RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
SPTAN1-209ENST00000497216 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
SPTAN1-209ENST00000497216 ABCC9O60706 1549 aa30.78■■■□□ 2.52
SPTAN1-209ENST00000497216 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
SPTAN1-209ENST00000497216 NACADO15069 1562 aa29.17■■■□□ 2.26
SPTAN1-209ENST00000497216 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
SPTAN1-209ENST00000497216 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
SPTAN1-209ENST00000497216 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
SPTAN1-209ENST00000497216 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
SPTAN1-209ENST00000497216 PABPN1Q86U42 306 aaKnown RBP eCLIP28.56■■■□□ 2.16
SPTAN1-209ENST00000497216 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
SPTAN1-209ENST00000497216 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
SPTAN1-209ENST00000497216 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
SPTAN1-209ENST00000497216 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
SPTAN1-209ENST00000497216 SCRIBQ14160 1630 aa28.02■■■□□ 2.08
SPTAN1-209ENST00000497216 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.05
SPTAN1-209ENST00000497216 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
SPTAN1-209ENST00000497216 CECR2Q9BXF3 1484 aa27.77■■■□□ 2.04
SPTAN1-209ENST00000497216 NCAPD3P42695 1498 aa26.89■■□□□ 1.9
SPTAN1-209ENST00000497216 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
SPTAN1-209ENST00000497216 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
SPTAN1-209ENST00000497216 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
SPTAN1-209ENST00000497216 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
SPTAN1-209ENST00000497216 CUX2O14529 1486 aa26.67■■□□□ 1.86
SPTAN1-209ENST00000497216 DNAJC5Q9H3Z4 198 aa26.66■■□□□ 1.86
SPTAN1-209ENST00000497216 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
SPTAN1-209ENST00000497216 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
SPTAN1-209ENST00000497216 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
SPTAN1-209ENST00000497216 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
SPTAN1-209ENST00000497216 NESP48681 1621 aa26.43■■□□□ 1.82
SPTAN1-209ENST00000497216 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SPTAN1-209ENST00000497216 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
SPTAN1-209ENST00000497216 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
SPTAN1-209ENST00000497216 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
SPTAN1-209ENST00000497216 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
SPTAN1-209ENST00000497216 WIZO95785 1651 aa26.07■■□□□ 1.76
SPTAN1-209ENST00000497216 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
SPTAN1-209ENST00000497216 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
SPTAN1-209ENST00000497216 WDR62O43379 1518 aa25.9■■□□□ 1.74
SPTAN1-209ENST00000497216 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
SPTAN1-209ENST00000497216 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
SPTAN1-209ENST00000497216 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
SPTAN1-209ENST00000497216 CFTRP13569 1480 aa25.75■■□□□ 1.71
SPTAN1-209ENST00000497216 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
SPTAN1-209ENST00000497216 PRDM2Q13029 1718 aa25.64■■□□□ 1.7
SPTAN1-209ENST00000497216 URB2Q14146 1524 aaKnown RBP25.55■■□□□ 1.68
SPTAN1-209ENST00000497216 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
SPTAN1-209ENST00000497216 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
SPTAN1-209ENST00000497216 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
SPTAN1-209ENST00000497216 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
SPTAN1-209ENST00000497216 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
SPTAN1-209ENST00000497216 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
SPTAN1-209ENST00000497216 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
SPTAN1-209ENST00000497216 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
SPTAN1-209ENST00000497216 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.62
SPTAN1-209ENST00000497216 RIMBP3CA6NJZ7 1639 aa25.11■■□□□ 1.61
SPTAN1-209ENST00000497216 RIMBP3BA6NNM3 1639 aa25.11■■□□□ 1.61
SPTAN1-209ENST00000497216 RIMBP3Q9UFD9 1639 aa25.11■■□□□ 1.61
SPTAN1-209ENST00000497216 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
SPTAN1-209ENST00000497216 CHD1O14646 1710 aa25■■□□□ 1.59
SPTAN1-209ENST00000497216 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
SPTAN1-209ENST00000497216 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
SPTAN1-209ENST00000497216 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
SPTAN1-209ENST00000497216 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
SPTAN1-209ENST00000497216 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
SPTAN1-209ENST00000497216 SOGA1O94964 1423 aa24.83■■□□□ 1.57
SPTAN1-209ENST00000497216 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
SPTAN1-209ENST00000497216 CUX1P39880 1505 aa24.79■■□□□ 1.56
SPTAN1-209ENST00000497216 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
SPTAN1-209ENST00000497216 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
SPTAN1-209ENST00000497216 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
SPTAN1-209ENST00000497216 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
SPTAN1-209ENST00000497216 FBLN2P98095 1184 aa24.71■■□□□ 1.55
SPTAN1-209ENST00000497216 CLASP1Q7Z460 1538 aa24.7■■□□□ 1.54
SPTAN1-209ENST00000497216 CYB5RLQ6IPT4 315 aa24.69■■□□□ 1.54
SPTAN1-209ENST00000497216 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
SPTAN1-209ENST00000497216 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
SPTAN1-209ENST00000497216 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
SPTAN1-209ENST00000497216 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
SPTAN1-209ENST00000497216 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
SPTAN1-209ENST00000497216 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
SPTAN1-209ENST00000497216 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
SPTAN1-209ENST00000497216 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
SPTAN1-209ENST00000497216 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
SPTAN1-209ENST00000497216 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
SPTAN1-209ENST00000497216 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
SPTAN1-209ENST00000497216 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
SPTAN1-209ENST00000497216 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
SPTAN1-209ENST00000497216 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
SPTAN1-209ENST00000497216 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
SPTAN1-209ENST00000497216 NUP160Q12769 1436 aa24.3■■□□□ 1.48
SPTAN1-209ENST00000497216 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
SPTAN1-209ENST00000497216 ERICH3Q5RHP9 1530 aa24.27■■□□□ 1.48
SPTAN1-209ENST00000497216 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
SPTAN1-209ENST00000497216 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
SPTAN1-209ENST00000497216 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
SPTAN1-209ENST00000497216 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
SPTAN1-209ENST00000497216 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
SPTAN1-209ENST00000497216 KIF13AQ9H1H9 1805 aa24■■□□□ 1.43
SPTAN1-209ENST00000497216 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms