RNA–Protein interactions for RNA: ENST00000496612.5

PHF11-217, Transcript of PHD finger protein 11, humanhuman

TSL 3

Gene PHF11, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-217ENST00000496612 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
PHF11-217ENST00000496612 ABCC9O60706 1549 aa36.64■■■■□ 3.46
PHF11-217ENST00000496612 CCDC180Q9P1Z9 1646 aa35.64■■■■□ 3.3
PHF11-217ENST00000496612 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
PHF11-217ENST00000496612 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
PHF11-217ENST00000496612 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
PHF11-217ENST00000496612 NACADO15069 1562 aa33.89■■■■□ 3.02
PHF11-217ENST00000496612 UNC13AQ9UPW8 1703 aa33.72■■■□□ 2.99
PHF11-217ENST00000496612 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
PHF11-217ENST00000496612 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
PHF11-217ENST00000496612 CECR2Q9BXF3 1484 aa33.09■■■□□ 2.89
PHF11-217ENST00000496612 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
PHF11-217ENST00000496612 CC2D2AQ9P2K1 1620 aa33.06■■■□□ 2.88
PHF11-217ENST00000496612 DNAJC5Q9H3Z4 198 aa33.02■■■□□ 2.88
PHF11-217ENST00000496612 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
PHF11-217ENST00000496612 EIF4G1Q04637 1599 aaKnown RBP32.72■■■□□ 2.83
PHF11-217ENST00000496612 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
PHF11-217ENST00000496612 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
PHF11-217ENST00000496612 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
PHF11-217ENST00000496612 CUX2O14529 1486 aa31.93■■■□□ 2.7
PHF11-217ENST00000496612 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
PHF11-217ENST00000496612 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
PHF11-217ENST00000496612 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
PHF11-217ENST00000496612 NESP48681 1621 aa31.21■■■□□ 2.59
PHF11-217ENST00000496612 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
PHF11-217ENST00000496612 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
PHF11-217ENST00000496612 HMGXB3Q12766 1538 aa30.99■■■□□ 2.55
PHF11-217ENST00000496612 SMARCA2P51531 1590 aa30.93■■■□□ 2.54
PHF11-217ENST00000496612 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
PHF11-217ENST00000496612 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
PHF11-217ENST00000496612 LAMC3Q9Y6N6 1575 aa30.77■■■□□ 2.52
PHF11-217ENST00000496612 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
PHF11-217ENST00000496612 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
PHF11-217ENST00000496612 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
PHF11-217ENST00000496612 BAZ1AQ9NRL2 1556 aaPredicted RBP30.5■■■□□ 2.47
PHF11-217ENST00000496612 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
PHF11-217ENST00000496612 WDR62O43379 1518 aa30.41■■■□□ 2.46
PHF11-217ENST00000496612 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
PHF11-217ENST00000496612 OSCARQ8IYS5 282 aa30.28■■■□□ 2.44
PHF11-217ENST00000496612 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
PHF11-217ENST00000496612 CEP164Q9UPV0 1460 aa30.12■■■□□ 2.41
PHF11-217ENST00000496612 RIMBP3CA6NJZ7 1639 aa30.1■■■□□ 2.41
PHF11-217ENST00000496612 RIMBP3BA6NNM3 1639 aa30.1■■■□□ 2.41
PHF11-217ENST00000496612 RIMBP3Q9UFD9 1639 aa30.1■■■□□ 2.41
PHF11-217ENST00000496612 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
PHF11-217ENST00000496612 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
PHF11-217ENST00000496612 WIZO95785 1651 aa29.87■■■□□ 2.37
PHF11-217ENST00000496612 URB2Q14146 1524 aaKnown RBP29.84■■■□□ 2.37
PHF11-217ENST00000496612 CFTRP13569 1480 aa29.75■■■□□ 2.35
PHF11-217ENST00000496612 TRHP20396 242 aaPredicted RBP29.68■■■□□ 2.34
PHF11-217ENST00000496612 CYB5RLQ6IPT4 315 aa29.68■■■□□ 2.34
PHF11-217ENST00000496612 ZNF608Q9ULD9 1512 aaPredicted RBP29.65■■■□□ 2.34
PHF11-217ENST00000496612 AEBP2Q6ZN18 517 aaPredicted RBP29.54■■■□□ 2.32
PHF11-217ENST00000496612 IFT140Q96RY7 1462 aa29.54■■■□□ 2.32
PHF11-217ENST00000496612 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
PHF11-217ENST00000496612 PRDM2Q13029 1718 aa29.45■■■□□ 2.31
PHF11-217ENST00000496612 EIF4G3O43432 1585 aaKnown RBP29.44■■■□□ 2.3
PHF11-217ENST00000496612 CHD1O14646 1710 aa29.44■■■□□ 2.3
PHF11-217ENST00000496612 TOP2AP11388 1531 aaKnown RBP29.38■■■□□ 2.29
PHF11-217ENST00000496612 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
PHF11-217ENST00000496612 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
PHF11-217ENST00000496612 FBLN2P98095 1184 aa29.23■■■□□ 2.27
PHF11-217ENST00000496612 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.27
PHF11-217ENST00000496612 TARBP1Q13395 1621 aaKnown RBP29.15■■■□□ 2.26
PHF11-217ENST00000496612 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
PHF11-217ENST00000496612 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
PHF11-217ENST00000496612 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
PHF11-217ENST00000496612 CLASP1Q7Z460 1538 aa29.02■■■□□ 2.24
PHF11-217ENST00000496612 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
PHF11-217ENST00000496612 SNAPC4Q5SXM2 1469 aa28.91■■■□□ 2.22
PHF11-217ENST00000496612 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
PHF11-217ENST00000496612 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
PHF11-217ENST00000496612 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
PHF11-217ENST00000496612 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
PHF11-217ENST00000496612 SOGA1O94964 1423 aa28.78■■■□□ 2.2
PHF11-217ENST00000496612 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
PHF11-217ENST00000496612 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
PHF11-217ENST00000496612 WDR97A6NE52 1622 aa28.73■■■□□ 2.19
PHF11-217ENST00000496612 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
PHF11-217ENST00000496612 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
PHF11-217ENST00000496612 GRIN2BQ13224 1484 aa28.65■■■□□ 2.18
PHF11-217ENST00000496612 PBRM1Q86U86 1689 aa28.55■■■□□ 2.16
PHF11-217ENST00000496612 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
PHF11-217ENST00000496612 CUX1P39880 1505 aa28.48■■■□□ 2.15
PHF11-217ENST00000496612 KIF13AQ9H1H9 1805 aa28.48■■■□□ 2.15
PHF11-217ENST00000496612 ILDR1Q86SU0 546 aaPredicted RBP28.4■■■□□ 2.14
PHF11-217ENST00000496612 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
PHF11-217ENST00000496612 ABCA5Q8WWZ7 1642 aa28.33■■■□□ 2.13
PHF11-217ENST00000496612 GRIN2AQ12879 1464 aa28.3■■■□□ 2.12
PHF11-217ENST00000496612 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
PHF11-217ENST00000496612 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
PHF11-217ENST00000496612 NUP160Q12769 1436 aa28.23■■■□□ 2.11
PHF11-217ENST00000496612 KDM4FA0A1W2PPD8 638 aa28.22■■■□□ 2.11
PHF11-217ENST00000496612 ADAMTS12P58397 1594 aa28.2■■■□□ 2.1
PHF11-217ENST00000496612 FAM69CQ0P6D2 419 aa28.15■■■□□ 2.1
PHF11-217ENST00000496612 ABCC10Q5T3U5 1492 aa28.13■■■□□ 2.09
PHF11-217ENST00000496612 KDM6BO15054 1643 aa28.1■■■□□ 2.09
PHF11-217ENST00000496612 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
PHF11-217ENST00000496612 PRG4Q92954 1404 aaPredicted RBP28.05■■■□□ 2.08
PHF11-217ENST00000496612 MAPKBP1O60336 1514 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms