-204ENST00000498037 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
ALK-204ENST00000498037 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
ALK-204ENST00000498037 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms