RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 NISCHQ9Y2I1 1504 aa39.12■■■■□ 3.85
COL1A2-212ENST00000497316 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
COL1A2-212ENST00000497316 ABCC9O60706 1549 aa33.99■■■■□ 3.03
COL1A2-212ENST00000497316 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.84
COL1A2-212ENST00000497316 NACADO15069 1562 aa32.74■■■□□ 2.83
COL1A2-212ENST00000497316 MYO15BQ96JP2 1530 aa32.6■■■□□ 2.81
COL1A2-212ENST00000497316 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
COL1A2-212ENST00000497316 ZCCHC6Q5VYS8 1495 aaKnown RBP32.58■■■□□ 2.81
COL1A2-212ENST00000497316 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
COL1A2-212ENST00000497316 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
COL1A2-212ENST00000497316 BICRAQ9NZM4 1560 aa31.75■■■□□ 2.67
COL1A2-212ENST00000497316 PABPN1Q86U42 306 aaKnown RBP eCLIP31.74■■■□□ 2.67
COL1A2-212ENST00000497316 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
COL1A2-212ENST00000497316 DNAJC5BQ9UF47 199 aa31.61■■■□□ 2.65
COL1A2-212ENST00000497316 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
COL1A2-212ENST00000497316 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
COL1A2-212ENST00000497316 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
COL1A2-212ENST00000497316 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
COL1A2-212ENST00000497316 SMARCA4P51532 1647 aa30.34■■■□□ 2.45
COL1A2-212ENST00000497316 BAZ1AQ9NRL2 1556 aaPredicted RBP30.33■■■□□ 2.45
COL1A2-212ENST00000497316 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
COL1A2-212ENST00000497316 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
COL1A2-212ENST00000497316 SMARCA2P51531 1590 aa30.17■■■□□ 2.42
COL1A2-212ENST00000497316 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
COL1A2-212ENST00000497316 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
COL1A2-212ENST00000497316 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
COL1A2-212ENST00000497316 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
COL1A2-212ENST00000497316 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
COL1A2-212ENST00000497316 WIZO95785 1651 aa29.77■■■□□ 2.36
COL1A2-212ENST00000497316 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
COL1A2-212ENST00000497316 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
COL1A2-212ENST00000497316 LAMC3Q9Y6N6 1575 aa29.41■■■□□ 2.3
COL1A2-212ENST00000497316 NESP48681 1621 aa29.41■■■□□ 2.3
COL1A2-212ENST00000497316 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
COL1A2-212ENST00000497316 CUX2O14529 1486 aa29.27■■■□□ 2.28
COL1A2-212ENST00000497316 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.27
COL1A2-212ENST00000497316 CFTRP13569 1480 aa29.14■■■□□ 2.26
COL1A2-212ENST00000497316 CCDC88BA6NC98 1476 aa29.13■■■□□ 2.25
COL1A2-212ENST00000497316 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
COL1A2-212ENST00000497316 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
COL1A2-212ENST00000497316 THOC2Q8NI27 1593 aaKnown RBP29.01■■■□□ 2.23
COL1A2-212ENST00000497316 FANCD2Q9BXW9 1451 aa28.95■■■□□ 2.22
COL1A2-212ENST00000497316 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
COL1A2-212ENST00000497316 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
COL1A2-212ENST00000497316 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
COL1A2-212ENST00000497316 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
COL1A2-212ENST00000497316 WDR62O43379 1518 aa28.8■■■□□ 2.2
COL1A2-212ENST00000497316 URB2Q14146 1524 aaKnown RBP28.65■■■□□ 2.18
COL1A2-212ENST00000497316 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
COL1A2-212ENST00000497316 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
COL1A2-212ENST00000497316 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
COL1A2-212ENST00000497316 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
COL1A2-212ENST00000497316 CUX1P39880 1505 aa28.25■■■□□ 2.11
COL1A2-212ENST00000497316 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
COL1A2-212ENST00000497316 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
COL1A2-212ENST00000497316 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
COL1A2-212ENST00000497316 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
COL1A2-212ENST00000497316 SOGA1O94964 1423 aa28.13■■■□□ 2.09
COL1A2-212ENST00000497316 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
COL1A2-212ENST00000497316 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
COL1A2-212ENST00000497316 EIF4G3O43432 1585 aaKnown RBP28.06■■■□□ 2.08
COL1A2-212ENST00000497316 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
COL1A2-212ENST00000497316 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
COL1A2-212ENST00000497316 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
COL1A2-212ENST00000497316 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.07
COL1A2-212ENST00000497316 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
COL1A2-212ENST00000497316 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
COL1A2-212ENST00000497316 TDRD9Q8NDG6 1382 aaKnown RBP27.95■■■□□ 2.06
COL1A2-212ENST00000497316 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
COL1A2-212ENST00000497316 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
COL1A2-212ENST00000497316 GRIN2BQ13224 1484 aa27.82■■■□□ 2.04
COL1A2-212ENST00000497316 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
COL1A2-212ENST00000497316 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
COL1A2-212ENST00000497316 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
COL1A2-212ENST00000497316 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
COL1A2-212ENST00000497316 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
COL1A2-212ENST00000497316 CHD1O14646 1710 aa27.7■■■□□ 2.03
COL1A2-212ENST00000497316 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
COL1A2-212ENST00000497316 FBLN2P98095 1184 aa27.63■■■□□ 2.01
COL1A2-212ENST00000497316 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
COL1A2-212ENST00000497316 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
COL1A2-212ENST00000497316 RIMBP3CA6NJZ7 1639 aa27.52■■■□□ 2
COL1A2-212ENST00000497316 RIMBP3BA6NNM3 1639 aa27.52■■■□□ 2
COL1A2-212ENST00000497316 RIMBP3Q9UFD9 1639 aa27.52■■■□□ 2
COL1A2-212ENST00000497316 ADAMTS12P58397 1594 aa27.52■■■□□ 2
COL1A2-212ENST00000497316 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
COL1A2-212ENST00000497316 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
COL1A2-212ENST00000497316 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
COL1A2-212ENST00000497316 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
COL1A2-212ENST00000497316 CLASP1Q7Z460 1538 aa27.44■■□□□ 1.98
COL1A2-212ENST00000497316 IGF1RP08069 1367 aa27.39■■□□□ 1.98
COL1A2-212ENST00000497316 NUP160Q12769 1436 aa27.35■■□□□ 1.97
COL1A2-212ENST00000497316 CUL7Q14999 1698 aa27.33■■□□□ 1.97
COL1A2-212ENST00000497316 CYB5RLQ6IPT4 315 aa27.29■■□□□ 1.96
COL1A2-212ENST00000497316 CEP170Q5SW79 1584 aa27.29■■□□□ 1.96
COL1A2-212ENST00000497316 CARMIL1Q5VZK9 1371 aa27.22■■□□□ 1.95
COL1A2-212ENST00000497316 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.94
COL1A2-212ENST00000497316 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
COL1A2-212ENST00000497316 SHROOM2Q13796 1616 aa27.15■■□□□ 1.94
COL1A2-212ENST00000497316 KIAA0586Q9BVV6 1533 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms