RNA–Protein interactions for RNA: ENST00000497450.5

EBF4-209, Transcript of early B cell factor 4, humanhuman

TSL 3

Gene EBF4, Length 444 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4-209ENST00000497450 NISCHQ9Y2I1 1504 aa40.35■■■■■ 4.05
EBF4-209ENST00000497450 CCDC180Q9P1Z9 1646 aa36.06■■■■□ 3.36
EBF4-209ENST00000497450 ABCC9O60706 1549 aa36.04■■■■□ 3.36
EBF4-209ENST00000497450 RB1CC1Q8TDY2 1594 aa34.32■■■■□ 3.08
EBF4-209ENST00000497450 NACADO15069 1562 aa34.15■■■■□ 3.06
EBF4-209ENST00000497450 DCAF8L2P0C7V8 631 aa34.06■■■■□ 3.04
EBF4-209ENST00000497450 DNAJC5BQ9UF47 199 aa33.87■■■■□ 3.01
EBF4-209ENST00000497450 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
EBF4-209ENST00000497450 PABPN1Q86U42 306 aaKnown RBP eCLIP33.65■■■□□ 2.98
EBF4-209ENST00000497450 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
EBF4-209ENST00000497450 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
EBF4-209ENST00000497450 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
EBF4-209ENST00000497450 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
EBF4-209ENST00000497450 SHROOM4Q9ULL8 1493 aa32.87■■■□□ 2.85
EBF4-209ENST00000497450 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
EBF4-209ENST00000497450 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
EBF4-209ENST00000497450 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.79
EBF4-209ENST00000497450 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
EBF4-209ENST00000497450 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
EBF4-209ENST00000497450 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
EBF4-209ENST00000497450 SMARCA4P51532 1647 aa31.4■■■□□ 2.62
EBF4-209ENST00000497450 SMARCA2P51531 1590 aa31.33■■■□□ 2.61
EBF4-209ENST00000497450 HMGXB3Q12766 1538 aa31.27■■■□□ 2.6
EBF4-209ENST00000497450 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.6
EBF4-209ENST00000497450 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
EBF4-209ENST00000497450 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
EBF4-209ENST00000497450 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
EBF4-209ENST00000497450 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
EBF4-209ENST00000497450 CUX2O14529 1486 aa31.01■■■□□ 2.56
EBF4-209ENST00000497450 DNAJC5Q9H3Z4 198 aa31.01■■■□□ 2.55
EBF4-209ENST00000497450 NESP48681 1621 aa31.01■■■□□ 2.55
EBF4-209ENST00000497450 LAMC3Q9Y6N6 1575 aa30.78■■■□□ 2.52
EBF4-209ENST00000497450 WIZO95785 1651 aa30.68■■■□□ 2.5
EBF4-209ENST00000497450 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.49
EBF4-209ENST00000497450 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
EBF4-209ENST00000497450 THOC2Q8NI27 1593 aaKnown RBP30.61■■■□□ 2.49
EBF4-209ENST00000497450 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
EBF4-209ENST00000497450 RSF1Q96T23 1441 aaPredicted RBP30.52■■■□□ 2.48
EBF4-209ENST00000497450 MRC2Q9UBG0 1479 aa30.32■■■□□ 2.44
EBF4-209ENST00000497450 TOP2AP11388 1531 aaKnown RBP30.29■■■□□ 2.44
EBF4-209ENST00000497450 CFTRP13569 1480 aa30.28■■■□□ 2.44
EBF4-209ENST00000497450 WDR62O43379 1518 aa30.25■■■□□ 2.43
EBF4-209ENST00000497450 FANCD2Q9BXW9 1451 aa30.22■■■□□ 2.43
EBF4-209ENST00000497450 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
EBF4-209ENST00000497450 CCDC88BA6NC98 1476 aa30.02■■■□□ 2.4
EBF4-209ENST00000497450 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
EBF4-209ENST00000497450 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
EBF4-209ENST00000497450 OSCARQ8IYS5 282 aa29.71■■■□□ 2.35
EBF4-209ENST00000497450 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
EBF4-209ENST00000497450 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
EBF4-209ENST00000497450 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
EBF4-209ENST00000497450 TRIM41Q8WV44 630 aa29.61■■■□□ 2.33
EBF4-209ENST00000497450 ZNF608Q9ULD9 1512 aaPredicted RBP29.6■■■□□ 2.33
EBF4-209ENST00000497450 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
EBF4-209ENST00000497450 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
EBF4-209ENST00000497450 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.29
EBF4-209ENST00000497450 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
EBF4-209ENST00000497450 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
EBF4-209ENST00000497450 SOGA1O94964 1423 aa29.28■■■□□ 2.28
EBF4-209ENST00000497450 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
EBF4-209ENST00000497450 SUPT5HO00267 1087 aaKnown RBP29.24■■■□□ 2.27
EBF4-209ENST00000497450 TDRD9Q8NDG6 1382 aaKnown RBP29.21■■■□□ 2.27
EBF4-209ENST00000497450 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
EBF4-209ENST00000497450 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
EBF4-209ENST00000497450 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
EBF4-209ENST00000497450 CUX1P39880 1505 aa29.19■■■□□ 2.26
EBF4-209ENST00000497450 FGD5Q6ZNL6 1462 aa29.18■■■□□ 2.26
EBF4-209ENST00000497450 FBLN2P98095 1184 aa29.14■■■□□ 2.26
EBF4-209ENST00000497450 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
EBF4-209ENST00000497450 CHD1O14646 1710 aa29.1■■■□□ 2.25
EBF4-209ENST00000497450 WDR97A6NE52 1622 aa29.05■■■□□ 2.24
EBF4-209ENST00000497450 CYB5RLQ6IPT4 315 aa29.01■■■□□ 2.23
EBF4-209ENST00000497450 SNAPC4Q5SXM2 1469 aa29.01■■■□□ 2.23
EBF4-209ENST00000497450 CHMP7Q8WUX9 453 aaPredicted RBP28.97■■■□□ 2.23
EBF4-209ENST00000497450 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
EBF4-209ENST00000497450 MAGI1Q96QZ7 1491 aaPredicted RBP28.94■■■□□ 2.22
EBF4-209ENST00000497450 GAPVD1Q14C86 1478 aa28.9■■■□□ 2.22
EBF4-209ENST00000497450 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
EBF4-209ENST00000497450 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
EBF4-209ENST00000497450 SYNJ2O15056 1496 aa28.85■■■□□ 2.21
EBF4-209ENST00000497450 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
EBF4-209ENST00000497450 SYNJ1O43426 1573 aa28.79■■■□□ 2.2
EBF4-209ENST00000497450 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
EBF4-209ENST00000497450 ABCA5Q8WWZ7 1642 aa28.77■■■□□ 2.2
EBF4-209ENST00000497450 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
EBF4-209ENST00000497450 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
EBF4-209ENST00000497450 BIVM-ERCC5R4GMW8 1640 aa28.7■■■□□ 2.19
EBF4-209ENST00000497450 TRHP20396 242 aaPredicted RBP28.6■■■□□ 2.17
EBF4-209ENST00000497450 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
EBF4-209ENST00000497450 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
EBF4-209ENST00000497450 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
EBF4-209ENST00000497450 NUP160Q12769 1436 aa28.52■■■□□ 2.16
EBF4-209ENST00000497450 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
EBF4-209ENST00000497450 CEP170Q5SW79 1584 aa28.47■■■□□ 2.15
EBF4-209ENST00000497450 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
EBF4-209ENST00000497450 SHROOM2Q13796 1616 aa28.33■■■□□ 2.13
EBF4-209ENST00000497450 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
EBF4-209ENST00000497450 IGF1RP08069 1367 aa28.26■■■□□ 2.12
EBF4-209ENST00000497450 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
EBF4-209ENST00000497450 KIF27Q86VH2 1401 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms