RNA–Protein interactions for RNA: ENST00000496920.1

PTK2B-209, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 3

Gene PTK2B, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-209ENST00000496920 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
PTK2B-209ENST00000496920 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
PTK2B-209ENST00000496920 ABCC9O60706 1549 aa33.56■■■□□ 2.96
PTK2B-209ENST00000496920 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
PTK2B-209ENST00000496920 NACADO15069 1562 aa32.03■■■□□ 2.72
PTK2B-209ENST00000496920 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
PTK2B-209ENST00000496920 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
PTK2B-209ENST00000496920 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
PTK2B-209ENST00000496920 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
PTK2B-209ENST00000496920 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
PTK2B-209ENST00000496920 PABPN1Q86U42 306 aaKnown RBP eCLIP31.24■■■□□ 2.59
PTK2B-209ENST00000496920 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.58
PTK2B-209ENST00000496920 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
PTK2B-209ENST00000496920 SCRIBQ14160 1630 aa30.96■■■□□ 2.55
PTK2B-209ENST00000496920 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
PTK2B-209ENST00000496920 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
PTK2B-209ENST00000496920 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
PTK2B-209ENST00000496920 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
PTK2B-209ENST00000496920 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
PTK2B-209ENST00000496920 NCAPD3P42695 1498 aa29.49■■■□□ 2.31
PTK2B-209ENST00000496920 BAZ1AQ9NRL2 1556 aaPredicted RBP29.49■■■□□ 2.31
PTK2B-209ENST00000496920 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
PTK2B-209ENST00000496920 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
PTK2B-209ENST00000496920 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
PTK2B-209ENST00000496920 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.28
PTK2B-209ENST00000496920 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
PTK2B-209ENST00000496920 MROH2BQ7Z745 1585 aa29.21■■■□□ 2.27
PTK2B-209ENST00000496920 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
PTK2B-209ENST00000496920 WIZO95785 1651 aa28.94■■■□□ 2.22
PTK2B-209ENST00000496920 NESP48681 1621 aa28.9■■■□□ 2.22
PTK2B-209ENST00000496920 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
PTK2B-209ENST00000496920 CUX2O14529 1486 aa28.84■■■□□ 2.21
PTK2B-209ENST00000496920 RSF1Q96T23 1441 aaPredicted RBP28.71■■■□□ 2.19
PTK2B-209ENST00000496920 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
PTK2B-209ENST00000496920 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
PTK2B-209ENST00000496920 THOC2Q8NI27 1593 aaKnown RBP28.61■■■□□ 2.17
PTK2B-209ENST00000496920 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
PTK2B-209ENST00000496920 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
PTK2B-209ENST00000496920 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
PTK2B-209ENST00000496920 CFTRP13569 1480 aa28.36■■■□□ 2.13
PTK2B-209ENST00000496920 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
PTK2B-209ENST00000496920 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
PTK2B-209ENST00000496920 FANCD2Q9BXW9 1451 aa28.32■■■□□ 2.12
PTK2B-209ENST00000496920 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
PTK2B-209ENST00000496920 WDR62O43379 1518 aa28.29■■■□□ 2.12
PTK2B-209ENST00000496920 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
PTK2B-209ENST00000496920 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
PTK2B-209ENST00000496920 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
PTK2B-209ENST00000496920 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
PTK2B-209ENST00000496920 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
PTK2B-209ENST00000496920 IFT140Q96RY7 1462 aa27.75■■■□□ 2.03
PTK2B-209ENST00000496920 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
PTK2B-209ENST00000496920 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
PTK2B-209ENST00000496920 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
PTK2B-209ENST00000496920 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
PTK2B-209ENST00000496920 POLA1P09884 1462 aaPredicted RBP27.54■■■□□ 2
PTK2B-209ENST00000496920 OSCARQ8IYS5 282 aa27.54■■■□□ 2
PTK2B-209ENST00000496920 CUX1P39880 1505 aa27.44■■□□□ 1.98
PTK2B-209ENST00000496920 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
PTK2B-209ENST00000496920 SOGA1O94964 1423 aa27.42■■□□□ 1.98
PTK2B-209ENST00000496920 AQRO60306 1485 aaKnown RBP eCLIP27.4■■□□□ 1.98
PTK2B-209ENST00000496920 RAD54L2Q9Y4B4 1467 aa27.4■■□□□ 1.98
PTK2B-209ENST00000496920 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
PTK2B-209ENST00000496920 CHD1O14646 1710 aa27.35■■□□□ 1.97
PTK2B-209ENST00000496920 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
PTK2B-209ENST00000496920 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
PTK2B-209ENST00000496920 FBLN2P98095 1184 aa27.21■■□□□ 1.95
PTK2B-209ENST00000496920 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
PTK2B-209ENST00000496920 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
PTK2B-209ENST00000496920 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
PTK2B-209ENST00000496920 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
PTK2B-209ENST00000496920 GRIN2BQ13224 1484 aa27.18■■□□□ 1.94
PTK2B-209ENST00000496920 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
PTK2B-209ENST00000496920 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
PTK2B-209ENST00000496920 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
PTK2B-209ENST00000496920 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
PTK2B-209ENST00000496920 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
PTK2B-209ENST00000496920 WRNQ14191 1432 aaPredicted RBP eCLIP27.13■■□□□ 1.93
PTK2B-209ENST00000496920 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
PTK2B-209ENST00000496920 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
PTK2B-209ENST00000496920 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
PTK2B-209ENST00000496920 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
PTK2B-209ENST00000496920 CHMP7Q8WUX9 453 aaPredicted RBP27.07■■□□□ 1.92
PTK2B-209ENST00000496920 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
PTK2B-209ENST00000496920 CLASP1Q7Z460 1538 aa26.95■■□□□ 1.91
PTK2B-209ENST00000496920 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
PTK2B-209ENST00000496920 CYB5RLQ6IPT4 315 aa26.86■■□□□ 1.89
PTK2B-209ENST00000496920 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
PTK2B-209ENST00000496920 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
PTK2B-209ENST00000496920 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
PTK2B-209ENST00000496920 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
PTK2B-209ENST00000496920 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
PTK2B-209ENST00000496920 NUP160Q12769 1436 aa26.68■■□□□ 1.86
PTK2B-209ENST00000496920 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
PTK2B-209ENST00000496920 CUL7Q14999 1698 aa26.59■■□□□ 1.85
PTK2B-209ENST00000496920 SHROOM2Q13796 1616 aa26.58■■□□□ 1.85
PTK2B-209ENST00000496920 ERCC6L2Q5T890 1561 aa26.51■■□□□ 1.83
PTK2B-209ENST00000496920 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
PTK2B-209ENST00000496920 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
PTK2B-209ENST00000496920 IGF1RP08069 1367 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms