RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 NISCHQ9Y2I1 1504 aa39.88■■■■□ 3.97
HCLS1-212ENST00000497391 CCDC180Q9P1Z9 1646 aa35.53■■■■□ 3.28
HCLS1-212ENST00000497391 ABCC9O60706 1549 aa34.76■■■■□ 3.16
HCLS1-212ENST00000497391 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
HCLS1-212ENST00000497391 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
HCLS1-212ENST00000497391 NACADO15069 1562 aa33.43■■■□□ 2.94
HCLS1-212ENST00000497391 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
HCLS1-212ENST00000497391 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
HCLS1-212ENST00000497391 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
HCLS1-212ENST00000497391 UNC13AQ9UPW8 1703 aa32.56■■■□□ 2.8
HCLS1-212ENST00000497391 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
HCLS1-212ENST00000497391 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
HCLS1-212ENST00000497391 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.76
HCLS1-212ENST00000497391 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
HCLS1-212ENST00000497391 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
HCLS1-212ENST00000497391 EIF4G1Q04637 1599 aaKnown RBP31.56■■■□□ 2.64
HCLS1-212ENST00000497391 CC2D2AQ9P2K1 1620 aa31.42■■■□□ 2.62
HCLS1-212ENST00000497391 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
HCLS1-212ENST00000497391 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
HCLS1-212ENST00000497391 SMARCA4P51532 1647 aa30.97■■■□□ 2.55
HCLS1-212ENST00000497391 SMARCA2P51531 1590 aa30.85■■■□□ 2.53
HCLS1-212ENST00000497391 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
HCLS1-212ENST00000497391 ATAD2BQ9ULI0 1458 aa30.79■■■□□ 2.52
HCLS1-212ENST00000497391 MROH2BQ7Z745 1585 aa30.68■■■□□ 2.5
HCLS1-212ENST00000497391 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
HCLS1-212ENST00000497391 PEG3Q9GZU2 1588 aa30.65■■■□□ 2.5
HCLS1-212ENST00000497391 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
HCLS1-212ENST00000497391 WIZO95785 1651 aa30.36■■■□□ 2.45
HCLS1-212ENST00000497391 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
HCLS1-212ENST00000497391 TOP2AP11388 1531 aaKnown RBP30.12■■■□□ 2.41
HCLS1-212ENST00000497391 ERCC6Q03468 1493 aa30.1■■■□□ 2.41
HCLS1-212ENST00000497391 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
HCLS1-212ENST00000497391 NESP48681 1621 aa30■■■□□ 2.39
HCLS1-212ENST00000497391 CADPSQ9ULU8 1353 aa29.92■■■□□ 2.38
HCLS1-212ENST00000497391 PDS5BQ9NTI5 1447 aa29.89■■■□□ 2.38
HCLS1-212ENST00000497391 CUX2O14529 1486 aa29.74■■■□□ 2.35
HCLS1-212ENST00000497391 CFTRP13569 1480 aa29.71■■■□□ 2.35
HCLS1-212ENST00000497391 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
HCLS1-212ENST00000497391 KIF21AQ7Z4S6 1674 aa29.68■■■□□ 2.34
HCLS1-212ENST00000497391 SUPT5HO00267 1087 aaKnown RBP29.63■■■□□ 2.33
HCLS1-212ENST00000497391 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
HCLS1-212ENST00000497391 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
HCLS1-212ENST00000497391 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
HCLS1-212ENST00000497391 MRC2Q9UBG0 1479 aa29.55■■■□□ 2.32
HCLS1-212ENST00000497391 PRDM2Q13029 1718 aa29.5■■■□□ 2.31
HCLS1-212ENST00000497391 WDR62O43379 1518 aa29.4■■■□□ 2.3
HCLS1-212ENST00000497391 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
HCLS1-212ENST00000497391 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
HCLS1-212ENST00000497391 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
HCLS1-212ENST00000497391 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
HCLS1-212ENST00000497391 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
HCLS1-212ENST00000497391 POLA1P09884 1462 aaPredicted RBP28.83■■■□□ 2.21
HCLS1-212ENST00000497391 CUX1P39880 1505 aa28.81■■■□□ 2.2
HCLS1-212ENST00000497391 DNAJC5Q9H3Z4 198 aa28.79■■■□□ 2.2
HCLS1-212ENST00000497391 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
HCLS1-212ENST00000497391 SOGA1O94964 1423 aa28.75■■■□□ 2.19
HCLS1-212ENST00000497391 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
HCLS1-212ENST00000497391 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
HCLS1-212ENST00000497391 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
HCLS1-212ENST00000497391 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
HCLS1-212ENST00000497391 RAD54L2Q9Y4B4 1467 aa28.67■■■□□ 2.18
HCLS1-212ENST00000497391 WDR97A6NE52 1622 aa28.63■■■□□ 2.17
HCLS1-212ENST00000497391 TOP2BQ02880 1626 aa28.6■■■□□ 2.17
HCLS1-212ENST00000497391 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.17
HCLS1-212ENST00000497391 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
HCLS1-212ENST00000497391 TDRD9Q8NDG6 1382 aaKnown RBP28.56■■■□□ 2.16
HCLS1-212ENST00000497391 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
HCLS1-212ENST00000497391 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
HCLS1-212ENST00000497391 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
HCLS1-212ENST00000497391 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
HCLS1-212ENST00000497391 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
HCLS1-212ENST00000497391 MAGI1Q96QZ7 1491 aaPredicted RBP28.39■■■□□ 2.13
HCLS1-212ENST00000497391 FBLN2P98095 1184 aa28.38■■■□□ 2.13
HCLS1-212ENST00000497391 SNAPC4Q5SXM2 1469 aa28.38■■■□□ 2.13
HCLS1-212ENST00000497391 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
HCLS1-212ENST00000497391 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
HCLS1-212ENST00000497391 CHD1O14646 1710 aa28.3■■■□□ 2.12
HCLS1-212ENST00000497391 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
HCLS1-212ENST00000497391 SYNJ2O15056 1496 aa28.26■■■□□ 2.11
HCLS1-212ENST00000497391 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
HCLS1-212ENST00000497391 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
HCLS1-212ENST00000497391 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
HCLS1-212ENST00000497391 FHAD1B1AJZ9 1412 aa28.11■■■□□ 2.09
HCLS1-212ENST00000497391 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
HCLS1-212ENST00000497391 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
HCLS1-212ENST00000497391 ARHGEF11O15085 1522 aa27.98■■■□□ 2.07
HCLS1-212ENST00000497391 CLASP1Q7Z460 1538 aa27.98■■■□□ 2.07
HCLS1-212ENST00000497391 RIMBP3CA6NJZ7 1639 aa27.97■■■□□ 2.07
HCLS1-212ENST00000497391 RIMBP3BA6NNM3 1639 aa27.97■■■□□ 2.07
HCLS1-212ENST00000497391 RIMBP3Q9UFD9 1639 aa27.97■■■□□ 2.07
HCLS1-212ENST00000497391 CUL7Q14999 1698 aa27.95■■■□□ 2.07
HCLS1-212ENST00000497391 IGF1RP08069 1367 aa27.91■■■□□ 2.06
HCLS1-212ENST00000497391 NUP160Q12769 1436 aa27.89■■■□□ 2.06
HCLS1-212ENST00000497391 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
HCLS1-212ENST00000497391 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
HCLS1-212ENST00000497391 CYB5RLQ6IPT4 315 aa27.75■■■□□ 2.03
HCLS1-212ENST00000497391 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
HCLS1-212ENST00000497391 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
HCLS1-212ENST00000497391 SHROOM2Q13796 1616 aa27.67■■■□□ 2.02
HCLS1-212ENST00000497391 RAPGEF2Q9Y4G8 1499 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 445.2 ms