RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
VPS72-206ENST00000496809 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
VPS72-206ENST00000496809 ABCC9O60706 1549 aa27.36■■□□□ 1.97
VPS72-206ENST00000496809 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
VPS72-206ENST00000496809 NACADO15069 1562 aa26.02■■□□□ 1.76
VPS72-206ENST00000496809 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
VPS72-206ENST00000496809 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
VPS72-206ENST00000496809 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
VPS72-206ENST00000496809 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
VPS72-206ENST00000496809 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
VPS72-206ENST00000496809 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
VPS72-206ENST00000496809 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
VPS72-206ENST00000496809 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
VPS72-206ENST00000496809 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
VPS72-206ENST00000496809 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
VPS72-206ENST00000496809 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
VPS72-206ENST00000496809 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
VPS72-206ENST00000496809 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
VPS72-206ENST00000496809 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
VPS72-206ENST00000496809 ATAD2BQ9ULI0 1458 aa23.92■■□□□ 1.42
VPS72-206ENST00000496809 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
VPS72-206ENST00000496809 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
VPS72-206ENST00000496809 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
VPS72-206ENST00000496809 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
VPS72-206ENST00000496809 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
VPS72-206ENST00000496809 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
VPS72-206ENST00000496809 ERCC6Q03468 1493 aa23.68■■□□□ 1.38
VPS72-206ENST00000496809 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
VPS72-206ENST00000496809 CUX2O14529 1486 aa23.61■■□□□ 1.37
VPS72-206ENST00000496809 NESP48681 1621 aa23.51■■□□□ 1.35
VPS72-206ENST00000496809 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
VPS72-206ENST00000496809 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
VPS72-206ENST00000496809 PDS5BQ9NTI5 1447 aa23.35■■□□□ 1.33
VPS72-206ENST00000496809 WIZO95785 1651 aa23.32■■□□□ 1.32
VPS72-206ENST00000496809 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
VPS72-206ENST00000496809 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
VPS72-206ENST00000496809 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
VPS72-206ENST00000496809 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
VPS72-206ENST00000496809 TOP2AP11388 1531 aaKnown RBP23.09■■□□□ 1.29
VPS72-206ENST00000496809 MRC2Q9UBG0 1479 aa23.09■■□□□ 1.29
VPS72-206ENST00000496809 CFTRP13569 1480 aa23.04■■□□□ 1.28
VPS72-206ENST00000496809 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
VPS72-206ENST00000496809 WDR62O43379 1518 aa23.01■■□□□ 1.27
VPS72-206ENST00000496809 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
VPS72-206ENST00000496809 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
VPS72-206ENST00000496809 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
VPS72-206ENST00000496809 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
VPS72-206ENST00000496809 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
VPS72-206ENST00000496809 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
VPS72-206ENST00000496809 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
VPS72-206ENST00000496809 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
VPS72-206ENST00000496809 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
VPS72-206ENST00000496809 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
VPS72-206ENST00000496809 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
VPS72-206ENST00000496809 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
VPS72-206ENST00000496809 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
VPS72-206ENST00000496809 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
VPS72-206ENST00000496809 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.164e-7■■■□□ 16.5
VPS72-206ENST00000496809 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
VPS72-206ENST00000496809 SOGA1O94964 1423 aa22.29■■□□□ 1.16
VPS72-206ENST00000496809 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
VPS72-206ENST00000496809 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
VPS72-206ENST00000496809 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
VPS72-206ENST00000496809 FBLN2P98095 1184 aa22.19■■□□□ 1.14
VPS72-206ENST00000496809 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
VPS72-206ENST00000496809 CUX1P39880 1505 aa22.18■■□□□ 1.14
VPS72-206ENST00000496809 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
VPS72-206ENST00000496809 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
VPS72-206ENST00000496809 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
VPS72-206ENST00000496809 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
VPS72-206ENST00000496809 CHD1O14646 1710 aa22.13■■□□□ 1.13
VPS72-206ENST00000496809 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
VPS72-206ENST00000496809 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
VPS72-206ENST00000496809 MAGI1Q96QZ7 1491 aaPredicted RBP22.08■■□□□ 1.12
VPS72-206ENST00000496809 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
VPS72-206ENST00000496809 CYB5RLQ6IPT4 315 aa22.01■■□□□ 1.11
VPS72-206ENST00000496809 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
VPS72-206ENST00000496809 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
VPS72-206ENST00000496809 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
VPS72-206ENST00000496809 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
VPS72-206ENST00000496809 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
VPS72-206ENST00000496809 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
VPS72-206ENST00000496809 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
VPS72-206ENST00000496809 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
VPS72-206ENST00000496809 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
VPS72-206ENST00000496809 TOP2BQ02880 1626 aa21.9■■□□□ 1.1
VPS72-206ENST00000496809 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
VPS72-206ENST00000496809 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
VPS72-206ENST00000496809 GRIN2AQ12879 1464 aa21.77■■□□□ 1.07
VPS72-206ENST00000496809 FHAD1B1AJZ9 1412 aa21.75■■□□□ 1.07
VPS72-206ENST00000496809 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
VPS72-206ENST00000496809 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
VPS72-206ENST00000496809 NUP160Q12769 1436 aa21.69■■□□□ 1.06
VPS72-206ENST00000496809 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
VPS72-206ENST00000496809 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
VPS72-206ENST00000496809 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
VPS72-206ENST00000496809 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
VPS72-206ENST00000496809 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
VPS72-206ENST00000496809 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
VPS72-206ENST00000496809 IGF1RP08069 1367 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms