RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-209ENST00000497816 NISCHQ9Y2I1 1504 aa36.22■■■■□ 3.39
IVD-209ENST00000497816 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
IVD-209ENST00000497816 ABCC9O60706 1549 aa31.91■■■□□ 2.7
IVD-209ENST00000497816 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
IVD-209ENST00000497816 NACADO15069 1562 aa30.48■■■□□ 2.47
IVD-209ENST00000497816 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
IVD-209ENST00000497816 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.43
IVD-209ENST00000497816 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
IVD-209ENST00000497816 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
IVD-209ENST00000497816 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
IVD-209ENST00000497816 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
IVD-209ENST00000497816 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
IVD-209ENST00000497816 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
IVD-209ENST00000497816 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
IVD-209ENST00000497816 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
IVD-209ENST00000497816 EIF4G1Q04637 1599 aaKnown RBP28.93■■■□□ 2.22
IVD-209ENST00000497816 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
IVD-209ENST00000497816 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
IVD-209ENST00000497816 SMARCA4P51532 1647 aa28.2■■■□□ 2.11
IVD-209ENST00000497816 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
IVD-209ENST00000497816 BAZ1AQ9NRL2 1556 aaPredicted RBP28.09■■■□□ 2.09
IVD-209ENST00000497816 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
IVD-209ENST00000497816 SMARCA2P51531 1590 aa28.04■■■□□ 2.08
IVD-209ENST00000497816 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
IVD-209ENST00000497816 PEG3Q9GZU2 1588 aa27.93■■■□□ 2.06
IVD-209ENST00000497816 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
IVD-209ENST00000497816 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
IVD-209ENST00000497816 WIZO95785 1651 aa27.63■■■□□ 2.01
IVD-209ENST00000497816 NESP48681 1621 aa27.55■■■□□ 2
IVD-209ENST00000497816 ERCC6Q03468 1493 aa27.51■■□□□ 1.99
IVD-209ENST00000497816 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
IVD-209ENST00000497816 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
IVD-209ENST00000497816 CUX2O14529 1486 aa27.36■■□□□ 1.97
IVD-209ENST00000497816 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
IVD-209ENST00000497816 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
IVD-209ENST00000497816 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
IVD-209ENST00000497816 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
IVD-209ENST00000497816 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
IVD-209ENST00000497816 CFTRP13569 1480 aa27.04■■□□□ 1.92
IVD-209ENST00000497816 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
IVD-209ENST00000497816 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
IVD-209ENST00000497816 FANCD2Q9BXW9 1451 aa26.95■■□□□ 1.9
IVD-209ENST00000497816 CEP164Q9UPV0 1460 aa26.95■■□□□ 1.9
IVD-209ENST00000497816 WDR62O43379 1518 aa26.94■■□□□ 1.9
IVD-209ENST00000497816 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
IVD-209ENST00000497816 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
IVD-209ENST00000497816 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
IVD-209ENST00000497816 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
IVD-209ENST00000497816 DNMBPQ6XZF7 1577 aa26.47■■□□□ 1.83
IVD-209ENST00000497816 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
IVD-209ENST00000497816 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
IVD-209ENST00000497816 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
IVD-209ENST00000497816 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
IVD-209ENST00000497816 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
IVD-209ENST00000497816 POLA1P09884 1462 aaPredicted RBP26.26■■□□□ 1.79
IVD-209ENST00000497816 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
IVD-209ENST00000497816 CUX1P39880 1505 aa26.21■■□□□ 1.79
IVD-209ENST00000497816 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
IVD-209ENST00000497816 RAD54L2Q9Y4B4 1467 aa26.13■■□□□ 1.77
IVD-209ENST00000497816 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.775e-7■■■■■ 27.6
IVD-209ENST00000497816 SOGA1O94964 1423 aa26.1■■□□□ 1.77
IVD-209ENST00000497816 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
IVD-209ENST00000497816 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
IVD-209ENST00000497816 CHD1O14646 1710 aa26.02■■□□□ 1.76
IVD-209ENST00000497816 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
IVD-209ENST00000497816 BIVM-ERCC5R4GMW8 1640 aa25.94■■□□□ 1.74
IVD-209ENST00000497816 TOP2BQ02880 1626 aa25.91■■□□□ 1.74
IVD-209ENST00000497816 SYNJ1O43426 1573 aa25.89■■□□□ 1.74
IVD-209ENST00000497816 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
IVD-209ENST00000497816 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
IVD-209ENST00000497816 SNAPC4Q5SXM2 1469 aa25.88■■□□□ 1.73
IVD-209ENST00000497816 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
IVD-209ENST00000497816 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
IVD-209ENST00000497816 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
IVD-209ENST00000497816 RIMBP3CA6NJZ7 1639 aa25.84■■□□□ 1.73
IVD-209ENST00000497816 RIMBP3BA6NNM3 1639 aa25.84■■□□□ 1.73
IVD-209ENST00000497816 RIMBP3Q9UFD9 1639 aa25.84■■□□□ 1.73
IVD-209ENST00000497816 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
IVD-209ENST00000497816 GAPVD1Q14C86 1478 aa25.81■■□□□ 1.72
IVD-209ENST00000497816 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
IVD-209ENST00000497816 FBLN2P98095 1184 aa25.78■■□□□ 1.72
IVD-209ENST00000497816 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
IVD-209ENST00000497816 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
IVD-209ENST00000497816 CLASP1Q7Z460 1538 aa25.69■■□□□ 1.7
IVD-209ENST00000497816 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
IVD-209ENST00000497816 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
IVD-209ENST00000497816 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
IVD-209ENST00000497816 GRIN2AQ12879 1464 aa25.54■■□□□ 1.68
IVD-209ENST00000497816 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
IVD-209ENST00000497816 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
IVD-209ENST00000497816 CEP170Q5SW79 1584 aa25.46■■□□□ 1.67
IVD-209ENST00000497816 CYB5RLQ6IPT4 315 aa25.46■■□□□ 1.67
IVD-209ENST00000497816 NUP160Q12769 1436 aa25.44■■□□□ 1.66
IVD-209ENST00000497816 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
IVD-209ENST00000497816 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
IVD-209ENST00000497816 CUL7Q14999 1698 aa25.31■■□□□ 1.64
IVD-209ENST00000497816 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
IVD-209ENST00000497816 IGF1RP08069 1367 aa25.28■■□□□ 1.64
IVD-209ENST00000497816 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
IVD-209ENST00000497816 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms