RNA–Protein interactions for RNA: ENST00000497423.1

LCLAT1-212, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-212ENST00000497423 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
LCLAT1-212ENST00000497423 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
LCLAT1-212ENST00000497423 ABCC9O60706 1549 aa29.74■■■□□ 2.35
LCLAT1-212ENST00000497423 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
LCLAT1-212ENST00000497423 NACADO15069 1562 aa28.5■■■□□ 2.15
LCLAT1-212ENST00000497423 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
LCLAT1-212ENST00000497423 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
LCLAT1-212ENST00000497423 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
LCLAT1-212ENST00000497423 DCAF1Q9Y4B6 1507 aa28.1■■■□□ 2.09
LCLAT1-212ENST00000497423 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
LCLAT1-212ENST00000497423 PABPN1Q86U42 306 aaKnown RBP eCLIP27.78■■■□□ 2.04
LCLAT1-212ENST00000497423 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
LCLAT1-212ENST00000497423 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
LCLAT1-212ENST00000497423 SCRIBQ14160 1630 aa27.52■■■□□ 2
LCLAT1-212ENST00000497423 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
LCLAT1-212ENST00000497423 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
LCLAT1-212ENST00000497423 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
LCLAT1-212ENST00000497423 CECR2Q9BXF3 1484 aa26.76■■□□□ 1.87
LCLAT1-212ENST00000497423 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
LCLAT1-212ENST00000497423 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
LCLAT1-212ENST00000497423 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
LCLAT1-212ENST00000497423 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
LCLAT1-212ENST00000497423 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
LCLAT1-212ENST00000497423 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
LCLAT1-212ENST00000497423 HMGXB3Q12766 1538 aa26.14■■□□□ 1.77
LCLAT1-212ENST00000497423 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
LCLAT1-212ENST00000497423 BAZ1BQ9UIG0 1483 aaKnown RBP26.02■■□□□ 1.76
LCLAT1-212ENST00000497423 WIZO95785 1651 aa25.83■■□□□ 1.73
LCLAT1-212ENST00000497423 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
LCLAT1-212ENST00000497423 NESP48681 1621 aa25.69■■□□□ 1.7
LCLAT1-212ENST00000497423 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
LCLAT1-212ENST00000497423 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
LCLAT1-212ENST00000497423 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
LCLAT1-212ENST00000497423 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
LCLAT1-212ENST00000497423 CUX2O14529 1486 aa25.49■■□□□ 1.67
LCLAT1-212ENST00000497423 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
LCLAT1-212ENST00000497423 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
LCLAT1-212ENST00000497423 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
LCLAT1-212ENST00000497423 CFTRP13569 1480 aa25.34■■□□□ 1.65
LCLAT1-212ENST00000497423 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
LCLAT1-212ENST00000497423 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
LCLAT1-212ENST00000497423 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
LCLAT1-212ENST00000497423 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
LCLAT1-212ENST00000497423 DNAJC5Q9H3Z4 198 aa25.15■■□□□ 1.62
LCLAT1-212ENST00000497423 WDR62O43379 1518 aa25.12■■□□□ 1.61
LCLAT1-212ENST00000497423 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
LCLAT1-212ENST00000497423 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
LCLAT1-212ENST00000497423 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
LCLAT1-212ENST00000497423 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
LCLAT1-212ENST00000497423 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
LCLAT1-212ENST00000497423 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
LCLAT1-212ENST00000497423 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
LCLAT1-212ENST00000497423 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
LCLAT1-212ENST00000497423 POLA1P09884 1462 aaPredicted RBP24.56■■□□□ 1.52
LCLAT1-212ENST00000497423 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
LCLAT1-212ENST00000497423 CUX1P39880 1505 aa24.51■■□□□ 1.51
LCLAT1-212ENST00000497423 SOGA1O94964 1423 aa24.47■■□□□ 1.51
LCLAT1-212ENST00000497423 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
LCLAT1-212ENST00000497423 EIF4G3O43432 1585 aaKnown RBP24.45■■□□□ 1.5
LCLAT1-212ENST00000497423 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
LCLAT1-212ENST00000497423 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
LCLAT1-212ENST00000497423 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
LCLAT1-212ENST00000497423 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
LCLAT1-212ENST00000497423 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
LCLAT1-212ENST00000497423 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
LCLAT1-212ENST00000497423 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
LCLAT1-212ENST00000497423 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
LCLAT1-212ENST00000497423 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
LCLAT1-212ENST00000497423 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LCLAT1-212ENST00000497423 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
LCLAT1-212ENST00000497423 CHD1O14646 1710 aa24.18■■□□□ 1.46
LCLAT1-212ENST00000497423 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
LCLAT1-212ENST00000497423 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
LCLAT1-212ENST00000497423 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
LCLAT1-212ENST00000497423 ABCA5Q8WWZ7 1642 aa24.14■■□□□ 1.46
LCLAT1-212ENST00000497423 FBLN2P98095 1184 aa24.14■■□□□ 1.45
LCLAT1-212ENST00000497423 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
LCLAT1-212ENST00000497423 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
LCLAT1-212ENST00000497423 CHMP7Q8WUX9 453 aaPredicted RBP24.08■■□□□ 1.45
LCLAT1-212ENST00000497423 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
LCLAT1-212ENST00000497423 RIMBP3CA6NJZ7 1639 aa24.01■■□□□ 1.43
LCLAT1-212ENST00000497423 RIMBP3BA6NNM3 1639 aa24.01■■□□□ 1.43
LCLAT1-212ENST00000497423 RIMBP3Q9UFD9 1639 aa24.01■■□□□ 1.43
LCLAT1-212ENST00000497423 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
LCLAT1-212ENST00000497423 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
LCLAT1-212ENST00000497423 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
LCLAT1-212ENST00000497423 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
LCLAT1-212ENST00000497423 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
LCLAT1-212ENST00000497423 GRIN2AQ12879 1464 aa23.88■■□□□ 1.41
LCLAT1-212ENST00000497423 NUP160Q12769 1436 aa23.8■■□□□ 1.4
LCLAT1-212ENST00000497423 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
LCLAT1-212ENST00000497423 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
LCLAT1-212ENST00000497423 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
LCLAT1-212ENST00000497423 IGF1RP08069 1367 aa23.77■■□□□ 1.4
LCLAT1-212ENST00000497423 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
LCLAT1-212ENST00000497423 CUL7Q14999 1698 aa23.67■■□□□ 1.38
LCLAT1-212ENST00000497423 SHROOM2Q13796 1616 aa23.64■■□□□ 1.38
LCLAT1-212ENST00000497423 CARMIL1Q5VZK9 1371 aa23.6■■□□□ 1.37
LCLAT1-212ENST00000497423 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
LCLAT1-212ENST00000497423 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms