RNA–Protein interactions for RNA: ENST00000497530.5

ELL3-207, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-207ENST00000497530 NISCHQ9Y2I1 1504 aa37.57■■■■□ 3.61
ELL3-207ENST00000497530 ABCC9O60706 1549 aa35.01■■■■□ 3.2
ELL3-207ENST00000497530 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
ELL3-207ENST00000497530 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
ELL3-207ENST00000497530 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
ELL3-207ENST00000497530 NACADO15069 1562 aa32.53■■■□□ 2.8
ELL3-207ENST00000497530 PABPN1Q86U42 306 aaKnown RBP eCLIP32.42■■■□□ 2.78
ELL3-207ENST00000497530 UNC13AQ9UPW8 1703 aa32.18■■■□□ 2.74
ELL3-207ENST00000497530 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
ELL3-207ENST00000497530 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
ELL3-207ENST00000497530 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
ELL3-207ENST00000497530 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
ELL3-207ENST00000497530 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
ELL3-207ENST00000497530 CC2D2AQ9P2K1 1620 aa31.61■■■□□ 2.65
ELL3-207ENST00000497530 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
ELL3-207ENST00000497530 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
ELL3-207ENST00000497530 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
ELL3-207ENST00000497530 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
ELL3-207ENST00000497530 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
ELL3-207ENST00000497530 CUX2O14529 1486 aa30.66■■■□□ 2.5
ELL3-207ENST00000497530 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
ELL3-207ENST00000497530 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
ELL3-207ENST00000497530 TRIM41Q8WV44 630 aa29.83■■■□□ 2.37
ELL3-207ENST00000497530 NESP48681 1621 aa29.81■■■□□ 2.36
ELL3-207ENST00000497530 ATAD2BQ9ULI0 1458 aa29.79■■■□□ 2.36
ELL3-207ENST00000497530 THOC2Q8NI27 1593 aaKnown RBP29.75■■■□□ 2.35
ELL3-207ENST00000497530 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
ELL3-207ENST00000497530 SMARCA2P51531 1590 aa29.66■■■□□ 2.34
ELL3-207ENST00000497530 LAMC3Q9Y6N6 1575 aa29.51■■■□□ 2.31
ELL3-207ENST00000497530 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
ELL3-207ENST00000497530 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
ELL3-207ENST00000497530 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
ELL3-207ENST00000497530 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
ELL3-207ENST00000497530 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
ELL3-207ENST00000497530 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
ELL3-207ENST00000497530 MRC2Q9UBG0 1479 aa29.16■■■□□ 2.26
ELL3-207ENST00000497530 WDR62O43379 1518 aa29.14■■■□□ 2.25
ELL3-207ENST00000497530 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
ELL3-207ENST00000497530 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
ELL3-207ENST00000497530 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
ELL3-207ENST00000497530 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
ELL3-207ENST00000497530 RIMBP3CA6NJZ7 1639 aa28.77■■■□□ 2.2
ELL3-207ENST00000497530 RIMBP3BA6NNM3 1639 aa28.77■■■□□ 2.2
ELL3-207ENST00000497530 RIMBP3Q9UFD9 1639 aa28.77■■■□□ 2.2
ELL3-207ENST00000497530 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
ELL3-207ENST00000497530 ARHGEF11O15085 1522 aa28.59■■■□□ 2.17
ELL3-207ENST00000497530 CFTRP13569 1480 aa28.54■■■□□ 2.16
ELL3-207ENST00000497530 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
ELL3-207ENST00000497530 WIZO95785 1651 aa28.49■■■□□ 2.15
ELL3-207ENST00000497530 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
ELL3-207ENST00000497530 TRHP20396 242 aaPredicted RBP28.37■■■□□ 2.13
ELL3-207ENST00000497530 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
ELL3-207ENST00000497530 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
ELL3-207ENST00000497530 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
ELL3-207ENST00000497530 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
ELL3-207ENST00000497530 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
ELL3-207ENST00000497530 EIF4G3O43432 1585 aaKnown RBP28.13■■■□□ 2.09
ELL3-207ENST00000497530 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
ELL3-207ENST00000497530 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
ELL3-207ENST00000497530 CHD1O14646 1710 aa28.09■■■□□ 2.09
ELL3-207ENST00000497530 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
ELL3-207ENST00000497530 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
ELL3-207ENST00000497530 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.06
ELL3-207ENST00000497530 FBLN2P98095 1184 aa27.91■■■□□ 2.06
ELL3-207ENST00000497530 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
ELL3-207ENST00000497530 DNMBPQ6XZF7 1577 aa27.89■■■□□ 2.05
ELL3-207ENST00000497530 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
ELL3-207ENST00000497530 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
ELL3-207ENST00000497530 POLA1P09884 1462 aaPredicted RBP27.72■■■□□ 2.03
ELL3-207ENST00000497530 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
ELL3-207ENST00000497530 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.02
ELL3-207ENST00000497530 TDRD9Q8NDG6 1382 aaKnown RBP27.61■■■□□ 2.01
ELL3-207ENST00000497530 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
ELL3-207ENST00000497530 RAD54L2Q9Y4B4 1467 aa27.6■■■□□ 2.01
ELL3-207ENST00000497530 CHMP7Q8WUX9 453 aaPredicted RBP27.59■■■□□ 2.01
ELL3-207ENST00000497530 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
ELL3-207ENST00000497530 SOGA1O94964 1423 aa27.57■■■□□ 2
ELL3-207ENST00000497530 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
ELL3-207ENST00000497530 SYNJ2O15056 1496 aa27.49■■□□□ 1.99
ELL3-207ENST00000497530 GRIN2BQ13224 1484 aa27.45■■□□□ 1.99
ELL3-207ENST00000497530 FGD5Q6ZNL6 1462 aa27.39■■□□□ 1.98
ELL3-207ENST00000497530 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
ELL3-207ENST00000497530 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
ELL3-207ENST00000497530 CUX1P39880 1505 aa27.22■■□□□ 1.95
ELL3-207ENST00000497530 KIF13AQ9H1H9 1805 aa27.2■■□□□ 1.95
ELL3-207ENST00000497530 ILDR1Q86SU0 546 aaPredicted RBP27.19■■□□□ 1.94
ELL3-207ENST00000497530 CEP170Q5SW79 1584 aa27.14■■□□□ 1.93
ELL3-207ENST00000497530 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
ELL3-207ENST00000497530 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
ELL3-207ENST00000497530 NUP160Q12769 1436 aa27.07■■□□□ 1.92
ELL3-207ENST00000497530 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
ELL3-207ENST00000497530 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
ELL3-207ENST00000497530 KDM4FA0A1W2PPD8 638 aa27.03■■□□□ 1.92
ELL3-207ENST00000497530 ABCC10Q5T3U5 1492 aa26.96■■□□□ 1.91
ELL3-207ENST00000497530 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
ELL3-207ENST00000497530 FAM69CQ0P6D2 419 aa26.94■■□□□ 1.9
ELL3-207ENST00000497530 MAPKBP1O60336 1514 aa26.86■■□□□ 1.89
ELL3-207ENST00000497530 KDM6BO15054 1643 aa26.86■■□□□ 1.89
ELL3-207ENST00000497530 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
ELL3-207ENST00000497530 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms