RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 NISCHQ9Y2I1 1504 aa59.85■■■■■ 7.17
STX1A-214ENST00000497980 CCDC180Q9P1Z9 1646 aa53.44■■■■■ 6.15
STX1A-214ENST00000497980 ABCC9O60706 1549 aa52.56■■■■■ 6.01
STX1A-214ENST00000497980 RB1CC1Q8TDY2 1594 aa50.51■■■■■ 5.68
STX1A-214ENST00000497980 NACADO15069 1562 aa50.37■■■■■ 5.65
STX1A-214ENST00000497980 DCAF8L2P0C7V8 631 aa50.05■■■■■ 5.6
STX1A-214ENST00000497980 MYO15BQ96JP2 1530 aa50.01■■■■■ 5.6
STX1A-214ENST00000497980 ZCCHC6Q5VYS8 1495 aaKnown RBP49.81■■■■■ 5.56
STX1A-214ENST00000497980 DCAF1Q9Y4B6 1507 aa49.6■■■■■ 5.53
STX1A-214ENST00000497980 UNC13AQ9UPW8 1703 aa49.14■■■■■ 5.46
STX1A-214ENST00000497980 PABPN1Q86U42 306 aaKnown RBP eCLIP49■■■■■ 5.43
STX1A-214ENST00000497980 BICRAQ9NZM4 1560 aa48.86■■■■■ 5.41
STX1A-214ENST00000497980 SCRIBQ14160 1630 aa48.62■■■■■ 5.37
STX1A-214ENST00000497980 SHROOM4Q9ULL8 1493 aa48.61■■■■■ 5.37
STX1A-214ENST00000497980 DNAJC5BQ9UF47 199 aa48.48■■■■■ 5.35
STX1A-214ENST00000497980 EIF4G1Q04637 1599 aaKnown RBP47.68■■■■■ 5.22
STX1A-214ENST00000497980 CC2D2AQ9P2K1 1620 aa47.55■■■■■ 5.2
STX1A-214ENST00000497980 CECR2Q9BXF3 1484 aa47.35■■■■■ 5.17
STX1A-214ENST00000497980 SMARCA4P51532 1647 aa46.51■■■■■ 5.04
STX1A-214ENST00000497980 BAZ1AQ9NRL2 1556 aaPredicted RBP46.48■■■■■ 5.03
STX1A-214ENST00000497980 NCAPD3P42695 1498 aa46.45■■■■■ 5.03
STX1A-214ENST00000497980 ATAD2BQ9ULI0 1458 aa46.38■■■■■ 5.02
STX1A-214ENST00000497980 SMARCA2P51531 1590 aa46.38■■■■■ 5.01
STX1A-214ENST00000497980 HMGXB3Q12766 1538 aa46.23■■■■■ 4.99
STX1A-214ENST00000497980 PEG3Q9GZU2 1588 aa46.13■■■■■ 4.98
STX1A-214ENST00000497980 MROH2BQ7Z745 1585 aa46.05■■■■■ 4.96
STX1A-214ENST00000497980 BAZ1BQ9UIG0 1483 aaKnown RBP46.02■■■■■ 4.96
STX1A-214ENST00000497980 WIZO95785 1651 aa45.49■■■■■ 4.87
STX1A-214ENST00000497980 ERCC6Q03468 1493 aa45.46■■■■■ 4.87
STX1A-214ENST00000497980 RSF1Q96T23 1441 aaPredicted RBP45.42■■■■■ 4.86
STX1A-214ENST00000497980 NESP48681 1621 aa45.32■■■■■ 4.85
STX1A-214ENST00000497980 LAMC3Q9Y6N6 1575 aa45.31■■■■■ 4.84
STX1A-214ENST00000497980 CUX2O14529 1486 aa45.17■■■■■ 4.82
STX1A-214ENST00000497980 TOP2AP11388 1531 aaKnown RBP45.12■■■■■ 4.81
STX1A-214ENST00000497980 CADPSQ9ULU8 1353 aa45.07■■■■■ 4.81
STX1A-214ENST00000497980 PDS5BQ9NTI5 1447 aa45.06■■■■■ 4.8
STX1A-214ENST00000497980 THOC2Q8NI27 1593 aaKnown RBP44.81■■■■■ 4.76
STX1A-214ENST00000497980 KIF21AQ7Z4S6 1674 aa44.77■■■■■ 4.76
STX1A-214ENST00000497980 CFTRP13569 1480 aa44.72■■■■■ 4.75
STX1A-214ENST00000497980 MRC2Q9UBG0 1479 aa44.58■■■■■ 4.73
STX1A-214ENST00000497980 CEP164Q9UPV0 1460 aa44.56■■■■■ 4.72
STX1A-214ENST00000497980 FANCD2Q9BXW9 1451 aa44.54■■■■■ 4.72
STX1A-214ENST00000497980 CCDC88BA6NC98 1476 aa44.52■■■■■ 4.72
STX1A-214ENST00000497980 WDR62O43379 1518 aa44.44■■■■■ 4.7
STX1A-214ENST00000497980 PRDM2Q13029 1718 aa44.28■■■■■ 4.68
STX1A-214ENST00000497980 DNAJC5Q9H3Z4 198 aa44.14■■■■■ 4.66
STX1A-214ENST00000497980 URB2Q14146 1524 aaKnown RBP44.07■■■■■ 4.65
STX1A-214ENST00000497980 SUPT5HO00267 1087 aaKnown RBP43.87■■■■■ 4.61
STX1A-214ENST00000497980 ABCC8Q09428 1581 aa43.85■■■■■ 4.61
STX1A-214ENST00000497980 TOPBP1Q92547 1522 aa43.77■■■■■ 4.6
STX1A-214ENST00000497980 DNMBPQ6XZF7 1577 aa43.71■■■■■ 4.59
STX1A-214ENST00000497980 IFT140Q96RY7 1462 aa43.66■■■■■ 4.58
STX1A-214ENST00000497980 POLA1P09884 1462 aaPredicted RBP43.38■■■■■ 4.53
STX1A-214ENST00000497980 ZNF608Q9ULD9 1512 aaPredicted RBP43.37■■■■■ 4.53
STX1A-214ENST00000497980 TARBP1Q13395 1621 aaKnown RBP43.28■■■■■ 4.52
STX1A-214ENST00000497980 CUX1P39880 1505 aa43.25■■■■■ 4.51
STX1A-214ENST00000497980 EIF4G3O43432 1585 aaKnown RBP43.24■■■■■ 4.51
STX1A-214ENST00000497980 FGD5Q6ZNL6 1462 aa43.2■■■■■ 4.51
STX1A-214ENST00000497980 SOGA1O94964 1423 aa43.18■■■■■ 4.5
STX1A-214ENST00000497980 OSCARQ8IYS5 282 aa43.15■■■■■ 4.5
STX1A-214ENST00000497980 RAD54L2Q9Y4B4 1467 aa43.11■■■■■ 4.49
STX1A-214ENST00000497980 WDR97A6NE52 1622 aa43.1■■■■■ 4.49
STX1A-214ENST00000497980 AQRO60306 1485 aaKnown RBP eCLIP43.07■■■■■ 4.49
STX1A-214ENST00000497980 TDRD9Q8NDG6 1382 aaKnown RBP42.93■■■■■ 4.46
STX1A-214ENST00000497980 WRNQ14191 1432 aaPredicted RBP eCLIP42.89■■■■■ 4.46
STX1A-214ENST00000497980 TOP2BQ02880 1626 aa42.82■■■■■ 4.44
STX1A-214ENST00000497980 ABCA10Q8WWZ4 1543 aa42.81■■■■■ 4.44
STX1A-214ENST00000497980 BIVM-ERCC5R4GMW8 1640 aa42.79■■■■■ 4.44
STX1A-214ENST00000497980 GRIN2BQ13224 1484 aa42.79■■■■■ 4.44
STX1A-214ENST00000497980 MAGI1Q96QZ7 1491 aaPredicted RBP42.75■■■■■ 4.43
STX1A-214ENST00000497980 SNAPC4Q5SXM2 1469 aa42.74■■■■■ 4.43
STX1A-214ENST00000497980 SYNJ1O43426 1573 aa42.72■■■■■ 4.43
STX1A-214ENST00000497980 GAPVD1Q14C86 1478 aa42.7■■■■■ 4.43
STX1A-214ENST00000497980 CHD1O14646 1710 aa42.68■■■■■ 4.42
STX1A-214ENST00000497980 FBLN2P98095 1184 aa42.66■■■■■ 4.42
STX1A-214ENST00000497980 ABCA5Q8WWZ7 1642 aa42.64■■■■■ 4.42
STX1A-214ENST00000497980 PBRM1Q86U86 1689 aa42.56■■■■■ 4.4
STX1A-214ENST00000497980 SYNJ2O15056 1496 aa42.55■■■■■ 4.4
STX1A-214ENST00000497980 CHMP7Q8WUX9 453 aaPredicted RBP42.54■■■■■ 4.4
STX1A-214ENST00000497980 TRIM41Q8WV44 630 aa42.45■■■■■ 4.39
STX1A-214ENST00000497980 ARHGEF11O15085 1522 aa42.45■■■■■ 4.39
STX1A-214ENST00000497980 RIMBP3CA6NJZ7 1639 aa42.43■■■■■ 4.38
STX1A-214ENST00000497980 RIMBP3BA6NNM3 1639 aa42.43■■■■■ 4.38
STX1A-214ENST00000497980 RIMBP3Q9UFD9 1639 aa42.43■■■■■ 4.38
STX1A-214ENST00000497980 ERICH3Q5RHP9 1530 aa42.32■■■■■ 4.37
STX1A-214ENST00000497980 CLASP1Q7Z460 1538 aa42.31■■■■■ 4.36
STX1A-214ENST00000497980 ADAMTS12P58397 1594 aa42.27■■■■■ 4.36
STX1A-214ENST00000497980 FHAD1B1AJZ9 1412 aa42.23■■■■■ 4.35
STX1A-214ENST00000497980 GRIN2AQ12879 1464 aa42.21■■■■■ 4.35
STX1A-214ENST00000497980 NUP160Q12769 1436 aa42.06■■■■■ 4.32
STX1A-214ENST00000497980 KIF27Q86VH2 1401 aa42.06■■■■■ 4.32
STX1A-214ENST00000497980 ARAP1Q96P48 1450 aa42.05■■■■■ 4.32
STX1A-214ENST00000497980 CYB5RLQ6IPT4 315 aa42■■■■■ 4.31
STX1A-214ENST00000497980 CEP170Q5SW79 1584 aa41.95■■■■■ 4.31
STX1A-214ENST00000497980 IGF1RP08069 1367 aa41.85■■■■■ 4.29
STX1A-214ENST00000497980 CUL7Q14999 1698 aa41.84■■■■■ 4.29
STX1A-214ENST00000497980 SHROOM2Q13796 1616 aa41.74■■■■■ 4.27
STX1A-214ENST00000497980 RUSC2Q8N2Y8 1516 aa41.66■■■■■ 4.26
STX1A-214ENST00000497980 CARMIL1Q5VZK9 1371 aa41.63■■■■■ 4.26
STX1A-214ENST00000497980 ERCC6L2Q5T890 1561 aa41.57■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms