RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
PPM1F-209ENST00000497072 CCDC180Q9P1Z9 1646 aa28■■■□□ 2.07
PPM1F-209ENST00000497072 ABCC9O60706 1549 aa27.83■■■□□ 2.05
PPM1F-209ENST00000497072 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
PPM1F-209ENST00000497072 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
PPM1F-209ENST00000497072 NACADO15069 1562 aa26.45■■□□□ 1.82
PPM1F-209ENST00000497072 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
PPM1F-209ENST00000497072 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.74
PPM1F-209ENST00000497072 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
PPM1F-209ENST00000497072 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
PPM1F-209ENST00000497072 DNAJC5BQ9UF47 199 aa25.85■■□□□ 1.73
PPM1F-209ENST00000497072 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
PPM1F-209ENST00000497072 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.71
PPM1F-209ENST00000497072 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
PPM1F-209ENST00000497072 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
PPM1F-209ENST00000497072 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
PPM1F-209ENST00000497072 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
PPM1F-209ENST00000497072 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
PPM1F-209ENST00000497072 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
PPM1F-209ENST00000497072 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
PPM1F-209ENST00000497072 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
PPM1F-209ENST00000497072 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
PPM1F-209ENST00000497072 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
PPM1F-209ENST00000497072 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
PPM1F-209ENST00000497072 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
PPM1F-209ENST00000497072 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
PPM1F-209ENST00000497072 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
PPM1F-209ENST00000497072 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
PPM1F-209ENST00000497072 CUX2O14529 1486 aa23.94■■□□□ 1.42
PPM1F-209ENST00000497072 NESP48681 1621 aa23.92■■□□□ 1.42
PPM1F-209ENST00000497072 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
PPM1F-209ENST00000497072 WIZO95785 1651 aa23.8■■□□□ 1.4
PPM1F-209ENST00000497072 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
PPM1F-209ENST00000497072 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
PPM1F-209ENST00000497072 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
PPM1F-209ENST00000497072 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
PPM1F-209ENST00000497072 THOC2Q8NI27 1593 aaKnown RBP23.63■■□□□ 1.37
PPM1F-209ENST00000497072 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
PPM1F-209ENST00000497072 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
PPM1F-209ENST00000497072 MRC2Q9UBG0 1479 aa23.48■■□□□ 1.35
PPM1F-209ENST00000497072 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
PPM1F-209ENST00000497072 CFTRP13569 1480 aa23.43■■□□□ 1.34
PPM1F-209ENST00000497072 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
PPM1F-209ENST00000497072 WDR62O43379 1518 aa23.38■■□□□ 1.33
PPM1F-209ENST00000497072 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
PPM1F-209ENST00000497072 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
PPM1F-209ENST00000497072 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
PPM1F-209ENST00000497072 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
PPM1F-209ENST00000497072 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
PPM1F-209ENST00000497072 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
PPM1F-209ENST00000497072 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
PPM1F-209ENST00000497072 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
PPM1F-209ENST00000497072 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
PPM1F-209ENST00000497072 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
PPM1F-209ENST00000497072 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
PPM1F-209ENST00000497072 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
PPM1F-209ENST00000497072 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
PPM1F-209ENST00000497072 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
PPM1F-209ENST00000497072 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.223e-11■■■■□ 22.3
PPM1F-209ENST00000497072 SOGA1O94964 1423 aa22.69■■□□□ 1.22
PPM1F-209ENST00000497072 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
PPM1F-209ENST00000497072 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
PPM1F-209ENST00000497072 CUX1P39880 1505 aa22.62■■□□□ 1.21
PPM1F-209ENST00000497072 FBLN2P98095 1184 aa22.61■■□□□ 1.21
PPM1F-209ENST00000497072 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
PPM1F-209ENST00000497072 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
PPM1F-209ENST00000497072 CHD1O14646 1710 aa22.54■■□□□ 1.2
PPM1F-209ENST00000497072 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
PPM1F-209ENST00000497072 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
PPM1F-209ENST00000497072 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
PPM1F-209ENST00000497072 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
PPM1F-209ENST00000497072 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
PPM1F-209ENST00000497072 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
PPM1F-209ENST00000497072 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
PPM1F-209ENST00000497072 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.18
PPM1F-209ENST00000497072 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
PPM1F-209ENST00000497072 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
PPM1F-209ENST00000497072 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
PPM1F-209ENST00000497072 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
PPM1F-209ENST00000497072 CYB5RLQ6IPT4 315 aa22.36■■□□□ 1.17
PPM1F-209ENST00000497072 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
PPM1F-209ENST00000497072 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
PPM1F-209ENST00000497072 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
PPM1F-209ENST00000497072 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
PPM1F-209ENST00000497072 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
PPM1F-209ENST00000497072 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
PPM1F-209ENST00000497072 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
PPM1F-209ENST00000497072 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
PPM1F-209ENST00000497072 ADAMTS12P58397 1594 aa22.15■■□□□ 1.14
PPM1F-209ENST00000497072 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
PPM1F-209ENST00000497072 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
PPM1F-209ENST00000497072 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
PPM1F-209ENST00000497072 NUP160Q12769 1436 aa22.05■■□□□ 1.12
PPM1F-209ENST00000497072 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
PPM1F-209ENST00000497072 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
PPM1F-209ENST00000497072 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
PPM1F-209ENST00000497072 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
PPM1F-209ENST00000497072 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
PPM1F-209ENST00000497072 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
PPM1F-209ENST00000497072 IGF1RP08069 1367 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 486.5 ms