RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 NISCHQ9Y2I1 1504 aa32.05■■■□□ 2.72
BRPF1-208ENST00000497565 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
BRPF1-208ENST00000497565 ABCC9O60706 1549 aa28.33■■■□□ 2.13
BRPF1-208ENST00000497565 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
BRPF1-208ENST00000497565 NACADO15069 1562 aa27.09■■□□□ 1.93
BRPF1-208ENST00000497565 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
BRPF1-208ENST00000497565 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
BRPF1-208ENST00000497565 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
BRPF1-208ENST00000497565 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
BRPF1-208ENST00000497565 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
BRPF1-208ENST00000497565 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
BRPF1-208ENST00000497565 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
BRPF1-208ENST00000497565 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
BRPF1-208ENST00000497565 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
BRPF1-208ENST00000497565 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
BRPF1-208ENST00000497565 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
BRPF1-208ENST00000497565 CC2D2AQ9P2K1 1620 aa25.62■■□□□ 1.69
BRPF1-208ENST00000497565 CECR2Q9BXF3 1484 aa25.55■■□□□ 1.68
BRPF1-208ENST00000497565 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
BRPF1-208ENST00000497565 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
BRPF1-208ENST00000497565 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
BRPF1-208ENST00000497565 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
BRPF1-208ENST00000497565 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
BRPF1-208ENST00000497565 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
BRPF1-208ENST00000497565 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
BRPF1-208ENST00000497565 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
BRPF1-208ENST00000497565 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
BRPF1-208ENST00000497565 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
BRPF1-208ENST00000497565 CUX2O14529 1486 aa24.43■■□□□ 1.5
BRPF1-208ENST00000497565 NESP48681 1621 aa24.38■■□□□ 1.49
BRPF1-208ENST00000497565 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
BRPF1-208ENST00000497565 WIZO95785 1651 aa24.31■■□□□ 1.48
BRPF1-208ENST00000497565 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
BRPF1-208ENST00000497565 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
BRPF1-208ENST00000497565 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
BRPF1-208ENST00000497565 DNAJC5Q9H3Z4 198 aa24.14■■□□□ 1.45
BRPF1-208ENST00000497565 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
BRPF1-208ENST00000497565 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
BRPF1-208ENST00000497565 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
BRPF1-208ENST00000497565 CFTRP13569 1480 aa24.01■■□□□ 1.43
BRPF1-208ENST00000497565 MRC2Q9UBG0 1479 aa23.98■■□□□ 1.43
BRPF1-208ENST00000497565 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
BRPF1-208ENST00000497565 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
BRPF1-208ENST00000497565 WDR62O43379 1518 aa23.89■■□□□ 1.42
BRPF1-208ENST00000497565 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
BRPF1-208ENST00000497565 PRDM2Q13029 1718 aa23.71■■□□□ 1.39
BRPF1-208ENST00000497565 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
BRPF1-208ENST00000497565 ABCC8Q09428 1581 aa23.59■■□□□ 1.37
BRPF1-208ENST00000497565 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
BRPF1-208ENST00000497565 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
BRPF1-208ENST00000497565 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
BRPF1-208ENST00000497565 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
BRPF1-208ENST00000497565 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
BRPF1-208ENST00000497565 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
BRPF1-208ENST00000497565 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
BRPF1-208ENST00000497565 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
BRPF1-208ENST00000497565 SOGA1O94964 1423 aa23.21■■□□□ 1.31
BRPF1-208ENST00000497565 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
BRPF1-208ENST00000497565 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.32e-6■■■□□ 15.2
BRPF1-208ENST00000497565 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
BRPF1-208ENST00000497565 CUX1P39880 1505 aa23.13■■□□□ 1.29
BRPF1-208ENST00000497565 FGD5Q6ZNL6 1462 aa23.13■■□□□ 1.29
BRPF1-208ENST00000497565 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
BRPF1-208ENST00000497565 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
BRPF1-208ENST00000497565 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
BRPF1-208ENST00000497565 FBLN2P98095 1184 aa23■■□□□ 1.27
BRPF1-208ENST00000497565 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
BRPF1-208ENST00000497565 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
BRPF1-208ENST00000497565 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
BRPF1-208ENST00000497565 CHD1O14646 1710 aa22.94■■□□□ 1.26
BRPF1-208ENST00000497565 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
BRPF1-208ENST00000497565 WRNQ14191 1432 aaPredicted RBP eCLIP22.94■■□□□ 1.26
BRPF1-208ENST00000497565 SNAPC4Q5SXM2 1469 aa22.93■■□□□ 1.26
BRPF1-208ENST00000497565 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
BRPF1-208ENST00000497565 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
BRPF1-208ENST00000497565 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
BRPF1-208ENST00000497565 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
BRPF1-208ENST00000497565 ARHGEF11O15085 1522 aa22.9■■□□□ 1.26
BRPF1-208ENST00000497565 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
BRPF1-208ENST00000497565 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
BRPF1-208ENST00000497565 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
BRPF1-208ENST00000497565 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
BRPF1-208ENST00000497565 ABCA5Q8WWZ7 1642 aa22.81■■□□□ 1.24
BRPF1-208ENST00000497565 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
BRPF1-208ENST00000497565 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
BRPF1-208ENST00000497565 CLASP1Q7Z460 1538 aa22.75■■□□□ 1.23
BRPF1-208ENST00000497565 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
BRPF1-208ENST00000497565 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
BRPF1-208ENST00000497565 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
BRPF1-208ENST00000497565 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
BRPF1-208ENST00000497565 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
BRPF1-208ENST00000497565 NUP160Q12769 1436 aa22.59■■□□□ 1.21
BRPF1-208ENST00000497565 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
BRPF1-208ENST00000497565 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
BRPF1-208ENST00000497565 IGF1RP08069 1367 aa22.45■■□□□ 1.18
BRPF1-208ENST00000497565 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
BRPF1-208ENST00000497565 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
BRPF1-208ENST00000497565 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
BRPF1-208ENST00000497565 CUL7Q14999 1698 aa22.37■■□□□ 1.17
BRPF1-208ENST00000497565 PRG4Q92954 1404 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms