RNA–Protein interactions for RNA: ENST00000497550.1

CXorf40B-207, Transcript of chromosome X open reading frame 40B, humanhuman

TSL 5

Gene CXorf40B, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40B-207ENST00000497550 NISCHQ9Y2I1 1504 aa42.12■■■■■ 4.33
CXorf40B-207ENST00000497550 ABCC9O60706 1549 aa37.74■■■■□ 3.63
CXorf40B-207ENST00000497550 CCDC180Q9P1Z9 1646 aa37.66■■■■□ 3.62
CXorf40B-207ENST00000497550 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
CXorf40B-207ENST00000497550 DCAF8L2P0C7V8 631 aa35.79■■■■□ 3.32
CXorf40B-207ENST00000497550 NACADO15069 1562 aa35.7■■■■□ 3.31
CXorf40B-207ENST00000497550 DNAJC5BQ9UF47 199 aa35.25■■■■□ 3.23
CXorf40B-207ENST00000497550 PABPN1Q86U42 306 aaKnown RBP eCLIP35.22■■■■□ 3.23
CXorf40B-207ENST00000497550 MYO15BQ96JP2 1530 aa35.22■■■■□ 3.23
CXorf40B-207ENST00000497550 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
CXorf40B-207ENST00000497550 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
CXorf40B-207ENST00000497550 UNC13AQ9UPW8 1703 aa34.78■■■■□ 3.16
CXorf40B-207ENST00000497550 BICRAQ9NZM4 1560 aa34.72■■■■□ 3.15
CXorf40B-207ENST00000497550 SHROOM4Q9ULL8 1493 aa34.46■■■■□ 3.11
CXorf40B-207ENST00000497550 SCRIBQ14160 1630 aa34.41■■■■□ 3.1
CXorf40B-207ENST00000497550 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.04
CXorf40B-207ENST00000497550 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
CXorf40B-207ENST00000497550 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
CXorf40B-207ENST00000497550 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
CXorf40B-207ENST00000497550 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
CXorf40B-207ENST00000497550 SMARCA2P51531 1590 aa32.82■■■□□ 2.84
CXorf40B-207ENST00000497550 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
CXorf40B-207ENST00000497550 BAZ1AQ9NRL2 1556 aaPredicted RBP32.73■■■□□ 2.83
CXorf40B-207ENST00000497550 ERCC6Q03468 1493 aa32.69■■■□□ 2.82
CXorf40B-207ENST00000497550 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
CXorf40B-207ENST00000497550 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
CXorf40B-207ENST00000497550 CUX2O14529 1486 aa32.51■■■□□ 2.79
CXorf40B-207ENST00000497550 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.79
CXorf40B-207ENST00000497550 MROH2BQ7Z745 1585 aa32.42■■■□□ 2.78
CXorf40B-207ENST00000497550 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
CXorf40B-207ENST00000497550 NESP48681 1621 aa32.37■■■□□ 2.77
CXorf40B-207ENST00000497550 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
CXorf40B-207ENST00000497550 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
CXorf40B-207ENST00000497550 CADPSQ9ULU8 1353 aa32.04■■■□□ 2.72
CXorf40B-207ENST00000497550 WIZO95785 1651 aa31.98■■■□□ 2.71
CXorf40B-207ENST00000497550 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
CXorf40B-207ENST00000497550 RSF1Q96T23 1441 aaPredicted RBP31.85■■■□□ 2.69
CXorf40B-207ENST00000497550 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
CXorf40B-207ENST00000497550 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
CXorf40B-207ENST00000497550 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
CXorf40B-207ENST00000497550 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
CXorf40B-207ENST00000497550 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
CXorf40B-207ENST00000497550 CFTRP13569 1480 aa31.63■■■□□ 2.65
CXorf40B-207ENST00000497550 WDR62O43379 1518 aa31.62■■■□□ 2.65
CXorf40B-207ENST00000497550 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
CXorf40B-207ENST00000497550 URB2Q14146 1524 aaKnown RBP31.3■■■□□ 2.6
CXorf40B-207ENST00000497550 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
CXorf40B-207ENST00000497550 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
CXorf40B-207ENST00000497550 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
CXorf40B-207ENST00000497550 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
CXorf40B-207ENST00000497550 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
CXorf40B-207ENST00000497550 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
CXorf40B-207ENST00000497550 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
CXorf40B-207ENST00000497550 DNMBPQ6XZF7 1577 aa30.89■■■□□ 2.54
CXorf40B-207ENST00000497550 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
CXorf40B-207ENST00000497550 AQRO60306 1485 aaKnown RBP eCLIP30.7■■■□□ 2.58e-7■■■■■ 28.7
CXorf40B-207ENST00000497550 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.5
CXorf40B-207ENST00000497550 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
CXorf40B-207ENST00000497550 FBLN2P98095 1184 aa30.66■■■□□ 2.5
CXorf40B-207ENST00000497550 SOGA1O94964 1423 aa30.65■■■□□ 2.5
CXorf40B-207ENST00000497550 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
CXorf40B-207ENST00000497550 RAD54L2Q9Y4B4 1467 aa30.59■■■□□ 2.49
CXorf40B-207ENST00000497550 TDRD9Q8NDG6 1382 aaKnown RBP30.57■■■□□ 2.48
CXorf40B-207ENST00000497550 FGD5Q6ZNL6 1462 aa30.54■■■□□ 2.48
CXorf40B-207ENST00000497550 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.47
CXorf40B-207ENST00000497550 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.47
CXorf40B-207ENST00000497550 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.47
CXorf40B-207ENST00000497550 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
CXorf40B-207ENST00000497550 CUX1P39880 1505 aa30.47■■■□□ 2.47
CXorf40B-207ENST00000497550 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
CXorf40B-207ENST00000497550 WDR97A6NE52 1622 aa30.41■■■□□ 2.46
CXorf40B-207ENST00000497550 CYB5RLQ6IPT4 315 aa30.41■■■□□ 2.46
CXorf40B-207ENST00000497550 SNAPC4Q5SXM2 1469 aa30.39■■■□□ 2.46
CXorf40B-207ENST00000497550 GRIN2BQ13224 1484 aa30.37■■■□□ 2.45
CXorf40B-207ENST00000497550 CHD1O14646 1710 aa30.36■■■□□ 2.45
CXorf40B-207ENST00000497550 MAGI1Q96QZ7 1491 aaPredicted RBP30.33■■■□□ 2.45
CXorf40B-207ENST00000497550 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
CXorf40B-207ENST00000497550 SYNJ2O15056 1496 aa30.23■■■□□ 2.43
CXorf40B-207ENST00000497550 SYNJ1O43426 1573 aa30.21■■■□□ 2.43
CXorf40B-207ENST00000497550 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
CXorf40B-207ENST00000497550 ABCA10Q8WWZ4 1543 aa30.19■■■□□ 2.42
CXorf40B-207ENST00000497550 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
CXorf40B-207ENST00000497550 TRHP20396 242 aaPredicted RBP30.14■■■□□ 2.42
CXorf40B-207ENST00000497550 CLASP1Q7Z460 1538 aa30.12■■■□□ 2.41
CXorf40B-207ENST00000497550 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
CXorf40B-207ENST00000497550 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
CXorf40B-207ENST00000497550 TOP2BQ02880 1626 aa30■■■□□ 2.39
CXorf40B-207ENST00000497550 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
CXorf40B-207ENST00000497550 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
CXorf40B-207ENST00000497550 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
CXorf40B-207ENST00000497550 ADAMTS12P58397 1594 aa29.85■■■□□ 2.37
CXorf40B-207ENST00000497550 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
CXorf40B-207ENST00000497550 NUP160Q12769 1436 aa29.8■■■□□ 2.36
CXorf40B-207ENST00000497550 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
CXorf40B-207ENST00000497550 JPH4Q96JJ6 628 aa29.62■■■□□ 2.33
CXorf40B-207ENST00000497550 ERCC6L2Q5T890 1561 aa29.61■■■□□ 2.33
CXorf40B-207ENST00000497550 KIF27Q86VH2 1401 aa29.59■■■□□ 2.33
CXorf40B-207ENST00000497550 PRG4Q92954 1404 aaPredicted RBP29.59■■■□□ 2.33
CXorf40B-207ENST00000497550 SHROOM2Q13796 1616 aa29.54■■■□□ 2.32
CXorf40B-207ENST00000497550 IGF1RP08069 1367 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms