RNA–Protein interactions for RNA: ENST00000497110.1

PROM2-211, Transcript of prominin 2, humanhuman

TSL 4

Gene PROM2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-211ENST00000497110 NISCHQ9Y2I1 1504 aa28.09■■■□□ 2.09
PROM2-211ENST00000497110 CCDC180Q9P1Z9 1646 aa24.77■■□□□ 1.56
PROM2-211ENST00000497110 ABCC9O60706 1549 aa24.61■■□□□ 1.53
PROM2-211ENST00000497110 DNAJC5BQ9UF47 199 aa23.83■■□□□ 1.41
PROM2-211ENST00000497110 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
PROM2-211ENST00000497110 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
PROM2-211ENST00000497110 NACADO15069 1562 aa23.24■■□□□ 1.31
PROM2-211ENST00000497110 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
PROM2-211ENST00000497110 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
PROM2-211ENST00000497110 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
PROM2-211ENST00000497110 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
PROM2-211ENST00000497110 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
PROM2-211ENST00000497110 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
PROM2-211ENST00000497110 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
PROM2-211ENST00000497110 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
PROM2-211ENST00000497110 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
PROM2-211ENST00000497110 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
PROM2-211ENST00000497110 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
PROM2-211ENST00000497110 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
PROM2-211ENST00000497110 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.08
PROM2-211ENST00000497110 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
PROM2-211ENST00000497110 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
PROM2-211ENST00000497110 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
PROM2-211ENST00000497110 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
PROM2-211ENST00000497110 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
PROM2-211ENST00000497110 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
PROM2-211ENST00000497110 WIZO95785 1651 aa21.47■■□□□ 1.03
PROM2-211ENST00000497110 CUX2O14529 1486 aa21.46■■□□□ 1.03
PROM2-211ENST00000497110 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
PROM2-211ENST00000497110 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
PROM2-211ENST00000497110 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
PROM2-211ENST00000497110 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
PROM2-211ENST00000497110 ERCC6Q03468 1493 aa21.28■■□□□ 1
PROM2-211ENST00000497110 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
PROM2-211ENST00000497110 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
PROM2-211ENST00000497110 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
PROM2-211ENST00000497110 NESP48681 1621 aa20.89■□□□□ 0.94
PROM2-211ENST00000497110 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
PROM2-211ENST00000497110 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
PROM2-211ENST00000497110 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.92
PROM2-211ENST00000497110 CFTRP13569 1480 aa20.79■□□□□ 0.92
PROM2-211ENST00000497110 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
PROM2-211ENST00000497110 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
PROM2-211ENST00000497110 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.9
PROM2-211ENST00000497110 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
PROM2-211ENST00000497110 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
PROM2-211ENST00000497110 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
PROM2-211ENST00000497110 URB2Q14146 1524 aaKnown RBP20.38■□□□□ 0.85
PROM2-211ENST00000497110 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
PROM2-211ENST00000497110 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
PROM2-211ENST00000497110 WDR62O43379 1518 aa20.34■□□□□ 0.85
PROM2-211ENST00000497110 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
PROM2-211ENST00000497110 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
PROM2-211ENST00000497110 CUX1P39880 1505 aa20.3■□□□□ 0.84
PROM2-211ENST00000497110 RIMBP3CA6NJZ7 1639 aa20.29■□□□□ 0.84
PROM2-211ENST00000497110 RIMBP3BA6NNM3 1639 aa20.29■□□□□ 0.84
PROM2-211ENST00000497110 RIMBP3Q9UFD9 1639 aa20.29■□□□□ 0.84
PROM2-211ENST00000497110 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
PROM2-211ENST00000497110 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
PROM2-211ENST00000497110 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
PROM2-211ENST00000497110 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
PROM2-211ENST00000497110 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
PROM2-211ENST00000497110 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
PROM2-211ENST00000497110 SOGA1O94964 1423 aa20.18■□□□□ 0.82
PROM2-211ENST00000497110 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
PROM2-211ENST00000497110 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
PROM2-211ENST00000497110 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
PROM2-211ENST00000497110 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
PROM2-211ENST00000497110 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
PROM2-211ENST00000497110 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
PROM2-211ENST00000497110 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
PROM2-211ENST00000497110 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
PROM2-211ENST00000497110 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
PROM2-211ENST00000497110 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
PROM2-211ENST00000497110 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
PROM2-211ENST00000497110 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
PROM2-211ENST00000497110 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
PROM2-211ENST00000497110 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
PROM2-211ENST00000497110 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
PROM2-211ENST00000497110 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
PROM2-211ENST00000497110 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
PROM2-211ENST00000497110 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
PROM2-211ENST00000497110 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
PROM2-211ENST00000497110 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
PROM2-211ENST00000497110 FBLN2P98095 1184 aa19.83■□□□□ 0.77
PROM2-211ENST00000497110 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
PROM2-211ENST00000497110 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
PROM2-211ENST00000497110 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
PROM2-211ENST00000497110 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
PROM2-211ENST00000497110 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
PROM2-211ENST00000497110 IGF1RP08069 1367 aa19.76■□□□□ 0.75
PROM2-211ENST00000497110 EEA1Q15075 1411 aa19.75■□□□□ 0.75
PROM2-211ENST00000497110 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
PROM2-211ENST00000497110 CHD1O14646 1710 aa19.74■□□□□ 0.75
PROM2-211ENST00000497110 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
PROM2-211ENST00000497110 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
PROM2-211ENST00000497110 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
PROM2-211ENST00000497110 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
PROM2-211ENST00000497110 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
PROM2-211ENST00000497110 CUL7Q14999 1698 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms