RNA–Protein interactions for RNA: ENST00000497659.5

FGD2-211, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 5

Gene FGD2, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-211ENST00000497659 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
FGD2-211ENST00000497659 CCDC180Q9P1Z9 1646 aa27.53■■■□□ 2
FGD2-211ENST00000497659 ABCC9O60706 1549 aa27.51■■■□□ 2
FGD2-211ENST00000497659 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
FGD2-211ENST00000497659 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
FGD2-211ENST00000497659 NACADO15069 1562 aa26.01■■□□□ 1.75
FGD2-211ENST00000497659 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
FGD2-211ENST00000497659 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
FGD2-211ENST00000497659 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
FGD2-211ENST00000497659 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
FGD2-211ENST00000497659 DCAF1Q9Y4B6 1507 aa25.67■■□□□ 1.7
FGD2-211ENST00000497659 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
FGD2-211ENST00000497659 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
FGD2-211ENST00000497659 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
FGD2-211ENST00000497659 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
FGD2-211ENST00000497659 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
FGD2-211ENST00000497659 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
FGD2-211ENST00000497659 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
FGD2-211ENST00000497659 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
FGD2-211ENST00000497659 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
FGD2-211ENST00000497659 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
FGD2-211ENST00000497659 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
FGD2-211ENST00000497659 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
FGD2-211ENST00000497659 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
FGD2-211ENST00000497659 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
FGD2-211ENST00000497659 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
FGD2-211ENST00000497659 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
FGD2-211ENST00000497659 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
FGD2-211ENST00000497659 WIZO95785 1651 aa23.72■■□□□ 1.39
FGD2-211ENST00000497659 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
FGD2-211ENST00000497659 NESP48681 1621 aa23.66■■□□□ 1.38
FGD2-211ENST00000497659 CUX2O14529 1486 aa23.56■■□□□ 1.36
FGD2-211ENST00000497659 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
FGD2-211ENST00000497659 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
FGD2-211ENST00000497659 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
FGD2-211ENST00000497659 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
FGD2-211ENST00000497659 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
FGD2-211ENST00000497659 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
FGD2-211ENST00000497659 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
FGD2-211ENST00000497659 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
FGD2-211ENST00000497659 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
FGD2-211ENST00000497659 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.29
FGD2-211ENST00000497659 CFTRP13569 1480 aa23.11■■□□□ 1.29
FGD2-211ENST00000497659 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
FGD2-211ENST00000497659 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
FGD2-211ENST00000497659 WDR62O43379 1518 aa23.03■■□□□ 1.28
FGD2-211ENST00000497659 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
FGD2-211ENST00000497659 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
FGD2-211ENST00000497659 TOPBP1Q92547 1522 aa22.66■■□□□ 1.22
FGD2-211ENST00000497659 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
FGD2-211ENST00000497659 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
FGD2-211ENST00000497659 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
FGD2-211ENST00000497659 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
FGD2-211ENST00000497659 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
FGD2-211ENST00000497659 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
FGD2-211ENST00000497659 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.18
FGD2-211ENST00000497659 POLA1P09884 1462 aaPredicted RBP22.44■■□□□ 1.18
FGD2-211ENST00000497659 CUX1P39880 1505 aa22.44■■□□□ 1.18
FGD2-211ENST00000497659 SOGA1O94964 1423 aa22.41■■□□□ 1.18
FGD2-211ENST00000497659 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
FGD2-211ENST00000497659 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
FGD2-211ENST00000497659 FBLN2P98095 1184 aa22.38■■□□□ 1.17
FGD2-211ENST00000497659 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
FGD2-211ENST00000497659 TDRD9Q8NDG6 1382 aaKnown RBP22.37■■□□□ 1.17
FGD2-211ENST00000497659 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
FGD2-211ENST00000497659 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
FGD2-211ENST00000497659 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
FGD2-211ENST00000497659 WRNQ14191 1432 aaPredicted RBP eCLIP22.33■■□□□ 1.17
FGD2-211ENST00000497659 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
FGD2-211ENST00000497659 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
FGD2-211ENST00000497659 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.14
FGD2-211ENST00000497659 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
FGD2-211ENST00000497659 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
FGD2-211ENST00000497659 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
FGD2-211ENST00000497659 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
FGD2-211ENST00000497659 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
FGD2-211ENST00000497659 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
FGD2-211ENST00000497659 CHD1O14646 1710 aa22.14■■□□□ 1.14
FGD2-211ENST00000497659 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
FGD2-211ENST00000497659 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
FGD2-211ENST00000497659 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
FGD2-211ENST00000497659 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
FGD2-211ENST00000497659 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
FGD2-211ENST00000497659 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
FGD2-211ENST00000497659 PBRM1Q86U86 1689 aa22■■□□□ 1.11
FGD2-211ENST00000497659 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
FGD2-211ENST00000497659 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
FGD2-211ENST00000497659 TRHP20396 242 aaPredicted RBP21.87■■□□□ 1.09
FGD2-211ENST00000497659 GRIN2AQ12879 1464 aa21.84■■□□□ 1.09
FGD2-211ENST00000497659 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
FGD2-211ENST00000497659 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.09
FGD2-211ENST00000497659 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
FGD2-211ENST00000497659 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
FGD2-211ENST00000497659 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
FGD2-211ENST00000497659 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
FGD2-211ENST00000497659 NUP160Q12769 1436 aa21.75■■□□□ 1.07
FGD2-211ENST00000497659 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
FGD2-211ENST00000497659 CUL7Q14999 1698 aa21.72■■□□□ 1.07
FGD2-211ENST00000497659 IGF1RP08069 1367 aa21.69■■□□□ 1.06
FGD2-211ENST00000497659 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms