RNA–Protein interactions for RNA: ENST00000497895.5

KRBA1-208, Transcript of KRAB-A domain containing 1, humanhuman

TSL 3

Gene KRBA1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-208ENST00000497895 NISCHQ9Y2I1 1504 aa46.49■■■■■ 5.03
KRBA1-208ENST00000497895 CCDC180Q9P1Z9 1646 aa41.36■■■■■ 4.21
KRBA1-208ENST00000497895 ABCC9O60706 1549 aa40.78■■■■■ 4.12
KRBA1-208ENST00000497895 RB1CC1Q8TDY2 1594 aa39.08■■■■□ 3.85
KRBA1-208ENST00000497895 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
KRBA1-208ENST00000497895 NACADO15069 1562 aa38.98■■■■□ 3.83
KRBA1-208ENST00000497895 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
KRBA1-208ENST00000497895 MYO15BQ96JP2 1530 aa38.66■■■■□ 3.78
KRBA1-208ENST00000497895 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
KRBA1-208ENST00000497895 UNC13AQ9UPW8 1703 aa38.1■■■■□ 3.69
KRBA1-208ENST00000497895 PABPN1Q86U42 306 aaKnown RBP eCLIP38.1■■■■□ 3.69
KRBA1-208ENST00000497895 BICRAQ9NZM4 1560 aa37.89■■■■□ 3.66
KRBA1-208ENST00000497895 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
KRBA1-208ENST00000497895 DNAJC5BQ9UF47 199 aa37.62■■■■□ 3.61
KRBA1-208ENST00000497895 SHROOM4Q9ULL8 1493 aa37.48■■■■□ 3.59
KRBA1-208ENST00000497895 EIF4G1Q04637 1599 aaKnown RBP36.93■■■■□ 3.5
KRBA1-208ENST00000497895 CC2D2AQ9P2K1 1620 aa36.83■■■■□ 3.49
KRBA1-208ENST00000497895 CECR2Q9BXF3 1484 aa36.66■■■■□ 3.46
KRBA1-208ENST00000497895 SMARCA4P51532 1647 aa36.1■■■■□ 3.37
KRBA1-208ENST00000497895 BAZ1AQ9NRL2 1556 aaPredicted RBP36.04■■■■□ 3.36
KRBA1-208ENST00000497895 NCAPD3P42695 1498 aa35.99■■■■□ 3.35
KRBA1-208ENST00000497895 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
KRBA1-208ENST00000497895 SMARCA2P51531 1590 aa35.92■■■■□ 3.34
KRBA1-208ENST00000497895 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
KRBA1-208ENST00000497895 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
KRBA1-208ENST00000497895 PEG3Q9GZU2 1588 aa35.73■■■■□ 3.31
KRBA1-208ENST00000497895 BAZ1BQ9UIG0 1483 aaKnown RBP35.69■■■■□ 3.3
KRBA1-208ENST00000497895 WIZO95785 1651 aa35.4■■■■□ 3.26
KRBA1-208ENST00000497895 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
KRBA1-208ENST00000497895 NESP48681 1621 aa35.21■■■■□ 3.23
KRBA1-208ENST00000497895 ERCC6Q03468 1493 aa35.18■■■■□ 3.22
KRBA1-208ENST00000497895 LAMC3Q9Y6N6 1575 aa35.05■■■■□ 3.2
KRBA1-208ENST00000497895 TOP2AP11388 1531 aaKnown RBP35.04■■■■□ 3.2
KRBA1-208ENST00000497895 CADPSQ9ULU8 1353 aa34.95■■■■□ 3.19
KRBA1-208ENST00000497895 PDS5BQ9NTI5 1447 aa34.87■■■■□ 3.17
KRBA1-208ENST00000497895 CUX2O14529 1486 aa34.84■■■■□ 3.17
KRBA1-208ENST00000497895 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
KRBA1-208ENST00000497895 THOC2Q8NI27 1593 aaKnown RBP34.69■■■■□ 3.14
KRBA1-208ENST00000497895 CFTRP13569 1480 aa34.68■■■■□ 3.14
KRBA1-208ENST00000497895 CCDC88BA6NC98 1476 aa34.65■■■■□ 3.14
KRBA1-208ENST00000497895 FANCD2Q9BXW9 1451 aa34.55■■■■□ 3.12
KRBA1-208ENST00000497895 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
KRBA1-208ENST00000497895 CEP164Q9UPV0 1460 aa34.52■■■■□ 3.12
KRBA1-208ENST00000497895 WDR62O43379 1518 aa34.4■■■■□ 3.1
KRBA1-208ENST00000497895 SUPT5HO00267 1087 aaKnown RBP34.35■■■■□ 3.09
KRBA1-208ENST00000497895 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
KRBA1-208ENST00000497895 URB2Q14146 1524 aaKnown RBP34.21■■■■□ 3.07
KRBA1-208ENST00000497895 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
KRBA1-208ENST00000497895 TOPBP1Q92547 1522 aa33.96■■■■□ 3.03
KRBA1-208ENST00000497895 ABCC8Q09428 1581 aa33.93■■■■□ 3.02
KRBA1-208ENST00000497895 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
KRBA1-208ENST00000497895 IFT140Q96RY7 1462 aa33.81■■■■□ 3
KRBA1-208ENST00000497895 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
KRBA1-208ENST00000497895 POLA1P09884 1462 aaPredicted RBP33.67■■■□□ 2.98
KRBA1-208ENST00000497895 CUX1P39880 1505 aa33.63■■■□□ 2.97
KRBA1-208ENST00000497895 TARBP1Q13395 1621 aaKnown RBP33.57■■■□□ 2.97
KRBA1-208ENST00000497895 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
KRBA1-208ENST00000497895 RAD54L2Q9Y4B4 1467 aa33.54■■■□□ 2.96
KRBA1-208ENST00000497895 SOGA1O94964 1423 aa33.53■■■□□ 2.96
KRBA1-208ENST00000497895 EIF4G3O43432 1585 aaKnown RBP33.51■■■□□ 2.96
KRBA1-208ENST00000497895 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.95
KRBA1-208ENST00000497895 TDRD9Q8NDG6 1382 aaKnown RBP33.39■■■□□ 2.94
KRBA1-208ENST00000497895 OSCARQ8IYS5 282 aa33.39■■■□□ 2.94
KRBA1-208ENST00000497895 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.93
KRBA1-208ENST00000497895 WDR97A6NE52 1622 aa33.28■■■□□ 2.92
KRBA1-208ENST00000497895 TOP2BQ02880 1626 aa33.26■■■□□ 2.91
KRBA1-208ENST00000497895 SYNJ1O43426 1573 aa33.26■■■□□ 2.91
KRBA1-208ENST00000497895 BIVM-ERCC5R4GMW8 1640 aa33.24■■■□□ 2.91
KRBA1-208ENST00000497895 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
KRBA1-208ENST00000497895 GRIN2BQ13224 1484 aa33.17■■■□□ 2.9
KRBA1-208ENST00000497895 SNAPC4Q5SXM2 1469 aa33.17■■■□□ 2.9
KRBA1-208ENST00000497895 FBLN2P98095 1184 aa33.16■■■□□ 2.9
KRBA1-208ENST00000497895 GAPVD1Q14C86 1478 aa33.14■■■□□ 2.9
KRBA1-208ENST00000497895 CHD1O14646 1710 aa33.09■■■□□ 2.89
KRBA1-208ENST00000497895 MAGI1Q96QZ7 1491 aaPredicted RBP33.09■■■□□ 2.89
KRBA1-208ENST00000497895 ABCA5Q8WWZ7 1642 aa33.07■■■□□ 2.88
KRBA1-208ENST00000497895 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
KRBA1-208ENST00000497895 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.87
KRBA1-208ENST00000497895 SYNJ2O15056 1496 aa32.97■■■□□ 2.87
KRBA1-208ENST00000497895 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
KRBA1-208ENST00000497895 RIMBP3CA6NJZ7 1639 aa32.84■■■□□ 2.85
KRBA1-208ENST00000497895 RIMBP3BA6NNM3 1639 aa32.84■■■□□ 2.85
KRBA1-208ENST00000497895 RIMBP3Q9UFD9 1639 aa32.84■■■□□ 2.85
KRBA1-208ENST00000497895 ARHGEF11O15085 1522 aa32.83■■■□□ 2.85
KRBA1-208ENST00000497895 ERICH3Q5RHP9 1530 aa32.8■■■□□ 2.84
KRBA1-208ENST00000497895 ADAMTS12P58397 1594 aa32.79■■■□□ 2.84
KRBA1-208ENST00000497895 CLASP1Q7Z460 1538 aa32.77■■■□□ 2.84
KRBA1-208ENST00000497895 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
KRBA1-208ENST00000497895 GRIN2AQ12879 1464 aa32.74■■■□□ 2.83
KRBA1-208ENST00000497895 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
KRBA1-208ENST00000497895 NUP160Q12769 1436 aa32.6■■■□□ 2.81
KRBA1-208ENST00000497895 CYB5RLQ6IPT4 315 aa32.58■■■□□ 2.81
KRBA1-208ENST00000497895 CEP170Q5SW79 1584 aa32.57■■■□□ 2.8
KRBA1-208ENST00000497895 ARAP1Q96P48 1450 aa32.56■■■□□ 2.8
KRBA1-208ENST00000497895 IGF1RP08069 1367 aa32.56■■■□□ 2.8
KRBA1-208ENST00000497895 CUL7Q14999 1698 aa32.44■■■□□ 2.78
KRBA1-208ENST00000497895 CARMIL1Q5VZK9 1371 aa32.37■■■□□ 2.77
KRBA1-208ENST00000497895 SHROOM2Q13796 1616 aa32.33■■■□□ 2.77
KRBA1-208ENST00000497895 ERCC6L2Q5T890 1561 aa32.32■■■□□ 2.76
KRBA1-208ENST00000497895 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms