RNA–Protein interactions for RNA: ENST00000497704.3

RN7SL612P-201, Transcript of RNA, 7SL, cytoplasmic 612, pseudogene, humanhuman

BASIC

Gene RN7SL612P, Length 295 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL612P-201ENST00000497704 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
RN7SL612P-201ENST00000497704 ABCC9O60706 1549 aa17.04■□□□□ 0.32
RN7SL612P-201ENST00000497704 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
RN7SL612P-201ENST00000497704 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
RN7SL612P-201ENST00000497704 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.14
RN7SL612P-201ENST00000497704 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
RN7SL612P-201ENST00000497704 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
RN7SL612P-201ENST00000497704 NACADO15069 1562 aa15.69■□□□□ 0.1
RN7SL612P-201ENST00000497704 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
RN7SL612P-201ENST00000497704 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
RN7SL612P-201ENST00000497704 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
RN7SL612P-201ENST00000497704 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
RN7SL612P-201ENST00000497704 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
RN7SL612P-201ENST00000497704 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
RN7SL612P-201ENST00000497704 MYO15BQ96JP2 1530 aa15.26■□□□□ 0.03
RN7SL612P-201ENST00000497704 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
RN7SL612P-201ENST00000497704 CUX2O14529 1486 aa15.02■□□□□ -0
RN7SL612P-201ENST00000497704 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
RN7SL612P-201ENST00000497704 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
RN7SL612P-201ENST00000497704 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
RN7SL612P-201ENST00000497704 TRIM41Q8WV44 630 aa14.79□□□□□ -0.04
RN7SL612P-201ENST00000497704 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
RN7SL612P-201ENST00000497704 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
RN7SL612P-201ENST00000497704 NESP48681 1621 aa14.42□□□□□ -0.1
RN7SL612P-201ENST00000497704 THOC2Q8NI27 1593 aaKnown RBP14.42□□□□□ -0.1
RN7SL612P-201ENST00000497704 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
RN7SL612P-201ENST00000497704 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
RN7SL612P-201ENST00000497704 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
RN7SL612P-201ENST00000497704 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
RN7SL612P-201ENST00000497704 OSCARQ8IYS5 282 aa14.26□□□□□ -0.13
RN7SL612P-201ENST00000497704 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
RN7SL612P-201ENST00000497704 KIF21AQ7Z4S6 1674 aa14.21□□□□□ -0.13
RN7SL612P-201ENST00000497704 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
RN7SL612P-201ENST00000497704 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
RN7SL612P-201ENST00000497704 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
RN7SL612P-201ENST00000497704 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
RN7SL612P-201ENST00000497704 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
RN7SL612P-201ENST00000497704 WDR62O43379 1518 aa14.1□□□□□ -0.15
RN7SL612P-201ENST00000497704 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
RN7SL612P-201ENST00000497704 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
RN7SL612P-201ENST00000497704 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
RN7SL612P-201ENST00000497704 CADPSQ9ULU8 1353 aa14.02□□□□□ -0.17
RN7SL612P-201ENST00000497704 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
RN7SL612P-201ENST00000497704 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
RN7SL612P-201ENST00000497704 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
RN7SL612P-201ENST00000497704 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
RN7SL612P-201ENST00000497704 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
RN7SL612P-201ENST00000497704 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
RN7SL612P-201ENST00000497704 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
RN7SL612P-201ENST00000497704 ARAP1Q96P48 1450 aa13.76□□□□□ -0.21
RN7SL612P-201ENST00000497704 URB2Q14146 1524 aaKnown RBP13.74□□□□□ -0.21
RN7SL612P-201ENST00000497704 CFTRP13569 1480 aa13.7□□□□□ -0.22
RN7SL612P-201ENST00000497704 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
RN7SL612P-201ENST00000497704 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
RN7SL612P-201ENST00000497704 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
RN7SL612P-201ENST00000497704 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
RN7SL612P-201ENST00000497704 CHD1O14646 1710 aa13.59□□□□□ -0.23
RN7SL612P-201ENST00000497704 WIZO95785 1651 aa13.57□□□□□ -0.24
RN7SL612P-201ENST00000497704 FBLN2P98095 1184 aa13.57□□□□□ -0.24
RN7SL612P-201ENST00000497704 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
RN7SL612P-201ENST00000497704 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
RN7SL612P-201ENST00000497704 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
RN7SL612P-201ENST00000497704 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
RN7SL612P-201ENST00000497704 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
RN7SL612P-201ENST00000497704 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
RN7SL612P-201ENST00000497704 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
RN7SL612P-201ENST00000497704 SYNJ1O43426 1573 aa13.4□□□□□ -0.26
RN7SL612P-201ENST00000497704 CHMP7Q8WUX9 453 aaPredicted RBP13.39□□□□□ -0.27
RN7SL612P-201ENST00000497704 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
RN7SL612P-201ENST00000497704 GAPVD1Q14C86 1478 aa13.38□□□□□ -0.27
RN7SL612P-201ENST00000497704 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
RN7SL612P-201ENST00000497704 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
RN7SL612P-201ENST00000497704 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
RN7SL612P-201ENST00000497704 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
RN7SL612P-201ENST00000497704 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
RN7SL612P-201ENST00000497704 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
RN7SL612P-201ENST00000497704 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
RN7SL612P-201ENST00000497704 SOGA1O94964 1423 aa13.27□□□□□ -0.29
RN7SL612P-201ENST00000497704 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
RN7SL612P-201ENST00000497704 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
RN7SL612P-201ENST00000497704 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
RN7SL612P-201ENST00000497704 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
RN7SL612P-201ENST00000497704 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
RN7SL612P-201ENST00000497704 FAM69CQ0P6D2 419 aa13.15□□□□□ -0.3
RN7SL612P-201ENST00000497704 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
RN7SL612P-201ENST00000497704 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
RN7SL612P-201ENST00000497704 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
RN7SL612P-201ENST00000497704 KDM6BO15054 1643 aa13.11□□□□□ -0.31
RN7SL612P-201ENST00000497704 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
RN7SL612P-201ENST00000497704 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
RN7SL612P-201ENST00000497704 PBRM1Q86U86 1689 aa13.08□□□□□ -0.32
RN7SL612P-201ENST00000497704 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
RN7SL612P-201ENST00000497704 HECW2Q9P2P5 1572 aa13.04□□□□□ -0.32
RN7SL612P-201ENST00000497704 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
RN7SL612P-201ENST00000497704 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
RN7SL612P-201ENST00000497704 NUP160Q12769 1436 aa13.03□□□□□ -0.32
RN7SL612P-201ENST00000497704 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
RN7SL612P-201ENST00000497704 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
RN7SL612P-201ENST00000497704 ADGRL1O94910 1474 aa13.01□□□□□ -0.33
RN7SL612P-201ENST00000497704 CUX1P39880 1505 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms