RNA–Protein interactions for RNA: ENST00000497430.1

RFC2-212, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 753 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-212ENST00000497430 NISCHQ9Y2I1 1504 aa26.93■■□□□ 1.9
RFC2-212ENST00000497430 ABCC9O60706 1549 aa24.15■■□□□ 1.46
RFC2-212ENST00000497430 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
RFC2-212ENST00000497430 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
RFC2-212ENST00000497430 NACADO15069 1562 aa22.8■■□□□ 1.24
RFC2-212ENST00000497430 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
RFC2-212ENST00000497430 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
RFC2-212ENST00000497430 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
RFC2-212ENST00000497430 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
RFC2-212ENST00000497430 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
RFC2-212ENST00000497430 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
RFC2-212ENST00000497430 ZCCHC6Q5VYS8 1495 aaKnown RBP22.3■■□□□ 1.16
RFC2-212ENST00000497430 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
RFC2-212ENST00000497430 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
RFC2-212ENST00000497430 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
RFC2-212ENST00000497430 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
RFC2-212ENST00000497430 EIF4G1Q04637 1599 aaKnown RBP21.77■■□□□ 1.08
RFC2-212ENST00000497430 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
RFC2-212ENST00000497430 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
RFC2-212ENST00000497430 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
RFC2-212ENST00000497430 SMARCA4P51532 1647 aa21■□□□□ 0.95
RFC2-212ENST00000497430 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
RFC2-212ENST00000497430 HMGXB3Q12766 1538 aa20.89■□□□□ 0.94
RFC2-212ENST00000497430 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
RFC2-212ENST00000497430 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
RFC2-212ENST00000497430 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
RFC2-212ENST00000497430 NESP48681 1621 aa20.79■□□□□ 0.92
RFC2-212ENST00000497430 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
RFC2-212ENST00000497430 CUX2O14529 1486 aa20.75■□□□□ 0.91
RFC2-212ENST00000497430 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
RFC2-212ENST00000497430 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
RFC2-212ENST00000497430 LAMC3Q9Y6N6 1575 aa20.58■□□□□ 0.88
RFC2-212ENST00000497430 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
RFC2-212ENST00000497430 WIZO95785 1651 aa20.55■□□□□ 0.88
RFC2-212ENST00000497430 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
RFC2-212ENST00000497430 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
RFC2-212ENST00000497430 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
RFC2-212ENST00000497430 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
RFC2-212ENST00000497430 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
RFC2-212ENST00000497430 WDR62O43379 1518 aa20.24■□□□□ 0.83
RFC2-212ENST00000497430 CFTRP13569 1480 aa20.21■□□□□ 0.83
RFC2-212ENST00000497430 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
RFC2-212ENST00000497430 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
RFC2-212ENST00000497430 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
RFC2-212ENST00000497430 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
RFC2-212ENST00000497430 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
RFC2-212ENST00000497430 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
RFC2-212ENST00000497430 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
RFC2-212ENST00000497430 OSCARQ8IYS5 282 aa19.83■□□□□ 0.77
RFC2-212ENST00000497430 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
RFC2-212ENST00000497430 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
RFC2-212ENST00000497430 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
RFC2-212ENST00000497430 DNMBPQ6XZF7 1577 aa19.73■□□□□ 0.75
RFC2-212ENST00000497430 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
RFC2-212ENST00000497430 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
RFC2-212ENST00000497430 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
RFC2-212ENST00000497430 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.737e-8■■■■□ 21.1
RFC2-212ENST00000497430 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
RFC2-212ENST00000497430 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
RFC2-212ENST00000497430 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
RFC2-212ENST00000497430 POLA1P09884 1462 aaPredicted RBP19.62■□□□□ 0.73
RFC2-212ENST00000497430 CHD1O14646 1710 aa19.58■□□□□ 0.72
RFC2-212ENST00000497430 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.72
RFC2-212ENST00000497430 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
RFC2-212ENST00000497430 SOGA1O94964 1423 aa19.51■□□□□ 0.71
RFC2-212ENST00000497430 CUX1P39880 1505 aa19.51■□□□□ 0.71
RFC2-212ENST00000497430 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
RFC2-212ENST00000497430 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
RFC2-212ENST00000497430 FBLN2P98095 1184 aa19.42■□□□□ 0.7
RFC2-212ENST00000497430 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
RFC2-212ENST00000497430 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
RFC2-212ENST00000497430 CYB5RLQ6IPT4 315 aa19.39■□□□□ 0.69
RFC2-212ENST00000497430 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
RFC2-212ENST00000497430 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
RFC2-212ENST00000497430 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
RFC2-212ENST00000497430 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
RFC2-212ENST00000497430 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
RFC2-212ENST00000497430 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
RFC2-212ENST00000497430 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
RFC2-212ENST00000497430 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
RFC2-212ENST00000497430 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
RFC2-212ENST00000497430 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
RFC2-212ENST00000497430 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
RFC2-212ENST00000497430 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
RFC2-212ENST00000497430 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
RFC2-212ENST00000497430 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
RFC2-212ENST00000497430 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
RFC2-212ENST00000497430 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
RFC2-212ENST00000497430 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
RFC2-212ENST00000497430 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
RFC2-212ENST00000497430 ERCC6L2Q5T890 1561 aa19.08■□□□□ 0.65
RFC2-212ENST00000497430 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
RFC2-212ENST00000497430 NUP160Q12769 1436 aa19.05■□□□□ 0.64
RFC2-212ENST00000497430 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
RFC2-212ENST00000497430 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
RFC2-212ENST00000497430 SHROOM2Q13796 1616 aa19■□□□□ 0.63
RFC2-212ENST00000497430 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
RFC2-212ENST00000497430 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
RFC2-212ENST00000497430 IGF1RP08069 1367 aa18.82■□□□□ 0.6
RFC2-212ENST00000497430 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms