RNA–Protein interactions for RNA: ENST00000497153.5

FGD4-209, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 4

Gene FGD4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-209ENST00000497153 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
FGD4-209ENST00000497153 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
FGD4-209ENST00000497153 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
FGD4-209ENST00000497153 CHIC1Q5VXU3 224 aa14.01□□□□□ -0.17
FGD4-209ENST00000497153 ABCC9O60706 1549 aa13.82□□□□□ -0.2
FGD4-209ENST00000497153 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
FGD4-209ENST00000497153 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
FGD4-209ENST00000497153 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
FGD4-209ENST00000497153 NACADO15069 1562 aa13.45□□□□□ -0.26
FGD4-209ENST00000497153 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
FGD4-209ENST00000497153 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
FGD4-209ENST00000497153 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
FGD4-209ENST00000497153 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
FGD4-209ENST00000497153 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
FGD4-209ENST00000497153 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
FGD4-209ENST00000497153 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
FGD4-209ENST00000497153 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
FGD4-209ENST00000497153 SMARCA4P51532 1647 aa12.65□□□□□ -0.38
FGD4-209ENST00000497153 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
FGD4-209ENST00000497153 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
FGD4-209ENST00000497153 EIF4G1Q04637 1599 aaKnown RBP12.63□□□□□ -0.39
FGD4-209ENST00000497153 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
FGD4-209ENST00000497153 WIZO95785 1651 aa12.53□□□□□ -0.4
FGD4-209ENST00000497153 CC2D2AQ9P2K1 1620 aa12.52□□□□□ -0.4
FGD4-209ENST00000497153 SUPT5HO00267 1087 aaKnown RBP12.52□□□□□ -0.41
FGD4-209ENST00000497153 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
FGD4-209ENST00000497153 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
FGD4-209ENST00000497153 PEG3Q9GZU2 1588 aa12.44□□□□□ -0.42
FGD4-209ENST00000497153 BAZ1BQ9UIG0 1483 aaKnown RBP12.42□□□□□ -0.42
FGD4-209ENST00000497153 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
FGD4-209ENST00000497153 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
FGD4-209ENST00000497153 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
FGD4-209ENST00000497153 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
FGD4-209ENST00000497153 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
FGD4-209ENST00000497153 PHF23Q9BUL5 403 aaPredicted RBP12.31□□□□□ -0.44
FGD4-209ENST00000497153 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
FGD4-209ENST00000497153 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
FGD4-209ENST00000497153 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
FGD4-209ENST00000497153 NESP48681 1621 aa12.03□□□□□ -0.48
FGD4-209ENST00000497153 KIF21AQ7Z4S6 1674 aa12.01□□□□□ -0.49
FGD4-209ENST00000497153 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
FGD4-209ENST00000497153 CFTRP13569 1480 aa12□□□□□ -0.49
FGD4-209ENST00000497153 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
FGD4-209ENST00000497153 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
FGD4-209ENST00000497153 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
FGD4-209ENST00000497153 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
FGD4-209ENST00000497153 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
FGD4-209ENST00000497153 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
FGD4-209ENST00000497153 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
FGD4-209ENST00000497153 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
FGD4-209ENST00000497153 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
FGD4-209ENST00000497153 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
FGD4-209ENST00000497153 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
FGD4-209ENST00000497153 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
FGD4-209ENST00000497153 CUX1P39880 1505 aa11.81□□□□□ -0.52
FGD4-209ENST00000497153 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
FGD4-209ENST00000497153 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
FGD4-209ENST00000497153 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
FGD4-209ENST00000497153 WDR62O43379 1518 aa11.76□□□□□ -0.53
FGD4-209ENST00000497153 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
FGD4-209ENST00000497153 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
FGD4-209ENST00000497153 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
FGD4-209ENST00000497153 CUX2O14529 1486 aa11.64□□□□□ -0.55
FGD4-209ENST00000497153 RAD54L2Q9Y4B4 1467 aa11.64□□□□□ -0.55
FGD4-209ENST00000497153 TARBP1Q13395 1621 aaKnown RBP11.63□□□□□ -0.55
FGD4-209ENST00000497153 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
FGD4-209ENST00000497153 SOGA1O94964 1423 aa11.62□□□□□ -0.55
FGD4-209ENST00000497153 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
FGD4-209ENST00000497153 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
FGD4-209ENST00000497153 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
FGD4-209ENST00000497153 FAM9AQ8IZU1 332 aaPredicted RBP11.58□□□□□ -0.56
FGD4-209ENST00000497153 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
FGD4-209ENST00000497153 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
FGD4-209ENST00000497153 EEA1Q15075 1411 aa11.54□□□□□ -0.56
FGD4-209ENST00000497153 ZNF608Q9ULD9 1512 aaPredicted RBP11.54□□□□□ -0.56
FGD4-209ENST00000497153 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
FGD4-209ENST00000497153 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
FGD4-209ENST00000497153 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
FGD4-209ENST00000497153 CUL7Q14999 1698 aa11.52□□□□□ -0.57
FGD4-209ENST00000497153 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
FGD4-209ENST00000497153 GRIN2BQ13224 1484 aa11.48□□□□□ -0.57
FGD4-209ENST00000497153 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
FGD4-209ENST00000497153 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
FGD4-209ENST00000497153 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
FGD4-209ENST00000497153 KIF21BO75037 1637 aa11.46□□□□□ -0.57
FGD4-209ENST00000497153 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
FGD4-209ENST00000497153 CHD1O14646 1710 aa11.45□□□□□ -0.58
FGD4-209ENST00000497153 CSRNP3Q8WYN3 585 aa11.44□□□□□ -0.58
FGD4-209ENST00000497153 FOXD1Q16676 465 aa11.43□□□□□ -0.58
FGD4-209ENST00000497153 MAGI1Q96QZ7 1491 aaPredicted RBP11.43□□□□□ -0.58
FGD4-209ENST00000497153 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
FGD4-209ENST00000497153 GOLGA3Q08378 1498 aa11.41□□□□□ -0.58
FGD4-209ENST00000497153 IGF1RP08069 1367 aa11.4□□□□□ -0.59
FGD4-209ENST00000497153 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
FGD4-209ENST00000497153 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
FGD4-209ENST00000497153 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
FGD4-209ENST00000497153 FBLN2P98095 1184 aa11.38□□□□□ -0.59
FGD4-209ENST00000497153 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
FGD4-209ENST00000497153 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
FGD4-209ENST00000497153 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms