RNA–Protein interactions for RNA: ENST00000497388.5

CPA4-211, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-211ENST00000497388 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
CPA4-211ENST00000497388 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
CPA4-211ENST00000497388 ABCC9O60706 1549 aa22.35■■□□□ 1.17
CPA4-211ENST00000497388 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
CPA4-211ENST00000497388 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
CPA4-211ENST00000497388 NACADO15069 1562 aa21.19■□□□□ 0.98
CPA4-211ENST00000497388 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
CPA4-211ENST00000497388 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
CPA4-211ENST00000497388 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
CPA4-211ENST00000497388 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
CPA4-211ENST00000497388 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
CPA4-211ENST00000497388 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
CPA4-211ENST00000497388 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
CPA4-211ENST00000497388 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
CPA4-211ENST00000497388 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
CPA4-211ENST00000497388 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
CPA4-211ENST00000497388 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
CPA4-211ENST00000497388 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
CPA4-211ENST00000497388 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
CPA4-211ENST00000497388 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
CPA4-211ENST00000497388 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
CPA4-211ENST00000497388 NCAPD3P42695 1498 aa19.57■□□□□ 0.72
CPA4-211ENST00000497388 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
CPA4-211ENST00000497388 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
CPA4-211ENST00000497388 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
CPA4-211ENST00000497388 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
CPA4-211ENST00000497388 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
CPA4-211ENST00000497388 WIZO95785 1651 aa19.37■□□□□ 0.69
CPA4-211ENST00000497388 NESP48681 1621 aa19.3■□□□□ 0.68
CPA4-211ENST00000497388 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
CPA4-211ENST00000497388 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
CPA4-211ENST00000497388 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.65
CPA4-211ENST00000497388 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
CPA4-211ENST00000497388 KIF21AQ7Z4S6 1674 aa19.04■□□□□ 0.64
CPA4-211ENST00000497388 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
CPA4-211ENST00000497388 CUX2O14529 1486 aa18.97■□□□□ 0.63
CPA4-211ENST00000497388 PDS5BQ9NTI5 1447 aa18.97■□□□□ 0.63
CPA4-211ENST00000497388 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
CPA4-211ENST00000497388 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
CPA4-211ENST00000497388 CFTRP13569 1480 aa18.87■□□□□ 0.61
CPA4-211ENST00000497388 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
CPA4-211ENST00000497388 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
CPA4-211ENST00000497388 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.6
CPA4-211ENST00000497388 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
CPA4-211ENST00000497388 WDR62O43379 1518 aa18.75■□□□□ 0.59
CPA4-211ENST00000497388 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
CPA4-211ENST00000497388 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
CPA4-211ENST00000497388 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
CPA4-211ENST00000497388 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
CPA4-211ENST00000497388 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
CPA4-211ENST00000497388 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
CPA4-211ENST00000497388 IFT140Q96RY7 1462 aa18.4■□□□□ 0.54
CPA4-211ENST00000497388 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
CPA4-211ENST00000497388 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
CPA4-211ENST00000497388 CUX1P39880 1505 aa18.36■□□□□ 0.53
CPA4-211ENST00000497388 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
CPA4-211ENST00000497388 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.52
CPA4-211ENST00000497388 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
CPA4-211ENST00000497388 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
CPA4-211ENST00000497388 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.52
CPA4-211ENST00000497388 SOGA1O94964 1423 aa18.29■□□□□ 0.52
CPA4-211ENST00000497388 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
CPA4-211ENST00000497388 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
CPA4-211ENST00000497388 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
CPA4-211ENST00000497388 FBLN2P98095 1184 aa18.17■□□□□ 0.5
CPA4-211ENST00000497388 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
CPA4-211ENST00000497388 CHD1O14646 1710 aa18.15■□□□□ 0.5
CPA4-211ENST00000497388 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
CPA4-211ENST00000497388 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
CPA4-211ENST00000497388 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
CPA4-211ENST00000497388 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
CPA4-211ENST00000497388 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
CPA4-211ENST00000497388 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
CPA4-211ENST00000497388 GRIN2BQ13224 1484 aa18.06■□□□□ 0.48
CPA4-211ENST00000497388 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
CPA4-211ENST00000497388 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
CPA4-211ENST00000497388 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
CPA4-211ENST00000497388 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
CPA4-211ENST00000497388 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
CPA4-211ENST00000497388 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
CPA4-211ENST00000497388 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
CPA4-211ENST00000497388 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
CPA4-211ENST00000497388 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
CPA4-211ENST00000497388 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
CPA4-211ENST00000497388 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
CPA4-211ENST00000497388 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
CPA4-211ENST00000497388 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
CPA4-211ENST00000497388 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
CPA4-211ENST00000497388 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
CPA4-211ENST00000497388 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
CPA4-211ENST00000497388 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
CPA4-211ENST00000497388 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
CPA4-211ENST00000497388 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
CPA4-211ENST00000497388 NUP160Q12769 1436 aa17.74■□□□□ 0.43
CPA4-211ENST00000497388 IGF1RP08069 1367 aa17.73■□□□□ 0.43
CPA4-211ENST00000497388 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
CPA4-211ENST00000497388 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
CPA4-211ENST00000497388 CUL7Q14999 1698 aa17.65■□□□□ 0.42
CPA4-211ENST00000497388 SHROOM2Q13796 1616 aa17.63■□□□□ 0.41
CPA4-211ENST00000497388 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms