RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
ATPAF2-208ENST00000496852 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
ATPAF2-208ENST00000496852 ABCC9O60706 1549 aa27.97■■■□□ 2.07
ATPAF2-208ENST00000496852 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
ATPAF2-208ENST00000496852 DCAF1Q9Y4B6 1507 aa27.39■■□□□ 1.98
ATPAF2-208ENST00000496852 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
ATPAF2-208ENST00000496852 NACADO15069 1562 aa27.29■■□□□ 1.96
ATPAF2-208ENST00000496852 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
ATPAF2-208ENST00000496852 RB1CC1Q8TDY2 1594 aa27.19■■□□□ 1.94
ATPAF2-208ENST00000496852 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
ATPAF2-208ENST00000496852 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
ATPAF2-208ENST00000496852 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.81
ATPAF2-208ENST00000496852 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
ATPAF2-208ENST00000496852 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
ATPAF2-208ENST00000496852 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
ATPAF2-208ENST00000496852 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
ATPAF2-208ENST00000496852 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
ATPAF2-208ENST00000496852 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
ATPAF2-208ENST00000496852 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
ATPAF2-208ENST00000496852 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.65
ATPAF2-208ENST00000496852 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
ATPAF2-208ENST00000496852 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
ATPAF2-208ENST00000496852 WIZO95785 1651 aa25.3■■□□□ 1.64
ATPAF2-208ENST00000496852 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
ATPAF2-208ENST00000496852 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
ATPAF2-208ENST00000496852 DNAJC5BQ9UF47 199 aa25.14■■□□□ 1.62
ATPAF2-208ENST00000496852 NCAPD3P42695 1498 aa25.13■■□□□ 1.61
ATPAF2-208ENST00000496852 HMGXB3Q12766 1538 aa25.11■■□□□ 1.61
ATPAF2-208ENST00000496852 SUPT5HO00267 1087 aaKnown RBP25.07■■□□□ 1.6
ATPAF2-208ENST00000496852 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
ATPAF2-208ENST00000496852 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
ATPAF2-208ENST00000496852 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
ATPAF2-208ENST00000496852 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
ATPAF2-208ENST00000496852 LAMC3Q9Y6N6 1575 aa24.43■■□□□ 1.5
ATPAF2-208ENST00000496852 CFTRP13569 1480 aa24.41■■□□□ 1.5
ATPAF2-208ENST00000496852 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
ATPAF2-208ENST00000496852 NESP48681 1621 aa24.39■■□□□ 1.5
ATPAF2-208ENST00000496852 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
ATPAF2-208ENST00000496852 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
ATPAF2-208ENST00000496852 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
ATPAF2-208ENST00000496852 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.44
ATPAF2-208ENST00000496852 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
ATPAF2-208ENST00000496852 ABCC8Q09428 1581 aa24■■□□□ 1.43
ATPAF2-208ENST00000496852 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
ATPAF2-208ENST00000496852 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
ATPAF2-208ENST00000496852 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
ATPAF2-208ENST00000496852 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.42
ATPAF2-208ENST00000496852 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
ATPAF2-208ENST00000496852 CUX1P39880 1505 aa23.88■■□□□ 1.41
ATPAF2-208ENST00000496852 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
ATPAF2-208ENST00000496852 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
ATPAF2-208ENST00000496852 WDR62O43379 1518 aa23.87■■□□□ 1.41
ATPAF2-208ENST00000496852 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
ATPAF2-208ENST00000496852 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
ATPAF2-208ENST00000496852 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
ATPAF2-208ENST00000496852 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
ATPAF2-208ENST00000496852 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
ATPAF2-208ENST00000496852 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
ATPAF2-208ENST00000496852 CUX2O14529 1486 aa23.62■■□□□ 1.37
ATPAF2-208ENST00000496852 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
ATPAF2-208ENST00000496852 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
ATPAF2-208ENST00000496852 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
ATPAF2-208ENST00000496852 SOGA1O94964 1423 aa23.54■■□□□ 1.36
ATPAF2-208ENST00000496852 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
ATPAF2-208ENST00000496852 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
ATPAF2-208ENST00000496852 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
ATPAF2-208ENST00000496852 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
ATPAF2-208ENST00000496852 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.34
ATPAF2-208ENST00000496852 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
ATPAF2-208ENST00000496852 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
ATPAF2-208ENST00000496852 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
ATPAF2-208ENST00000496852 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
ATPAF2-208ENST00000496852 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.32
ATPAF2-208ENST00000496852 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
ATPAF2-208ENST00000496852 EEA1Q15075 1411 aa23.26■■□□□ 1.31
ATPAF2-208ENST00000496852 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
ATPAF2-208ENST00000496852 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
ATPAF2-208ENST00000496852 CUL7Q14999 1698 aa23.18■■□□□ 1.3
ATPAF2-208ENST00000496852 IGF1RP08069 1367 aa23.17■■□□□ 1.3
ATPAF2-208ENST00000496852 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
ATPAF2-208ENST00000496852 ADAMTS12P58397 1594 aa23.13■■□□□ 1.29
ATPAF2-208ENST00000496852 SNAPC4Q5SXM2 1469 aa23.13■■□□□ 1.29
ATPAF2-208ENST00000496852 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
ATPAF2-208ENST00000496852 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
ATPAF2-208ENST00000496852 KIF21BO75037 1637 aa23.06■■□□□ 1.28
ATPAF2-208ENST00000496852 CHD1O14646 1710 aa23.06■■□□□ 1.28
ATPAF2-208ENST00000496852 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
ATPAF2-208ENST00000496852 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
ATPAF2-208ENST00000496852 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
ATPAF2-208ENST00000496852 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
ATPAF2-208ENST00000496852 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
ATPAF2-208ENST00000496852 GRIN2AQ12879 1464 aa22.94■■□□□ 1.26
ATPAF2-208ENST00000496852 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
ATPAF2-208ENST00000496852 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
ATPAF2-208ENST00000496852 CTTNBP2Q8WZ74 1663 aa22.89■■□□□ 1.26
ATPAF2-208ENST00000496852 FBLN2P98095 1184 aa22.87■■□□□ 1.25
ATPAF2-208ENST00000496852 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
ATPAF2-208ENST00000496852 NUP160Q12769 1436 aa22.82■■□□□ 1.24
ATPAF2-208ENST00000496852 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
ATPAF2-208ENST00000496852 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms