RNA–Protein interactions for RNA: ENST00000497266.5

TFAP2A-218, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-218ENST00000497266 NISCHQ9Y2I1 1504 aa43.59■■■■■ 4.57
TFAP2A-218ENST00000497266 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
TFAP2A-218ENST00000497266 ABCC9O60706 1549 aa38.14■■■■□ 3.7
TFAP2A-218ENST00000497266 DCAF8L2P0C7V8 631 aa36.75■■■■□ 3.47
TFAP2A-218ENST00000497266 RB1CC1Q8TDY2 1594 aa36.51■■■■□ 3.44
TFAP2A-218ENST00000497266 NACADO15069 1562 aa36.42■■■■□ 3.42
TFAP2A-218ENST00000497266 ZCCHC6Q5VYS8 1495 aaKnown RBP36.27■■■■□ 3.4
TFAP2A-218ENST00000497266 MYO15BQ96JP2 1530 aa36.08■■■■□ 3.37
TFAP2A-218ENST00000497266 DCAF1Q9Y4B6 1507 aa35.94■■■■□ 3.34
TFAP2A-218ENST00000497266 PABPN1Q86U42 306 aaKnown RBP eCLIP35.72■■■■□ 3.31
TFAP2A-218ENST00000497266 UNC13AQ9UPW8 1703 aa35.67■■■■□ 3.3
TFAP2A-218ENST00000497266 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
TFAP2A-218ENST00000497266 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
TFAP2A-218ENST00000497266 DNAJC5BQ9UF47 199 aa35.12■■■■□ 3.21
TFAP2A-218ENST00000497266 SHROOM4Q9ULL8 1493 aa34.89■■■■□ 3.18
TFAP2A-218ENST00000497266 EIF4G1Q04637 1599 aaKnown RBP34.5■■■■□ 3.11
TFAP2A-218ENST00000497266 CC2D2AQ9P2K1 1620 aa34.41■■■■□ 3.1
TFAP2A-218ENST00000497266 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
TFAP2A-218ENST00000497266 SMARCA4P51532 1647 aa33.82■■■■□ 3.01
TFAP2A-218ENST00000497266 BAZ1AQ9NRL2 1556 aaPredicted RBP33.76■■■□□ 2.99
TFAP2A-218ENST00000497266 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
TFAP2A-218ENST00000497266 MROH2BQ7Z745 1585 aa33.64■■■□□ 2.98
TFAP2A-218ENST00000497266 NCAPD3P42695 1498 aa33.64■■■□□ 2.98
TFAP2A-218ENST00000497266 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
TFAP2A-218ENST00000497266 BAZ1BQ9UIG0 1483 aaKnown RBP33.43■■■□□ 2.94
TFAP2A-218ENST00000497266 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
TFAP2A-218ENST00000497266 PEG3Q9GZU2 1588 aa33.41■■■□□ 2.94
TFAP2A-218ENST00000497266 WIZO95785 1651 aa33.29■■■□□ 2.92
TFAP2A-218ENST00000497266 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
TFAP2A-218ENST00000497266 NESP48681 1621 aa32.98■■■□□ 2.87
TFAP2A-218ENST00000497266 TOP2AP11388 1531 aaKnown RBP32.86■■■□□ 2.85
TFAP2A-218ENST00000497266 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
TFAP2A-218ENST00000497266 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
TFAP2A-218ENST00000497266 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
TFAP2A-218ENST00000497266 PDS5BQ9NTI5 1447 aa32.59■■■□□ 2.81
TFAP2A-218ENST00000497266 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
TFAP2A-218ENST00000497266 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
TFAP2A-218ENST00000497266 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
TFAP2A-218ENST00000497266 CFTRP13569 1480 aa32.46■■■□□ 2.79
TFAP2A-218ENST00000497266 CUX2O14529 1486 aa32.41■■■□□ 2.78
TFAP2A-218ENST00000497266 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
TFAP2A-218ENST00000497266 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
TFAP2A-218ENST00000497266 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
TFAP2A-218ENST00000497266 MRC2Q9UBG0 1479 aa32.25■■■□□ 2.75
TFAP2A-218ENST00000497266 PRDM2Q13029 1718 aa32.12■■■□□ 2.73
TFAP2A-218ENST00000497266 WDR62O43379 1518 aa32.1■■■□□ 2.73
TFAP2A-218ENST00000497266 URB2Q14146 1524 aaKnown RBP32.03■■■□□ 2.72
TFAP2A-218ENST00000497266 TOPBP1Q92547 1522 aa31.81■■■□□ 2.68
TFAP2A-218ENST00000497266 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
TFAP2A-218ENST00000497266 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
TFAP2A-218ENST00000497266 DNAJC5Q9H3Z4 198 aa31.61■■■□□ 2.65
TFAP2A-218ENST00000497266 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
TFAP2A-218ENST00000497266 CUX1P39880 1505 aa31.56■■■□□ 2.64
TFAP2A-218ENST00000497266 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
TFAP2A-218ENST00000497266 POLA1P09884 1462 aaPredicted RBP31.53■■■□□ 2.64
TFAP2A-218ENST00000497266 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
TFAP2A-218ENST00000497266 FGD5Q6ZNL6 1462 aa31.47■■■□□ 2.63
TFAP2A-218ENST00000497266 SOGA1O94964 1423 aa31.46■■■□□ 2.63
TFAP2A-218ENST00000497266 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
TFAP2A-218ENST00000497266 AQRO60306 1485 aaKnown RBP eCLIP31.39■■■□□ 2.62
TFAP2A-218ENST00000497266 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
TFAP2A-218ENST00000497266 WRNQ14191 1432 aaPredicted RBP eCLIP31.33■■■□□ 2.61
TFAP2A-218ENST00000497266 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
TFAP2A-218ENST00000497266 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
TFAP2A-218ENST00000497266 TOP2BQ02880 1626 aa31.21■■■□□ 2.59
TFAP2A-218ENST00000497266 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
TFAP2A-218ENST00000497266 BIVM-ERCC5R4GMW8 1640 aa31.18■■■□□ 2.58
TFAP2A-218ENST00000497266 FBLN2P98095 1184 aa31.13■■■□□ 2.57
TFAP2A-218ENST00000497266 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
TFAP2A-218ENST00000497266 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
TFAP2A-218ENST00000497266 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
TFAP2A-218ENST00000497266 SNAPC4Q5SXM2 1469 aa31.05■■■□□ 2.56
TFAP2A-218ENST00000497266 GRIN2BQ13224 1484 aa31.04■■■□□ 2.56
TFAP2A-218ENST00000497266 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
TFAP2A-218ENST00000497266 CHD1O14646 1710 aa30.96■■■□□ 2.55
TFAP2A-218ENST00000497266 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
TFAP2A-218ENST00000497266 PBRM1Q86U86 1689 aa30.94■■■□□ 2.54
TFAP2A-218ENST00000497266 MAGI1Q96QZ7 1491 aaPredicted RBP30.93■■■□□ 2.54
TFAP2A-218ENST00000497266 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
TFAP2A-218ENST00000497266 TRIM41Q8WV44 630 aa30.71■■■□□ 2.51
TFAP2A-218ENST00000497266 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
TFAP2A-218ENST00000497266 ADAMTS12P58397 1594 aa30.7■■■□□ 2.5
TFAP2A-218ENST00000497266 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
TFAP2A-218ENST00000497266 FHAD1B1AJZ9 1412 aa30.67■■■□□ 2.5
TFAP2A-218ENST00000497266 GRIN2AQ12879 1464 aa30.64■■■□□ 2.5
TFAP2A-218ENST00000497266 RIMBP3CA6NJZ7 1639 aa30.63■■■□□ 2.49
TFAP2A-218ENST00000497266 RIMBP3BA6NNM3 1639 aa30.63■■■□□ 2.49
TFAP2A-218ENST00000497266 RIMBP3Q9UFD9 1639 aa30.63■■■□□ 2.49
TFAP2A-218ENST00000497266 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
TFAP2A-218ENST00000497266 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
TFAP2A-218ENST00000497266 IGF1RP08069 1367 aa30.59■■■□□ 2.49
TFAP2A-218ENST00000497266 CEP170Q5SW79 1584 aa30.5■■■□□ 2.47
TFAP2A-218ENST00000497266 CHIC1Q5VXU3 224 aa30.49■■■□□ 2.47
TFAP2A-218ENST00000497266 CYB5RLQ6IPT4 315 aa30.49■■■□□ 2.47
TFAP2A-218ENST00000497266 NUP160Q12769 1436 aa30.47■■■□□ 2.47
TFAP2A-218ENST00000497266 RUSC2Q8N2Y8 1516 aa30.47■■■□□ 2.47
TFAP2A-218ENST00000497266 CARMIL1Q5VZK9 1371 aa30.42■■■□□ 2.46
TFAP2A-218ENST00000497266 CUL7Q14999 1698 aa30.4■■■□□ 2.46
TFAP2A-218ENST00000497266 ARAP1Q96P48 1450 aa30.38■■■□□ 2.45
TFAP2A-218ENST00000497266 JPH4Q96JJ6 628 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms