RNA–Protein interactions for RNA: ENST00000496786.5

SPEG-222, Transcript of SPEG complex locus, humanhuman

TSL 4

Gene SPEG, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-222ENST00000496786 NISCHQ9Y2I1 1504 aa46.99■■■■■ 5.11
SPEG-222ENST00000496786 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
SPEG-222ENST00000496786 ABCC9O60706 1549 aa41.06■■■■■ 4.16
SPEG-222ENST00000496786 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
SPEG-222ENST00000496786 NACADO15069 1562 aa39.42■■■■□ 3.9
SPEG-222ENST00000496786 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
SPEG-222ENST00000496786 MYO15BQ96JP2 1530 aa39.15■■■■□ 3.86
SPEG-222ENST00000496786 ZCCHC6Q5VYS8 1495 aaKnown RBP39.12■■■■□ 3.85
SPEG-222ENST00000496786 DCAF1Q9Y4B6 1507 aa38.91■■■■□ 3.82
SPEG-222ENST00000496786 UNC13AQ9UPW8 1703 aa38.62■■■■□ 3.77
SPEG-222ENST00000496786 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
SPEG-222ENST00000496786 BICRAQ9NZM4 1560 aa38.27■■■■□ 3.72
SPEG-222ENST00000496786 SCRIBQ14160 1630 aa38.16■■■■□ 3.7
SPEG-222ENST00000496786 SHROOM4Q9ULL8 1493 aa37.93■■■■□ 3.66
SPEG-222ENST00000496786 DNAJC5BQ9UF47 199 aa37.77■■■■□ 3.64
SPEG-222ENST00000496786 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
SPEG-222ENST00000496786 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
SPEG-222ENST00000496786 CECR2Q9BXF3 1484 aa36.93■■■■□ 3.5
SPEG-222ENST00000496786 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
SPEG-222ENST00000496786 BAZ1AQ9NRL2 1556 aaPredicted RBP36.46■■■■□ 3.43
SPEG-222ENST00000496786 NCAPD3P42695 1498 aa36.34■■■■□ 3.41
SPEG-222ENST00000496786 ATAD2BQ9ULI0 1458 aa36.32■■■■□ 3.41
SPEG-222ENST00000496786 SMARCA2P51531 1590 aa36.32■■■■□ 3.4
SPEG-222ENST00000496786 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
SPEG-222ENST00000496786 HMGXB3Q12766 1538 aa36.18■■■■□ 3.38
SPEG-222ENST00000496786 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
SPEG-222ENST00000496786 BAZ1BQ9UIG0 1483 aaKnown RBP36.03■■■■□ 3.36
SPEG-222ENST00000496786 WIZO95785 1651 aa35.81■■■■□ 3.32
SPEG-222ENST00000496786 RSF1Q96T23 1441 aaPredicted RBP35.71■■■■□ 3.31
SPEG-222ENST00000496786 NESP48681 1621 aa35.48■■■■□ 3.27
SPEG-222ENST00000496786 LAMC3Q9Y6N6 1575 aa35.45■■■■□ 3.27
SPEG-222ENST00000496786 TOP2AP11388 1531 aaKnown RBP35.44■■■■□ 3.26
SPEG-222ENST00000496786 ERCC6Q03468 1493 aa35.43■■■■□ 3.26
SPEG-222ENST00000496786 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
SPEG-222ENST00000496786 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
SPEG-222ENST00000496786 CUX2O14529 1486 aa35.15■■■■□ 3.22
SPEG-222ENST00000496786 KIF21AQ7Z4S6 1674 aa35.11■■■■□ 3.21
SPEG-222ENST00000496786 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
SPEG-222ENST00000496786 CFTRP13569 1480 aa35.03■■■■□ 3.2
SPEG-222ENST00000496786 CCDC88BA6NC98 1476 aa34.98■■■■□ 3.19
SPEG-222ENST00000496786 FANCD2Q9BXW9 1451 aa34.86■■■■□ 3.17
SPEG-222ENST00000496786 CEP164Q9UPV0 1460 aa34.85■■■■□ 3.17
SPEG-222ENST00000496786 PRDM2Q13029 1718 aa34.84■■■■□ 3.17
SPEG-222ENST00000496786 MRC2Q9UBG0 1479 aa34.83■■■■□ 3.17
SPEG-222ENST00000496786 WDR62O43379 1518 aa34.73■■■■□ 3.15
SPEG-222ENST00000496786 SUPT5HO00267 1087 aaKnown RBP34.64■■■■□ 3.14
SPEG-222ENST00000496786 URB2Q14146 1524 aaKnown RBP34.51■■■■□ 3.12
SPEG-222ENST00000496786 ABCC8Q09428 1581 aa34.32■■■■□ 3.09
SPEG-222ENST00000496786 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
SPEG-222ENST00000496786 DNMBPQ6XZF7 1577 aa34.27■■■■□ 3.08
SPEG-222ENST00000496786 DNAJC5Q9H3Z4 198 aa34.19■■■■□ 3.06
SPEG-222ENST00000496786 IFT140Q96RY7 1462 aa34.13■■■■□ 3.05
SPEG-222ENST00000496786 POLA1P09884 1462 aaPredicted RBP33.99■■■■□ 3.03
SPEG-222ENST00000496786 CUX1P39880 1505 aa33.96■■■■□ 3.03
SPEG-222ENST00000496786 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
SPEG-222ENST00000496786 TARBP1Q13395 1621 aaKnown RBP33.94■■■■□ 3.02
SPEG-222ENST00000496786 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
SPEG-222ENST00000496786 EIF4G3O43432 1585 aaKnown RBP33.86■■■■□ 3.01
SPEG-222ENST00000496786 SOGA1O94964 1423 aa33.83■■■■□ 3.01
SPEG-222ENST00000496786 RAD54L2Q9Y4B4 1467 aa33.81■■■■□ 3
SPEG-222ENST00000496786 WDR97A6NE52 1622 aa33.73■■■□□ 2.99
SPEG-222ENST00000496786 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.99
SPEG-222ENST00000496786 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.98
SPEG-222ENST00000496786 BIVM-ERCC5R4GMW8 1640 aa33.68■■■□□ 2.98
SPEG-222ENST00000496786 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
SPEG-222ENST00000496786 TDRD9Q8NDG6 1382 aaKnown RBP33.63■■■□□ 2.97
SPEG-222ENST00000496786 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
SPEG-222ENST00000496786 OSCARQ8IYS5 282 aa33.61■■■□□ 2.97
SPEG-222ENST00000496786 ABCA10Q8WWZ4 1543 aa33.56■■■□□ 2.96
SPEG-222ENST00000496786 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
SPEG-222ENST00000496786 CHD1O14646 1710 aa33.48■■■□□ 2.95
SPEG-222ENST00000496786 ABCA5Q8WWZ7 1642 aa33.46■■■□□ 2.95
SPEG-222ENST00000496786 GAPVD1Q14C86 1478 aa33.45■■■□□ 2.95
SPEG-222ENST00000496786 PBRM1Q86U86 1689 aa33.45■■■□□ 2.94
SPEG-222ENST00000496786 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
SPEG-222ENST00000496786 MAGI1Q96QZ7 1491 aaPredicted RBP33.43■■■□□ 2.94
SPEG-222ENST00000496786 FBLN2P98095 1184 aa33.34■■■□□ 2.93
SPEG-222ENST00000496786 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
SPEG-222ENST00000496786 CHMP7Q8WUX9 453 aaPredicted RBP33.25■■■□□ 2.91
SPEG-222ENST00000496786 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
SPEG-222ENST00000496786 ADAMTS12P58397 1594 aa33.14■■■□□ 2.9
SPEG-222ENST00000496786 RIMBP3CA6NJZ7 1639 aa33.13■■■□□ 2.89
SPEG-222ENST00000496786 RIMBP3BA6NNM3 1639 aa33.13■■■□□ 2.89
SPEG-222ENST00000496786 RIMBP3Q9UFD9 1639 aa33.13■■■□□ 2.89
SPEG-222ENST00000496786 ARHGEF11O15085 1522 aa33.09■■■□□ 2.89
SPEG-222ENST00000496786 CLASP1Q7Z460 1538 aa33.09■■■□□ 2.89
SPEG-222ENST00000496786 FHAD1B1AJZ9 1412 aa33.07■■■□□ 2.88
SPEG-222ENST00000496786 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
SPEG-222ENST00000496786 KIF27Q86VH2 1401 aa33.01■■■□□ 2.87
SPEG-222ENST00000496786 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
SPEG-222ENST00000496786 NUP160Q12769 1436 aa32.9■■■□□ 2.86
SPEG-222ENST00000496786 CEP170Q5SW79 1584 aa32.88■■■□□ 2.85
SPEG-222ENST00000496786 CUL7Q14999 1698 aa32.87■■■□□ 2.85
SPEG-222ENST00000496786 IGF1RP08069 1367 aa32.86■■■□□ 2.85
SPEG-222ENST00000496786 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
SPEG-222ENST00000496786 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
SPEG-222ENST00000496786 SHROOM2Q13796 1616 aa32.7■■■□□ 2.83
SPEG-222ENST00000496786 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
SPEG-222ENST00000496786 RUSC2Q8N2Y8 1516 aa32.67■■■□□ 2.82
SPEG-222ENST00000496786 ERCC6L2Q5T890 1561 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms