RNA–Protein interactions for RNA: ENST00000497650.1

GCC1-203, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

TSL 3

Gene GCC1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-203ENST00000497650 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
GCC1-203ENST00000497650 ABCC9O60706 1549 aa24.13■■□□□ 1.45
GCC1-203ENST00000497650 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
GCC1-203ENST00000497650 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
GCC1-203ENST00000497650 RB1CC1Q8TDY2 1594 aa22.75■■□□□ 1.23
GCC1-203ENST00000497650 NACADO15069 1562 aa22.49■■□□□ 1.19
GCC1-203ENST00000497650 DCAF8L2P0C7V8 631 aa22.46■■□□□ 1.19
GCC1-203ENST00000497650 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
GCC1-203ENST00000497650 UNC13AQ9UPW8 1703 aa22.06■■□□□ 1.12
GCC1-203ENST00000497650 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
GCC1-203ENST00000497650 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
GCC1-203ENST00000497650 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
GCC1-203ENST00000497650 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.07
GCC1-203ENST00000497650 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
GCC1-203ENST00000497650 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
GCC1-203ENST00000497650 DCAF1Q9Y4B6 1507 aa21.61■■□□□ 1.05
GCC1-203ENST00000497650 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
GCC1-203ENST00000497650 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
GCC1-203ENST00000497650 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
GCC1-203ENST00000497650 CUX2O14529 1486 aa20.94■□□□□ 0.94
GCC1-203ENST00000497650 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
GCC1-203ENST00000497650 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
GCC1-203ENST00000497650 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
GCC1-203ENST00000497650 NESP48681 1621 aa20.59■□□□□ 0.89
GCC1-203ENST00000497650 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
GCC1-203ENST00000497650 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
GCC1-203ENST00000497650 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
GCC1-203ENST00000497650 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
GCC1-203ENST00000497650 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
GCC1-203ENST00000497650 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
GCC1-203ENST00000497650 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
GCC1-203ENST00000497650 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
GCC1-203ENST00000497650 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
GCC1-203ENST00000497650 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
GCC1-203ENST00000497650 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
GCC1-203ENST00000497650 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
GCC1-203ENST00000497650 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
GCC1-203ENST00000497650 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
GCC1-203ENST00000497650 WDR62O43379 1518 aa20.07■□□□□ 0.8
GCC1-203ENST00000497650 OSCARQ8IYS5 282 aa20■□□□□ 0.79
GCC1-203ENST00000497650 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
GCC1-203ENST00000497650 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
GCC1-203ENST00000497650 WIZO95785 1651 aa19.89■□□□□ 0.77
GCC1-203ENST00000497650 CFTRP13569 1480 aa19.84■□□□□ 0.77
GCC1-203ENST00000497650 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
GCC1-203ENST00000497650 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
GCC1-203ENST00000497650 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
GCC1-203ENST00000497650 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
GCC1-203ENST00000497650 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
GCC1-203ENST00000497650 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
GCC1-203ENST00000497650 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
GCC1-203ENST00000497650 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
GCC1-203ENST00000497650 ZNF608Q9ULD9 1512 aaPredicted RBP19.6■□□□□ 0.73
GCC1-203ENST00000497650 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
GCC1-203ENST00000497650 TRHP20396 242 aaPredicted RBP19.51■□□□□ 0.71
GCC1-203ENST00000497650 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
GCC1-203ENST00000497650 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
GCC1-203ENST00000497650 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
GCC1-203ENST00000497650 FBLN2P98095 1184 aa19.44■□□□□ 0.7
GCC1-203ENST00000497650 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
GCC1-203ENST00000497650 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
GCC1-203ENST00000497650 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
GCC1-203ENST00000497650 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
GCC1-203ENST00000497650 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
GCC1-203ENST00000497650 CHD1O14646 1710 aa19.3■□□□□ 0.68
GCC1-203ENST00000497650 TARBP1Q13395 1621 aaKnown RBP19.29■□□□□ 0.68
GCC1-203ENST00000497650 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
GCC1-203ENST00000497650 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
GCC1-203ENST00000497650 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
GCC1-203ENST00000497650 SOGA1O94964 1423 aa19.23■□□□□ 0.67
GCC1-203ENST00000497650 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
GCC1-203ENST00000497650 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
GCC1-203ENST00000497650 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
GCC1-203ENST00000497650 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
GCC1-203ENST00000497650 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
GCC1-203ENST00000497650 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
GCC1-203ENST00000497650 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
GCC1-203ENST00000497650 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
GCC1-203ENST00000497650 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
GCC1-203ENST00000497650 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
GCC1-203ENST00000497650 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
GCC1-203ENST00000497650 CUX1P39880 1505 aa18.99■□□□□ 0.63
GCC1-203ENST00000497650 ABCA10Q8WWZ4 1543 aa18.85■□□□□ 0.61
GCC1-203ENST00000497650 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
GCC1-203ENST00000497650 GRIN2AQ12879 1464 aa18.82■□□□□ 0.6
GCC1-203ENST00000497650 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
GCC1-203ENST00000497650 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
GCC1-203ENST00000497650 NUP160Q12769 1436 aa18.76■□□□□ 0.59
GCC1-203ENST00000497650 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
GCC1-203ENST00000497650 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
GCC1-203ENST00000497650 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
GCC1-203ENST00000497650 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
GCC1-203ENST00000497650 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
GCC1-203ENST00000497650 SHROOM2Q13796 1616 aa18.66■□□□□ 0.58
GCC1-203ENST00000497650 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.57
GCC1-203ENST00000497650 FAM69CQ0P6D2 419 aa18.64■□□□□ 0.57
GCC1-203ENST00000497650 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
GCC1-203ENST00000497650 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
GCC1-203ENST00000497650 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
GCC1-203ENST00000497650 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms