RNA–Protein interactions for RNA: ENST00000497464.5

TPRKB-210, Transcript of TP53RK binding protein, humanhuman

TSL 2

Gene TPRKB, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-210ENST00000497464 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
TPRKB-210ENST00000497464 NISCHQ9Y2I1 1504 aa28.97■■■□□ 2.23
TPRKB-210ENST00000497464 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
TPRKB-210ENST00000497464 ABCC9O60706 1549 aa26.57■■□□□ 1.84
TPRKB-210ENST00000497464 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
TPRKB-210ENST00000497464 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
TPRKB-210ENST00000497464 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
TPRKB-210ENST00000497464 DNAJC5BQ9UF47 199 aa25.23■■□□□ 1.63
TPRKB-210ENST00000497464 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
TPRKB-210ENST00000497464 NACADO15069 1562 aa24.84■■□□□ 1.57
TPRKB-210ENST00000497464 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
TPRKB-210ENST00000497464 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
TPRKB-210ENST00000497464 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
TPRKB-210ENST00000497464 BICRAQ9NZM4 1560 aa24.38■■□□□ 1.49
TPRKB-210ENST00000497464 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
TPRKB-210ENST00000497464 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
TPRKB-210ENST00000497464 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
TPRKB-210ENST00000497464 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
TPRKB-210ENST00000497464 FOXD1Q16676 465 aa23.93■■□□□ 1.42
TPRKB-210ENST00000497464 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
TPRKB-210ENST00000497464 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.42
TPRKB-210ENST00000497464 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
TPRKB-210ENST00000497464 EIF4G1Q04637 1599 aaKnown RBP23.83■■□□□ 1.41
TPRKB-210ENST00000497464 POTEDQ86YR6 584 aa23.52■■□□□ 1.36
TPRKB-210ENST00000497464 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
TPRKB-210ENST00000497464 CUX2O14529 1486 aa23.05■■□□□ 1.28
TPRKB-210ENST00000497464 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
TPRKB-210ENST00000497464 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
TPRKB-210ENST00000497464 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
TPRKB-210ENST00000497464 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
TPRKB-210ENST00000497464 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
TPRKB-210ENST00000497464 MSH5O43196 834 aa22.73■■□□□ 1.23
TPRKB-210ENST00000497464 NESP48681 1621 aa22.7■■□□□ 1.22
TPRKB-210ENST00000497464 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
TPRKB-210ENST00000497464 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
TPRKB-210ENST00000497464 THOC2Q8NI27 1593 aaKnown RBP22.56■■□□□ 1.2
TPRKB-210ENST00000497464 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
TPRKB-210ENST00000497464 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
TPRKB-210ENST00000497464 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
TPRKB-210ENST00000497464 KIF21AQ7Z4S6 1674 aa22.43■■□□□ 1.18
TPRKB-210ENST00000497464 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
TPRKB-210ENST00000497464 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
TPRKB-210ENST00000497464 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
TPRKB-210ENST00000497464 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
TPRKB-210ENST00000497464 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
TPRKB-210ENST00000497464 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
TPRKB-210ENST00000497464 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
TPRKB-210ENST00000497464 WDR62O43379 1518 aa22.16■■□□□ 1.14
TPRKB-210ENST00000497464 WIZO95785 1651 aa22.05■■□□□ 1.12
TPRKB-210ENST00000497464 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
TPRKB-210ENST00000497464 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
TPRKB-210ENST00000497464 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
TPRKB-210ENST00000497464 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
TPRKB-210ENST00000497464 ADRA2BP18089 450 aa21.92■■□□□ 1.1
TPRKB-210ENST00000497464 CFTRP13569 1480 aa21.88■■□□□ 1.09
TPRKB-210ENST00000497464 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
TPRKB-210ENST00000497464 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
TPRKB-210ENST00000497464 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
TPRKB-210ENST00000497464 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
TPRKB-210ENST00000497464 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
TPRKB-210ENST00000497464 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
TPRKB-210ENST00000497464 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
TPRKB-210ENST00000497464 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
TPRKB-210ENST00000497464 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
TPRKB-210ENST00000497464 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
TPRKB-210ENST00000497464 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
TPRKB-210ENST00000497464 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
TPRKB-210ENST00000497464 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
TPRKB-210ENST00000497464 CYB5RLQ6IPT4 315 aa21.45■■□□□ 1.02
TPRKB-210ENST00000497464 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
TPRKB-210ENST00000497464 CHD1O14646 1710 aa21.42■■□□□ 1.02
TPRKB-210ENST00000497464 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
TPRKB-210ENST00000497464 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
TPRKB-210ENST00000497464 AQRO60306 1485 aaKnown RBP eCLIP21.36■■□□□ 1.012e-9■■■■■ 39.4
TPRKB-210ENST00000497464 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
TPRKB-210ENST00000497464 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
TPRKB-210ENST00000497464 FBLN2P98095 1184 aa21.32■■□□□ 1
TPRKB-210ENST00000497464 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
TPRKB-210ENST00000497464 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
TPRKB-210ENST00000497464 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
TPRKB-210ENST00000497464 SOGA1O94964 1423 aa21.16■□□□□ 0.98
TPRKB-210ENST00000497464 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.98
TPRKB-210ENST00000497464 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
TPRKB-210ENST00000497464 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
TPRKB-210ENST00000497464 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
TPRKB-210ENST00000497464 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
TPRKB-210ENST00000497464 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
TPRKB-210ENST00000497464 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
TPRKB-210ENST00000497464 GRIN2BQ13224 1484 aa21.03■□□□□ 0.96
TPRKB-210ENST00000497464 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
TPRKB-210ENST00000497464 CUX1P39880 1505 aa20.99■□□□□ 0.95
TPRKB-210ENST00000497464 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
TPRKB-210ENST00000497464 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
TPRKB-210ENST00000497464 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
TPRKB-210ENST00000497464 ABCA10Q8WWZ4 1543 aa20.81■□□□□ 0.92
TPRKB-210ENST00000497464 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
TPRKB-210ENST00000497464 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
TPRKB-210ENST00000497464 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
TPRKB-210ENST00000497464 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
TPRKB-210ENST00000497464 NUP160Q12769 1436 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms